RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 KLHDC8AQ8IYD2 350 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 TMEFF1Q8IYR6 380 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 OR4Q3Q8NH05 313 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 OR10G6Q8NH81 332 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 FANK1Q8TC84 345 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 ZMYND19Q96E35 227 aaPredicted RBP11.9□□□□□ -0.5
VPS52-218ENST00000482399 SLC41A3Q96GZ6 507 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 FCRL1Q96LA6 429 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 COQ10AQ96MF6 247 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 AMDHD1Q96NU7 426 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 CD180Q99467 661 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 TTYH1Q9H313 450 aaPredicted RBP11.9□□□□□ -0.5
VPS52-218ENST00000482399 A4GALTQ9NPC4 353 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 ZSCAN32Q9NX65 697 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 NFKBIL1Q9UBC1 381 aaPredicted RBP11.9□□□□□ -0.5
VPS52-218ENST00000482399 CDV3Q9UKY7 258 aaKnown RBP11.9□□□□□ -0.5
VPS52-218ENST00000482399 SCN10AQ9Y5Y9 1956 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 FXYD6-FXYD2A0A087WZ82 144 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 PRAMEF27A3QJZ7 478 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 ANKRD61A6NGH8 418 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 FMO6PO60774 539 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 SLC19A2O60779 497 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 TCRBP04435 133 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 LCN1P31025 176 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 CCR2P41597 374 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 LIMS1P48059 325 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 AGFG1P52594 562 aaKnown RBP11.89□□□□□ -0.51
VPS52-218ENST00000482399 E2F1Q01094 437 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 GPR155Q7Z3F1 870 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 ABHD1Q96SE0 405 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 ORAI3Q9BRQ5 295 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 GPR174Q9BXC1 333 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 RNF32Q9H0A6 362 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 FXYD6Q9H0Q3 95 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 BABAM2Q9NXR7 383 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 MARK1Q9P0L2 795 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 TMEM129A0AVI4 362 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 RIIAD1A6NNX1 92 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 E9PI62 339 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 RNF13O43567 381 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 RPN2P04844 631 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 TRHRP34981 398 aaPredicted RBP11.89□□□□□ -0.51
VPS52-218ENST00000482399 DEFB103AP81534 67 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 HSF2Q03933 536 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 PGGHGQ32M88 737 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 ACSM3Q53FZ2 586 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 SFXN4Q6P4A7 337 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 ZNF322Q6U7Q0 402 aaPredicted RBP11.89□□□□□ -0.51
VPS52-218ENST00000482399 IKBIPQ70UQ0 350 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 ARL14Q8N4G2 192 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 BOLLQ8N9W6 283 aaKnown RBP11.89□□□□□ -0.51
VPS52-218ENST00000482399 C1orf216Q8TAB5 229 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 ELMOD3Q96FG2 381 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 CAMK1GQ96NX5 476 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 HHIPQ96QV1 700 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 GTPBP2Q9BX10 602 aaKnown RBP11.89□□□□□ -0.51
VPS52-218ENST00000482399 MS4A8Q9BY19 250 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 PIGUQ9H490 435 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 MRPS30Q9NP92 439 aaKnown RBP11.89□□□□□ -0.51
VPS52-218ENST00000482399 PRKAG2Q9UGJ0 569 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 GNG8Q9UK08 70 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 ANTXRLA6NF34 631 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 LEUTXA8MZ59 168 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 CHP2O43745 196 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 SOX30O94993 753 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 TP53P04637 393 aaPredicted RBP11.89□□□□□ -0.51
VPS52-218ENST00000482399 HMGN1P05114 100 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 IRS1P35568 1242 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 MAZP56270 477 aaKnown RBP11.89□□□□□ -0.51
VPS52-218ENST00000482399 PDE7AQ13946 482 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 ELOAQ14241 798 aaKnown RBP11.89□□□□□ -0.51
VPS52-218ENST00000482399 CCSAPQ6IQ19 270 aaPredicted RBP11.89□□□□□ -0.51
VPS52-218ENST00000482399 ADIPOR2Q86V24 386 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 TCEAL8Q8IYN2 117 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 SLC16A11Q8NCK7 471 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 HCAR2Q8TDS4 363 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 OR8D1Q8WZ84 308 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 SUSD6Q92537 303 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 ZNF559Q9BR84 538 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 ZDHHC5Q9C0B5 715 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 OR52D1Q9H346 318 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 RANBP3Q9H6Z4 567 aaPredicted RBP11.89□□□□□ -0.51
VPS52-218ENST00000482399 PPP1R3EQ9H7J1 279 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 KRCC1Q9NPI7 259 aaPredicted RBP11.89□□□□□ -0.51
VPS52-218ENST00000482399 UBQLN2Q9UHD9 624 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 KCND3Q9UK17 655 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 FBXL4Q9UKA2 621 aa11.89□□□□□ -0.51
VPS52-218ENST00000482399 RGS11O94810 467 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 LATS1O95835 1130 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 MT-ND5P03915 603 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 CCR4P51679 360 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 AKR1D1P51857 326 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 TSPAN31Q12999 210 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 NNATQ16517 81 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 C19orf48Q6RUI8 117 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 FRRS1Q6ZNA5 592 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 SLC44A3Q8N4M1 653 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 PXYLP1Q8TE99 480 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 CDS1Q92903 461 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 DTD2Q96FN9 168 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms