RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PLAG1Q6DJT9 500 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 BHLHB9Q6PI77 547 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 KIRREL2Q6UWL6 708 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 TMEM64Q6YI46 380 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 SHISA6Q6ZSJ9 500 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 NDUFAF7Q7L592 441 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 CPEB2Q7Z5Q1 589 aaKnown RBP5.32□□□□□ -1.56
SCAF11-213ENST00000550629 ANKRD37Q7Z713 158 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 PRIMA1Q86XR5 153 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 FUNDC1Q8IVP5 155 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 PRSS58Q8IYP2 241 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 MMP21Q8N119 569 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 LNX2Q8N448 690 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 DPP10Q8N608 796 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 SIMC1Q8NDZ2 872 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 OR7G1Q8NGA0 311 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 OR11G2Q8NGC1 345 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 GOT1L1Q8NHS2 421 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-213ENST00000550629 RP9Q8TA86 221 aaKnown RBP5.32□□□□□ -1.56
SCAF11-213ENST00000550629 SUN3Q8TAQ9 357 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 PTPMT1Q8WUK0 201 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-213ENST00000550629 SLC9A6Q92581 669 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 RIT1Q92963 219 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 EXOSC8Q96B26 276 aaKnown RBP5.32□□□□□ -1.56
SCAF11-213ENST00000550629 CTHRC1Q96CG8 243 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 SPDL1Q96EA4 605 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 CNRIP1Q96F85 164 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-213ENST00000550629 ITCHQ96J02 903 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 ART5Q96L15 291 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 MARK4Q96L34 752 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 TEX37Q96LM6 180 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 DGAT2Q96PD7 388 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 OR52E6Q96RD3 313 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 LPAR4Q99677 370 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 TUBB6Q9BUF5 446 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 SLC52A3Q9NQ40 469 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 NECTIN3Q9NQS3 549 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 TAS2R9Q9NYW1 312 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 SH3BP4Q9P0V3 963 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 IL17BQ9UHF5 180 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 BTNL2Q9UIR0 455 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 PCDHGB4Q9UN71 923 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 MAN2B2Q9Y2E5 1009 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 GMEB1Q9Y692 573 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 CLCA3PQ9Y6N3 262 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 KNTC1P50748 2209 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 PCSK5Q92824 1860 aa5.32□□□□□ -1.56
SCAF11-213ENST00000550629 SPTBN2O15020 2390 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 CHD8Q9HCK8 2581 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 SDK2Q58EX2 2172 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 NUP210LQ5VU65 1888 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 A0A096LPI6 279 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 IGHV1-45A0A0A0MS14 117 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 NSG1A0A0A6YYJ2 146 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 A0A1W2PS29 197 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 SAGE2PA6NJ88 616 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 TTC36A6NLP5 189 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 OR6C76A6NM76 312 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 C17orf105B2RV13 164 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 F2RL2O00254 374 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 NR5A2O00482 541 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 SOCS6O14544 535 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 ANGPT2O15123 496 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 TLX3O43711 291 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 PRAMEF2O60811 474 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 SCN2BO60939 215 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 PRKRAO75569 313 aaKnown RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 PSMG1O95456 288 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 HPP00738 406 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 IGKV3-11P04433 115 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 IFNA16P05015 189 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 SERPINA7P05543 415 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 COX6A1P12074 109 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 TNNI3P19429 210 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 F8A1P23610 371 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 IL12AP29459 219 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 FEN1P39748 380 aaKnown RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 PTH2RP49190 550 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 NCBP2P52298 156 aaKnown RBP eCLIP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 EFNA3P52797 238 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 DGKQP52824 942 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 NME5P56597 212 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 WNT3P56703 355 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 SOX8P57073 446 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 TXNL4AP83876 142 aaKnown RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 TLE3Q04726 772 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 FUT7Q11130 342 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 CYLC2Q14093 348 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 ZNF169Q14929 603 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 KIF26BQ2KJY2 2108 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 MPEG1Q2M385 716 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 PRICKLE4Q2TBC4 344 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 ZNF628Q5EBL2 1059 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 FHL5Q5TD97 284 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 OR4F3Q6IEY1 312 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 ANKRD26P1Q6NSI1 321 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 JMJD6Q6NYC1 403 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 PAPD4Q6PIY7 484 aaKnown RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 LANCL3Q6ZV70 420 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 VASH2Q86V25 355 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms