RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ETFAP13804 333 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 PPIBP23284 216 aaKnown RBP16.55■□□□□ 0.24
VEGFA-222ENST00000520948 PTGER4P35408 488 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 RFX3P48380 749 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 ANXA11P50995 505 aaKnown RBP16.55■□□□□ 0.24
VEGFA-222ENST00000520948 CASP6P55212 293 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 ADORA2A-AS1P86434 159 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 FADDQ13158 208 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 NFYCQ13952 458 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 FAM91A1Q658Y4 838 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 REP15Q6BDI9 236 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 ANGPTL8Q6UXH0 198 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 SIAH3Q8IW03 269 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 C10orf111Q8N326 155 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 POU5F2Q8N7G0 328 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 LURAP1Q96LR2 239 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 CPPED1Q9BRF8 314 aaPredicted RBP16.55■□□□□ 0.24
VEGFA-222ENST00000520948 DOHHQ9BU89 302 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 OSBPL11Q9BXB4 747 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 TTTY12Q9BZ98 90 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 ZNF350Q9GZX5 532 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 RAD21L1Q9H4I0 556 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 METTL7AQ9H8H3 244 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 GALNT9Q9HCQ5 603 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 CHST11Q9NPF2 352 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 UBQLN4Q9NRR5 601 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 LIPT1Q9Y234 373 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 LRRC3CA6NJW4 275 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 ALG1L2C9J202 215 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 MRASO14807 208 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 HS6ST1O60243 411 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 STX11O75558 287 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 DCTN3O75935 186 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 OXSR1O95747 527 aaPredicted RBP16.54■□□□□ 0.24
VEGFA-222ENST00000520948 TFPTP0C1Z6 253 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 PRDX6P30041 224 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 EVI2BP34910 448 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 CRATP43155 626 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 KCNJ2P63252 427 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 CDSNQ15517 529 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 SYPL1Q16563 259 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.54■□□□□ 0.241e-13■□□□□ 11.3
VEGFA-222ENST00000520948 TRMT5Q32P41 509 aaKnown RBP16.54■□□□□ 0.24
VEGFA-222ENST00000520948 ATAD3BQ5T9A4 648 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 WDSUB1Q8N9V3 476 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 ROPN1LQ96C74 230 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 LRRC58Q96CX6 371 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 TRNT1Q96Q11 434 aaKnown RBP16.54■□□□□ 0.24
VEGFA-222ENST00000520948 LRRC37BQ96QE4 947 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 HOXD1Q9GZZ0 328 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 ZFP64Q9NPA5 681 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 POLE3Q9NRF9 147 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 THUMPD1Q9NXG2 353 aaKnown RBP16.54■□□□□ 0.24
VEGFA-222ENST00000520948 KCNE5Q9UJ90 142 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 HRH3Q9Y5N1 445 aa16.54■□□□□ 0.24
VEGFA-222ENST00000520948 NCOA6Q14686 2063 aaPredicted RBP16.54■□□□□ 0.24
VEGFA-222ENST00000520948 NCKAP5O14513 1909 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 A0A1W2PQD3 144 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 C2orf72A6NCS6 295 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 B4DXG7 233 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 ZNHIT1O43257 154 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 RFPL3SP0C7P2 107 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 ESRRAP11474 423 aaPredicted RBP16.53■□□□□ 0.24
VEGFA-222ENST00000520948 RFC3P40938 356 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 ATP12AP54707 1039 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 DSTNP60981 165 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 SELPLGQ14242 412 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 ZNF141Q15928 474 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 MMEL1Q495T6 779 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 KLHL26Q53HC5 615 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 TIGD3Q6B0B8 471 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 TYW3Q6IPR3 259 aaKnown RBP16.53■□□□□ 0.24
VEGFA-222ENST00000520948 NANOGP8Q6NSW7 305 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 FRRS1Q6ZNA5 592 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 NCCRP1Q6ZVX7 275 aaPredicted RBP16.53■□□□□ 0.24
VEGFA-222ENST00000520948 OLIG3Q7RTU3 272 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 C16orf62Q7Z3J2 963 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 MARCH3Q86UD3 253 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 PACS2Q86VP3 889 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 ANKFN1Q8N957 763 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 CCDC197Q8NCU1 140 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 TRIM8Q9BZR9 551 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 SLC38A1Q9H2H9 487 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 NANOGQ9H9S0 305 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 KLRF1Q9NZS2 232 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 ITGB1BP2Q9UKP3 347 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 WIF1Q9Y5W5 379 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 PKDREJQ9NTG1 2253 aa16.53■□□□□ 0.24
VEGFA-222ENST00000520948 PCNX1Q96RV3 2341 aa16.52■□□□□ 0.24
VEGFA-222ENST00000520948 EVPLLA8MZ36 301 aa16.52■□□□□ 0.24
VEGFA-222ENST00000520948 NPIPA5E9PKD4 350 aa16.52■□□□□ 0.24
VEGFA-222ENST00000520948 C19orf84I3L1E1 186 aa16.52■□□□□ 0.24
VEGFA-222ENST00000520948 SNPHO15079 494 aa16.52■□□□□ 0.24
VEGFA-222ENST00000520948 NUDT7P0C024 238 aa16.52■□□□□ 0.24
VEGFA-222ENST00000520948 ATP6V1C1P21283 382 aa16.52■□□□□ 0.24
VEGFA-222ENST00000520948 PPIAP62937 165 aaKnown RBP16.52■□□□□ 0.24
VEGFA-222ENST00000520948 ALDH6A1Q02252 535 aaKnown RBP16.52■□□□□ 0.24
VEGFA-222ENST00000520948 CAPRIN1Q14444 709 aaKnown RBP16.52■□□□□ 0.24
VEGFA-222ENST00000520948 XKRXQ6PP77 449 aa16.52■□□□□ 0.24
VEGFA-222ENST00000520948 LRRC74BQ6ZQY2 392 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms