RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ABHD3Q8WU67 409 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 SELENOMQ8WWX9 145 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 KISS1RQ969F8 398 aaPredicted RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 PHF21BQ96EK2 531 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 RNF145Q96MT1 663 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 CACNG6Q9BXT2 260 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 POTEKPQ9BYX7 375 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 TBL1XR1Q9BZK7 514 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 SHARPINQ9H0F6 387 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 TMEM185BQ9H7F4 350 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 SLC35C2Q9NQQ7 365 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 FAIMQ9NVQ4 179 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 FBXO34Q9NWN3 711 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 PAQR5Q9NXK6 330 aaPredicted RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 CISD1Q9NZ45 108 aaKnown RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 KLHL13Q9P2N7 655 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 STOML1Q9UBI4 398 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 VPS29Q9UBQ0 182 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 ZNF225Q9UK10 706 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 VDAC3Q9Y277 283 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 B3GALT5Q9Y2C3 310 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 ZNF281Q9Y2X9 895 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 SNX24Q9Y343 169 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 VWFP04275 2813 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 A0A096LPK6 155 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 A0A0G2JK05 382 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 GOLGA8QA0A0J9YX86 632 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 A0A1W2PNR3 127 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 A0A1W2PRB8 838 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 GOLGA8OA6NCC3 632 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 MYO1GB0I1T2 1018 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 ALG1L2C9J202 215 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 GOLGA8NF8WBI6 632 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 GOLGA8RI6L899 631 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 UPK1AO00322 258 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 PPP6CO00743 305 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 ABCD4O14678 606 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 PCDH7O60245 1069 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 DLX3O60479 287 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 LMX1BO60663 402 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 UTS2O95399 124 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 ESRRBO95718 433 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 OTCP00480 354 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 ADAP00813 363 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 IGKV1D-16P01601 117 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 FESP07332 822 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 RPS17P08708 135 aaKnown RBP4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 FAM157BP0CG42 384 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 CHN1P15882 459 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 SLC25A16P16260 332 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 PTNP21246 168 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 ME2P23368 584 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 SHC1P29353 583 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 STX2P32856 288 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 MPIP34949 423 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 RFX3P48380 749 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 CLK3P49761 638 aaKnown RBP4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 MRPS25P82663 173 aaKnown RBP4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 CSTF3Q12996 717 aaKnown RBP4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 ITGADQ13349 1161 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 NAB1Q13506 487 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 HEPACAMQ14CZ8 416 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 P2RY6Q15077 328 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 PRSS53Q2L4Q9 553 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 PLPPR5Q32ZL2 321 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 GRAMD1BQ3KR37 738 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 TCHHL1Q5QJ38 904 aaPredicted RBP4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 TMEM201Q5SNT2 666 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 SAMD5Q5TGI4 173 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 AGAP6Q5VW22 663 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 CYB5R2Q6BCY4 276 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 GTF2IRD2BQ6EKJ0 949 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 TMEM107Q6UX40 140 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 Q6ZT83 130 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 IL17RELQ6ZVW7 336 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 BHLHA15Q7RTS1 189 aaPredicted RBP4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 GTF2IRD2Q86UP8 949 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 CCDC25Q86WR0 208 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 TUSC5Q8IXB3 177 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 FAM9CQ8IZT9 166 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 PLD6Q8N2A8 252 aaKnown RBP4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 C10orf105Q8TEF2 133 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 FBF1Q8TES7 1133 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 ZNF483Q8TF39 744 aaPredicted RBP4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 C16orf78Q8WTQ4 265 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 SLC9A6Q92581 669 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 HTRA1Q92743 480 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 OSTF1Q92882 214 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 ZBTB8AQ96BR9 441 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 ADAD1Q96M93 576 aaKnown RBP4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 KLHL15Q96M94 604 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 DMRTB1Q96MA1 342 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 BBS4Q96RK4 519 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 KLHDC3Q9BQ90 382 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 ERP44Q9BS26 406 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 LMF2Q9BU23 707 aaKnown RBP4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 SRXN1Q9BYN0 137 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 SHCBP1LQ9BZQ2 653 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 DPH5Q9H2P9 285 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 MANSC1Q9H8J5 431 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms