RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 RBM45Q8IUH3 476 aaKnown RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 ADGRG5Q8IZF4 528 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 TAGAPQ8N103 731 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 SLC34A3Q8N130 599 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 EID3Q8N140 333 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 ZNF619Q8N2I2 560 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 GALNT16Q8N428 558 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 SIRT6Q8N6T7 355 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 KDF1Q8NAX2 398 aaPredicted RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 SMYD1Q8NB12 490 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 GOLM1Q8NBJ4 401 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 BHLHE22Q8NFJ8 381 aaPredicted RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 BBS10Q8TAM1 723 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 BRIX1Q8TDN6 353 aaKnown RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 GRHL3Q8TE85 626 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 DUSP19Q8WTR2 217 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 SNRNP27Q8WVK2 155 aaKnown RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 TTC9Q92623 222 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 HAS2Q92819 552 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 EFHD2Q96C19 240 aaPredicted RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 CCDC124Q96CT7 223 aaKnown RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 NSMCE2Q96MF7 247 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 FRMD6Q96NE9 622 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 COL21A1Q96P44 957 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 GAL3ST4Q96RP7 486 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 ZNF607Q96SK3 696 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 G6PC3Q9BUM1 346 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 SPATA5L1Q9BVQ7 753 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 CHID1Q9BWS9 393 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 HOXD1Q9GZZ0 328 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 RLIMQ9NVW2 624 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 PLA2G3Q9NZ20 509 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 MAGEL2Q9UJ55 1249 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 MRTO4Q9UKD2 239 aaKnown RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 RAXQ9Y2V3 346 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 IFT52Q9Y366 437 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 DTNAQ9Y4J8 743 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 CROCCQ5TZA2 2017 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 CCDC88CQ9P219 2028 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 FREM2Q5SZK8 3169 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 AHCTF1Q8WYP5 2266 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 A0A1W2PQD3 144 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 CDHR4A6H8M9 788 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 ANKRD33BA6NCL7 494 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 TMEM247A6NEH6 219 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 ALG1L2C9J202 215 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 CDK2AP1O14519 115 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 FFAR1O14842 300 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 RRP8O43159 456 aaKnown RBP5.45□□□□□ -1.54
USP39-213ENST00000467885 SUV39H1O43463 412 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 OIP5O43482 229 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 KIAA0513O60268 411 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 ADAM11O75078 769 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 ICOSLGO75144 302 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 GMNNO75496 209 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 NEURL1O76050 574 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 PDE9AO76083 593 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 OXSR1O95747 527 aaPredicted RBP5.45□□□□□ -1.54
USP39-213ENST00000467885 IFNA14P01570 189 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 OPN1SWP03999 348 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 DBIP07108 87 aaKnown RBP5.45□□□□□ -1.54
USP39-213ENST00000467885 THBS1P07996 1170 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 PRG2P13727 222 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 TNFRSF1BP20333 461 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 CNR1P21554 472 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 SLC7A1P30825 629 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 PRKAR1BP31321 381 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 CASP3P42574 277 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 OR1E2P47887 323 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 ZNF136P52737 540 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 HMGA2P52926 109 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 RRADP55042 308 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 NRG3P56975 720 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 AP2B1P63010 937 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 CDC20Q12834 499 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 RIPK1Q13546 671 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 FGFBP1Q14512 234 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 INPP5JQ15735 1006 aaPredicted RBP5.45□□□□□ -1.54
USP39-213ENST00000467885 MEP1AQ16819 746 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 FLYWCH1Q4VC44 716 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 ZNF311Q5JNZ3 666 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 PDZK1Q5T2W1 519 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 SLC22A10Q63ZE4 541 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 SPINK14Q6IE38 97 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 TMEM81Q6P7N7 255 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 AAGABQ6PD74 315 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 CCDC81Q6ZN84 652 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 ERMP1Q7Z2K6 904 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 PIWIL3Q7Z3Z3 882 aaKnown RBP5.45□□□□□ -1.54
USP39-213ENST00000467885 MDGA2Q7Z553 956 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 VTCN1Q7Z7D3 282 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 TSPYL5Q86VY4 417 aaPredicted RBP5.45□□□□□ -1.54
USP39-213ENST00000467885 KRT73Q86Y46 540 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 ARMC8Q8IUR7 673 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 GRAMD2AQ8IUY3 354 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 LACC1Q8IV20 430 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 PEX5LQ8IYB4 626 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 SLC5A8Q8N695 610 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 POGLUT1Q8NBL1 392 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 CLEC1AQ8NC01 280 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms