RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 SAGE2PA6NJ88 616 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 MMP11P24347 488 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 CRHBPP24387 322 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 HTR2AP28223 471 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 SLC5A2P31639 672 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 HLCSP50747 726 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 RNF144AP50876 292 aaPredicted RBP16.73■□□□□ 0.27
VIM-201ENST00000224237 CRISP1P54107 249 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 NR1H2P55055 460 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 E2F1Q01094 437 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 OR1Q1Q15612 314 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 CCDC71Q8IV32 467 aaPredicted RBP16.73■□□□□ 0.27
VIM-201ENST00000224237 ZNF527Q8NB42 609 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 B3GNT7Q8NFL0 401 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 CNOT9Q92600 299 aaKnown RBP16.73■□□□□ 0.27
VIM-201ENST00000224237 ZNF566Q969W8 418 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 DGCR14Q96DF8 476 aaKnown RBP16.73■□□□□ 0.27
VIM-201ENST00000224237 LMF1Q96S06 567 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 CDC6Q99741 560 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 ZNF559Q9BR84 538 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 MESP1Q9BRJ9 268 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 CRB3Q9BUF7 120 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 ULBP3Q9BZM4 244 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 AKIRIN1Q9H9L7 192 aaPredicted RBP16.73■□□□□ 0.27
VIM-201ENST00000224237 SLC7A7Q9UM01 511 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 TO15178 435 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 PRKNO60260 465 aaPredicted RBP16.72■□□□□ 0.27
VIM-201ENST00000224237 CNOT3O75175 753 aaKnown RBP16.72■□□□□ 0.27
VIM-201ENST00000224237 BCAS1O75363 584 aaPredicted RBP16.72■□□□□ 0.27
VIM-201ENST00000224237 ANGPTL1O95841 491 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 THY1P04216 161 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 CCDC159P0C7I6 412 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 GSTM3P21266 225 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 CHMP24386 653 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 LCN1P31025 176 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 GPR143P51810 404 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 CDH15P55291 814 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 PSPHP78330 225 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 MAD2L1BPQ15013 274 aaPredicted RBP16.72■□□□□ 0.27
VIM-201ENST00000224237 PTGES3Q15185 160 aaKnown RBP16.72■□□□□ 0.27
VIM-201ENST00000224237 Q6ZPB1 254 aaPredicted RBP16.72■□□□□ 0.27
VIM-201ENST00000224237 ZNF550Q7Z398 422 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 NKAIN4Q8IVV8 208 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 DEPDC4Q8N2C3 294 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 OR4C3Q8NH37 302 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 CNIH3Q8TBE1 160 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 FAM81AQ8TBF8 368 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 SEMA4CQ9C0C4 833 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 UBQLN4Q9NRR5 601 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 REV1Q9UBZ9 1251 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 C19orf25Q9UFG5 118 aaPredicted RBP16.72■□□□□ 0.27
VIM-201ENST00000224237 GPN3Q9UHW5 284 aaPredicted RBP16.72■□□□□ 0.27
VIM-201ENST00000224237 SLC35A3Q9Y2D2 325 aa16.72■□□□□ 0.27
VIM-201ENST00000224237 IGHV3-20A0A0C4DH32 117 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 SERINC4A6NH21 518 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 TRIM64CA6NLI5 447 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 TMX2-CTNND1H3BSU7 103 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 SLC1A7O00341 560 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 RFPL3O75679 317 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 ITIH1P19827 911 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 GSSP48637 474 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 RAB15P59190 212 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 GABARAPL2P60520 117 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 CXCR4P61073 352 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 LAIR2Q6ISS4 152 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 ZNF613Q6PF04 617 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 SATL1Q86VE3 508 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 ENTHD1Q8IYW4 607 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 PIGXQ8TBF5 258 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 HSPBAP1Q96EW2 488 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 TMEM27Q9HBJ8 222 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 KRCC1Q9NPI7 259 aaPredicted RBP16.71■□□□□ 0.27
VIM-201ENST00000224237 PPIEQ9UNP9 301 aaKnown RBP16.71■□□□□ 0.27
VIM-201ENST00000224237 PMS2P1A4D2B8 440 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 ZAR1LA6NP61 321 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 CSTAP01040 98 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 HPGDP15428 266 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 EEF1B2P24534 225 aaKnown RBP16.71■□□□□ 0.27
VIM-201ENST00000224237 KRT20P35900 424 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 IDH2P48735 452 aaKnown RBP16.71■□□□□ 0.27
VIM-201ENST00000224237 NR0B1P51843 470 aaKnown RBP16.71■□□□□ 0.27
VIM-201ENST00000224237 CDC42P60953 191 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 LSM11P83369 360 aaKnown RBP eCLIP16.71■□□□□ 0.27
VIM-201ENST00000224237 ALDH6A1Q02252 535 aaKnown RBP16.71■□□□□ 0.27
VIM-201ENST00000224237 KLHL26Q53HC5 615 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 TMEM205Q6UW68 189 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 MBOAT2Q6ZWT7 520 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 ZNF441Q8N8Z8 693 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 GNPDA2Q8TDQ7 276 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 LPAR4Q99677 370 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 LOXL2Q9Y4K0 774 aa16.71■□□□□ 0.27
VIM-201ENST00000224237 C9J4A7 227 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 H3BN98 237 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 SCDO00767 359 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 AHCYL1O43865 530 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 IL12BP29460 328 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 ADH7P40394 386 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 INSM1Q01101 510 aaPredicted RBP16.7■□□□□ 0.26
VIM-201ENST00000224237 CNPY1Q3B7I2 92 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 DCAF12Q5T6F0 453 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms