RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ZNF440Q8IYI8 595 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 DEPDC4Q8N2C3 294 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 ZNF527Q8NB42 609 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 SLC38A9Q8NBW4 561 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 OR9Q2Q8NGE9 314 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 DIO2Q92813 273 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 WFDC6Q9BQY6 131 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 ZPBPQ9BS86 351 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 EDEM2Q9BV94 578 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 WDR54Q9H977 334 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 APMAPQ9HDC9 416 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 SLC39A1Q9NY26 324 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 DTX4Q9Y2E6 619 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 CHST2Q9Y4C5 530 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 VPS13AQ96RL7 3174 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 TRAPPC13A5PLN9 417 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 A6NHS1 94 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 CPSF4LA6NMK7 179 aaKnown RBP12.74□□□□□ -0.37
TPM1-215ENST00000558868 IDSB3KWA1 339 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 C9J4A7 227 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 NPIPB9F8W1W9 429 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 CDX4O14627 284 aaPredicted RBP12.74□□□□□ -0.37
TPM1-215ENST00000558868 TO15178 435 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 LRP3O75074 770 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 IL33O95760 270 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 GASTP01350 101 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 IGKV1D-16P01601 117 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 CYP4B1P13584 511 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 CLK3P49761 638 aaKnown RBP12.74□□□□□ -0.37
TPM1-215ENST00000558868 IL5RAQ01344 420 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 FGFBP1Q14512 234 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 SF3A2Q15428 464 aaKnown RBP12.74□□□□□ -0.37
TPM1-215ENST00000558868 PDZK1Q5T2W1 519 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 CD300LDQ6UXZ3 194 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 ANKRD37Q7Z713 158 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 C17orf47Q8NEP4 570 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 OR4N2Q8NGD1 307 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 SLC7A13Q8TCU3 470 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 GNPDA2Q8TDQ7 276 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 GTPBP3Q969Y2 492 aaKnown RBP12.74□□□□□ -0.37
TPM1-215ENST00000558868 HSPBAP1Q96EW2 488 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 SLC41A3Q96GZ6 507 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 HRASLS5Q96KN8 279 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 PRRX2Q99811 253 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 CTRCQ99895 268 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 NIPSNAP1Q9BPW8 284 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 NUDT9Q9BW91 350 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 TMEM27Q9HBJ8 222 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 RLIMQ9NVW2 624 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 KCNE5Q9UJ90 142 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 SLC35A3Q9Y2D2 325 aa12.74□□□□□ -0.37
TPM1-215ENST00000558868 RIF1Q5UIP0 2472 aaKnown RBP12.73□□□□□ -0.37
TPM1-215ENST00000558868 ANKRD11Q6UB99 2663 aaPredicted RBP12.73□□□□□ -0.37
TPM1-215ENST00000558868 NPIPA5A0A0B4J1W7 369 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 TRIM64A6NGJ6 449 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 NPIPA7E9PJI5 369 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 E9PQ18 207 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 AGRPO00253 132 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 FRS3O43559 492 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 RFPL3O75679 317 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 SMNDC1O75940 238 aaKnown RBP eCLIP12.73□□□□□ -0.37
TPM1-215ENST00000558868 SMIM18P0DKX4 95 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 NPIPA8P0DM63 369 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 OSMP13725 252 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 ENDOUP21128 410 aaKnown RBP12.73□□□□□ -0.37
TPM1-215ENST00000558868 SLC5A2P31639 672 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 GGT2P36268 569 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 POLR2IP36954 125 aaKnown RBP12.73□□□□□ -0.37
TPM1-215ENST00000558868 RPL5P46777 297 aaKnown RBP12.73□□□□□ -0.37
TPM1-215ENST00000558868 ZNF136P52737 540 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 NR1H2P55055 460 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 ISL1P61371 349 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 CSNK2BP67870 215 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 ALDH6A1Q02252 535 aaKnown RBP12.73□□□□□ -0.37
TPM1-215ENST00000558868 CD47Q08722 323 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 TARDBPQ13148 414 aaKnown RBP eCLIP12.73□□□□□ -0.37
TPM1-215ENST00000558868 RAPSNQ13702 412 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 APOFQ13790 326 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 EBPQ15125 230 aaKnown RBP12.73□□□□□ -0.37
TPM1-215ENST00000558868 SEC23BQ15437 767 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 C6orf141Q5SZD1 244 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 DCAF12Q5T6F0 453 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 PGBD2Q6P3X8 592 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 ZNF613Q6PF04 617 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 ZNF730Q6ZMV8 503 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 ZNF614Q8N883 585 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 SUMF1Q8NBK3 374 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 OR4K5Q8NGD3 323 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 PIGXQ8TBF5 258 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 ADAMTS16Q8TE57 1224 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 FBLIM1Q8WUP2 373 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 ACOT11Q8WXI4 607 aaPredicted RBP12.73□□□□□ -0.37
TPM1-215ENST00000558868 ADIPOR1Q96A54 375 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 CRB3Q9BUF7 120 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 TRIM2Q9C040 744 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 FAM192AQ9GZU8 254 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 UBQLN4Q9NRR5 601 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 MAN2C1Q9NTJ4 1040 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 NDUFA13Q9P0J0 144 aa12.73□□□□□ -0.37
TPM1-215ENST00000558868 NINQ8N4C6 2090 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms