RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 PLEKHA1Q9HB21 404 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 DMRT3Q9NQL9 472 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 TEX10Q9NXF1 929 aaPredicted RBP13.19□□□□□ -0.3
TOP3B-214ENST00000457270 NKIRAS2Q9NYR9 191 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 ABRACLQ9P1F3 81 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 FLVCR2Q9UPI3 526 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 NINQ8N4C6 2090 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 GSAPA4D1B5 854 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 NPIPB15A6NHN6 443 aaPredicted RBP13.19□□□□□ -0.3
TOP3B-214ENST00000457270 PGRMC2O15173 223 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 AQP8O94778 261 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 SLCO2B1O94956 709 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 GDNFP39905 211 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 KCNJ3P48549 501 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 VEGFCP49767 419 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 CCR9P51686 369 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 SERTAD2Q14140 314 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 SLC25A35Q3KQZ1 300 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 ZNF528Q3MIS6 628 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 HES5Q5TA89 166 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 CRTC1Q6UUV9 634 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 OR5P2Q8WZ92 322 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 MRPL48Q96GC5 212 aaKnown RBP13.19□□□□□ -0.3
TOP3B-214ENST00000457270 NARS2Q96I59 477 aaKnown RBP13.19□□□□□ -0.3
TOP3B-214ENST00000457270 CMSS1Q9BQ75 279 aaKnown RBP13.19□□□□□ -0.3
TOP3B-214ENST00000457270 CFAP97Q9P2B7 532 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 OR51B4Q9Y5P0 310 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 PRR23D1E9PI22 279 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-214ENST00000457270 TMEM189-UBE2V1I3L0A0 370 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 MID1O15344 667 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 IL3P08700 152 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 PRR23D2P0DMB1 279 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-214ENST00000457270 CORO1AP31146 461 aaKnown RBP13.18□□□□□ -0.3
TOP3B-214ENST00000457270 MAPK8P45983 427 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 CCR8P51685 355 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 ZNF124Q15973 351 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 ADGRF1Q5T601 910 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 GSG1LQ6UXU4 331 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 DBX2Q6ZNG2 339 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 GPR142Q7Z601 462 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 TEX19Q8NA77 164 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 RAB8BQ92930 207 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 ECHDC3Q96DC8 303 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 WDR34Q96EX3 536 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 TIMP4Q99727 224 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 TEX12Q9BXU0 123 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.18□□□□□ -0.33e-9■■■■■ 34.7
TOP3B-214ENST00000457270 MIEF1Q9NQG6 463 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 EXOSC3Q9NQT5 275 aaKnown RBP13.18□□□□□ -0.3
TOP3B-214ENST00000457270 MED11Q9P086 117 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 CKAP5Q14008 2032 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 A0A1B0GW55 424 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 SC5DO75845 299 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 CTSHP09668 335 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 DUX4L2P0CJ85 424 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 DUX4L3P0CJ86 424 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 DUX4L4P0CJ87 422 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 DUX4L5P0CJ88 424 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 DUX4L6P0CJ89 424 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 DUX4L7P0CJ90 424 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 TYRP1P17643 537 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 VIPR1P32241 457 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 ATP6V1E1P36543 226 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 CSNK1DP48730 415 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 PSMA6P60900 246 aaKnown RBP13.18□□□□□ -0.3
TOP3B-214ENST00000457270 CNTN1Q12860 1018 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 SERPINA13PQ6UXR4 307 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 ASZ1Q8WWH4 475 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 NEIL2Q969S2 332 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 UTP23Q9BRU9 249 aaKnown RBP13.18□□□□□ -0.3
TOP3B-214ENST00000457270 CRB3Q9BUF7 120 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 DDX31Q9H8H2 851 aaKnown RBP13.18□□□□□ -0.3
TOP3B-214ENST00000457270 HRASLSQ9HDD0 168 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 TRIM36Q9NQ86 728 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 DUX4Q9UBX2 424 aa13.18□□□□□ -0.3
TOP3B-214ENST00000457270 MRTO4Q9UKD2 239 aaKnown RBP13.18□□□□□ -0.3
TOP3B-214ENST00000457270 A0A087WUU8 490 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 SNRPGP15A8MWD9 76 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 PLPP2O43688 288 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 HTR3BO95264 441 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 SMIM6P0DI80 62 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 LGALS3BPQ08380 585 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 IRF5Q13568 498 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 FAM27D1Q5T7N8 215 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 OR5M10Q6IEU7 315 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 SIRT6Q8N6T7 355 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 OR4Q3Q8NH05 313 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 GSDMCQ9BYG8 508 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 SLC25A32Q9H2D1 315 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 ANKRD19PQ9H560 264 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 EQTNQ9NQ60 294 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 PRDM9Q9NQV7 894 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 SPHK1Q9NYA1 384 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 TAS2R5Q9NYW4 299 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 AKAP7Q9P0M2 348 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-214ENST00000457270 OR6C75A6NL08 312 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 K7ERQ8 282 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 KPNA3O00505 521 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-214ENST00000457270 STC2O76061 302 aa13.17□□□□□ -0.3
TOP3B-214ENST00000457270 KLK1P06870 262 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 227.3 ms