RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431	ZNF814	B7Z6K7	855 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	NDUFS8	O00217	210 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	KCNAB3	O43448	404 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	SLITRK5	O94991	958 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	C2	P06681	752 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	GSTA2	P09210	222 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	PTAFR	P25105	342 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	SFTPD	P35247	375 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	PDLIM4	P50479	330 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	CR1L	Q2VPA4	569 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	GGTA1P	Q4G0N0	100 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	IQCC	Q4KMZ1	466 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	ZNF544	Q6NX49	715 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	FCRLA	Q7L513	359 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	CENPL	Q8N0S6	344 aa	Predicted RBP	11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	SLC43A2	Q8N370	569 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	ACTRT2	Q8TDY3	377 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	C1orf159	Q96HA4	380 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	MED17	Q9NVC6	651 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	DDX18	Q9NVP1	670 aa	Known RBP	11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	TMCO1	Q9UM00	188 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	FKBP7	Q9Y680	259 aa		11.11	□□□□□ -0.63
DDX41-215	ENST00000512431	GOLGA8Q	A0A0J9YX86	632 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	GOLGA8O	A6NCC3	632 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	GOLGA8N	F8WBI6	632 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	GOLGA8R	I6L899	631 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	EIF3H	O15372	352 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	PCDH7	O60245	1069 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	KLHL2	O95198	593 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	OTC	P00480	354 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	CTAGE8	P0CG41	777 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	COL6A2	P12110	1019 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	HPGD	P15428	266 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	PSMA4	P25789	261 aa	Known RBP	11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	EIF1	P41567	113 aa	Known RBP	11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	NR4A2	P43354	598 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	NCBP2	P52298	156 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	SLC18A2	Q05940	514 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	TRAF3	Q13114	568 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	PLPPR5	Q32ZL2	321 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	GRAMD1B	Q3KR37	738 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	APOOL	Q6UXV4	268 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	CTAGE4	Q8IX94	777 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	MMGT1	Q8N4V1	131 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	C3orf56	Q8N813	242 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	NPAS1	Q99742	590 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	PRR14	Q9BWN1	585 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	DMGDH	Q9UI17	866 aa	Known RBP	11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	PCTP	Q9UKL6	214 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.1	□□□□□ -0.63
DDX41-215	ENST00000512431	SNX24	Q9Y343	169 aa		11.1	□□□□□ -0.63
DDX41-215	ENST00000512431		A0A096LPK6	155 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	OR5H1	A6NKK0	313 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	TTC36	A6NLP5	189 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	ALG1L2	C9J202	215 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	TP73	O15350	636 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	SMIM24	O75264	130 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	JUN	P05412	331 aa	Known RBP	11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	HSD3B1	P14060	373 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	HSD3B2	P26439	372 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	GABRA3	P34903	492 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	OR3A2	P47893	321 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	MANF	P55145	182 aa	Known RBP	11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	CALCOCO2	Q13137	446 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	CARTPT	Q16568	116 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	ARL13A	Q5H913	290 aa	Predicted RBP	11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	MROH9	Q5TGP6	573 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	TMEM107	Q6UX40	140 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	GATS	Q8NAP1	163 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	ZNF540	Q8NDQ6	660 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	FAM110B	Q8TC76	370 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	NSUN5	Q96P11	429 aa	Known RBP	11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	INPP5K	Q9BT40	448 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	TRMO	Q9BU70	441 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	SRXN1	Q9BYN0	137 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	MYNN	Q9NPC7	610 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	NPAP1	Q9NZP6	1156 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	KLHL9	Q9P2J3	617 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	PRSS50	Q9UI38	385 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	ATP23	Q9Y6H3	246 aa		11.09	□□□□□ -0.63
DDX41-215	ENST00000512431	YLPM1	P49750	1951 aa	Known RBP	11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	CIB4	A0PJX0	185 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	MYO1G	B0I1T2	1018 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	VWC2L	B2RUY7	222 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	STX16-NPEPL1	H3BU86	382 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	UPK1A	O00322	258 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	STX16	O14662	325 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	LY6H	O94772	140 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	OXSR1	O95747	527 aa	Predicted RBP	11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	RBP1	P09455	135 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	TCP1	P17987	556 aa	Known RBP	11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	EGR1	P18146	543 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	CD40	P25942	277 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	ELK4	P28324	431 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	STX2	P32856	288 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	GSTM5	P46439	218 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	ZNF83	P51522	516 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	NAB1	Q13506	487 aa		11.08	□□□□□ -0.64
DDX41-215	ENST00000512431	SLC29A2	Q14542	456 aa		11.08	□□□□□ -0.64

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