RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 CENPVL1A0A0U1RR11 272 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 SERINC4A6NH21 518 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 SAGE2PA6NJ88 616 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 CLDN24A6NM45 220 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 MPZL2O60487 215 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 FOXD2O60548 495 aaPredicted RBP12.72□□□□□ -0.37
TPM1-215ENST00000558868 TPST2O60704 377 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 CBFA2T3O75081 653 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 CCDC159P0C7I6 412 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 CDK4P11802 303 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 CCL4P13236 92 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 HPGDP15428 266 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 ADH7P40394 386 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 CRISP1P54107 249 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 GABARAPL2P60520 117 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 CXCR4P61073 352 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 TEKQ02763 1124 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 NNATQ16517 81 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 CSRP2Q16527 193 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 MRPL14Q6P1L8 145 aaKnown RBP12.72□□□□□ -0.37
TPM1-215ENST00000558868 C1orf94Q6P1W5 598 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 KLHL17Q6TDP4 642 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 SHISA6Q6ZSJ9 500 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 LANCL3Q6ZV70 420 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 GDF7Q7Z4P5 450 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 CPEB2Q7Z5Q1 589 aaKnown RBP12.72□□□□□ -0.37
TPM1-215ENST00000558868 ZAR1Q86SH2 424 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 RNF113BQ8IZP6 322 aaKnown RBP12.72□□□□□ -0.37
TPM1-215ENST00000558868 SLC34A3Q8N130 599 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 ZNF321PQ8N8H1 164 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 B3GNT7Q8NFL0 401 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 ZNF566Q969W8 418 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 TP53INP1Q96A56 240 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 GAL3ST4Q96RP7 486 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 LPAR4Q99677 370 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 ULBP3Q9BZM4 244 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 SEMA4CQ9C0C4 833 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 WWTR1Q9GZV5 400 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 NXF5Q9H1B4 397 aaKnown RBP12.72□□□□□ -0.37
TPM1-215ENST00000558868 ADNPQ9H2P0 1102 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 POLR1BQ9H9Y6 1135 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 SEMA4GQ9NTN9 838 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 SCN3BQ9NY72 215 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 PPIEQ9UNP9 301 aaKnown RBP12.72□□□□□ -0.37
TPM1-215ENST00000558868 LOXL2Q9Y4K0 774 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 PCDHGA1Q9Y5H4 931 aa12.72□□□□□ -0.37
TPM1-215ENST00000558868 FASNP49327 2511 aaKnown RBP12.72□□□□□ -0.37
TPM1-215ENST00000558868 RALGAPA1Q6GYQ0 2036 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 A0A087WUU8 490 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 DPPA5A6NC42 116 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 SCDO00767 359 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 POU2F1P14859 743 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 ATP6V1B1P15313 513 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 TBXA2RP21731 343 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 IL12BP29460 328 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 HLCSP50747 726 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 EFNA3P52797 238 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 NRG3P56975 720 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 CDC42P60953 191 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 FOXD4Q12950 439 aaPredicted RBP12.71□□□□□ -0.37
TPM1-215ENST00000558868 CDK5R2Q13319 367 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 OR1Q1Q15612 314 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 MEP1AQ16819 746 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 KLHL26Q53HC5 615 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 FAAH2Q6GMR7 532 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 TMEM205Q6UW68 189 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 HSDL2Q6YN16 418 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 MBOAT2Q6ZWT7 520 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 C9orf40Q8IXQ3 194 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 ZSCAN1Q8NBB4 408 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 OR5L2Q8NGL0 311 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 CNOT9Q92600 299 aaKnown RBP12.71□□□□□ -0.37
TPM1-215ENST00000558868 MR1Q95460 341 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 VMP1Q96GC9 406 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 LIN37Q96GY3 246 aaPredicted RBP12.71□□□□□ -0.37
TPM1-215ENST00000558868 HS6ST2Q96MM7 605 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 SPSB2Q99619 263 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 VCX3AQ9NNX9 186 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 CTPS2Q9NRF8 586 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 IMPAD1Q9NX62 359 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 DNAJB12Q9NXW2 375 aaKnown RBP12.71□□□□□ -0.37
TPM1-215ENST00000558868 SELENONQ9NZV5 590 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 TPRKBQ9Y3C4 175 aa12.71□□□□□ -0.37
TPM1-215ENST00000558868 USP24Q9UPU5 2620 aa12.71□□□□□ -0.38
TPM1-215ENST00000558868 SEC16AO15027 2179 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 CACNA1HO95180 2353 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 SMIM31A0A1B0GVY4 71 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 TRIM64CA6NLI5 447 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 ZAR1LA6NP61 321 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 REM1O75628 298 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 UTS2O95399 124 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 ANGPTL1O95841 491 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 CSTAP01040 98 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 IGHEP01854 428 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 NGFRP08138 427 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 GKN3PP0CG01 181 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 EEF1B2P24534 225 aaKnown RBP12.7□□□□□ -0.38
TPM1-215ENST00000558868 ELK4P28324 431 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 STAT5AP42229 794 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 GPR143P51810 404 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms