RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 CASP9P55211 416 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 GFRA1P56159 465 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 CDSNQ15517 529 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 ACSF3Q4G176 576 aaPredicted RBP11.71□□□□□ -0.53
COL5A1-206ENST00000465877 FLYWCH1Q4VC44 716 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 RAET1LQ5VY80 246 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 TMEM211Q6ICI0 200 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 TNFAIP8L2Q6P589 184 aaPredicted RBP11.71□□□□□ -0.53
COL5A1-206ENST00000465877 XKRXQ6PP77 449 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 MSANTD1Q6ZTZ1 278 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 TRIML2Q8N7C3 387 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 CHDHQ8NE62 594 aaPredicted RBP11.71□□□□□ -0.53
COL5A1-206ENST00000465877 OR4C3Q8NH37 302 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 MIPOL1Q8TD10 442 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 DUSP19Q8WTR2 217 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 ABTB1Q969K4 478 aaPredicted RBP11.71□□□□□ -0.53
COL5A1-206ENST00000465877 SDCCAG3Q96C92 435 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 SFXN2Q96NB2 322 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 INPP5KQ9BT40 448 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 OR51I1Q9H343 314 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 PTGES2Q9H7Z7 377 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 COQ3Q9NZJ6 369 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 MED11Q9P086 117 aa11.71□□□□□ -0.53
COL5A1-206ENST00000465877 CCDC154A6NI56 674 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 NDUFB5O43674 189 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 GMFGO60234 142 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 CLDN14O95500 239 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 C1QCP02747 245 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 IL6P05231 212 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 COL8A1P27658 744 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 POLR2JP52435 117 aaKnown RBP11.7□□□□□ -0.54
COL5A1-206ENST00000465877 C17orf67Q0P5P2 114 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 FUT5Q11128 374 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 ART3Q13508 389 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 RCAN2Q14206 197 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 CD226Q15762 336 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 HSP90B2PQ58FF3 399 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 AAGABQ6PD74 315 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 ENPP6Q6UWR7 440 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 C16orf62Q7Z3J2 963 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 MISPQ8IVT2 679 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF527Q8NB42 609 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 STON2Q8WXE9 905 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 RND1Q92730 232 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 C1GALT1C1Q96EU7 318 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 WDYHV1Q96HA8 205 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 TTYH2Q9BSA4 534 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF350Q9GZX5 532 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 NPHS2Q9NP85 383 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 ALKBH4Q9NXW9 302 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 RNF6Q9Y252 685 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 RPH3AQ9Y2J0 694 aaPredicted RBP11.7□□□□□ -0.54
COL5A1-206ENST00000465877 MRPS18CQ9Y3D5 142 aaKnown RBP11.7□□□□□ -0.54
COL5A1-206ENST00000465877 KLF2Q9Y5W3 355 aaPredicted RBP11.7□□□□□ -0.54
COL5A1-206ENST00000465877 DCHS2Q6V1P9 2916 aa11.7□□□□□ -0.54
COL5A1-206ENST00000465877 INTS1Q8N201 2190 aaKnown RBP11.69□□□□□ -0.54
COL5A1-206ENST00000465877 MED12LQ86YW9 2145 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 FAM234BA2RU67 622 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 KDM4EB2RXH2 506 aaPredicted RBP11.69□□□□□ -0.54
COL5A1-206ENST00000465877 NPIPB9F8W1W9 429 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 H0Y3Z8 333 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 RFXANKO14593 260 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 TNFRSF21O75509 655 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 AGR2O95994 175 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 GSNP06396 782 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 HOXD4P09016 255 aaPredicted RBP11.69□□□□□ -0.54
COL5A1-206ENST00000465877 OR12D1P0DN82 309 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 GLI4P10075 376 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 HK1P19367 917 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 CHMP24386 653 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 CHRNB4P30926 498 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 RNF144AP50876 292 aaPredicted RBP11.69□□□□□ -0.54
COL5A1-206ENST00000465877 B3GALT5-AS1P59052 145 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 PMPCAQ10713 525 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF630Q2M218 657 aaPredicted RBP11.69□□□□□ -0.54
COL5A1-206ENST00000465877 ARHGAP11BQ3KRB8 267 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.69□□□□□ -0.54
COL5A1-206ENST00000465877 HEPHL1Q6MZM0 1159 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 RNF130Q86XS8 419 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 LACC1Q8IV20 430 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 ARFGAP2Q8N6H7 521 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF614Q8N883 585 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 PNPT1Q8TCS8 783 aaKnown RBP11.69□□□□□ -0.54
COL5A1-206ENST00000465877 CA5BP1Q8WTZ4 195 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 RAB8BQ92930 207 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 VPS33AQ96AX1 596 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 THOC1Q96FV9 657 aaKnown RBP11.69□□□□□ -0.54
COL5A1-206ENST00000465877 SH3YL1Q96HL8 342 aaPredicted RBP11.69□□□□□ -0.54
COL5A1-206ENST00000465877 SDF2Q99470 211 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 HOXD1Q9GZZ0 328 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 RMND5AQ9H871 391 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 HHATLQ9HCP6 504 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 MED4Q9NPJ6 270 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 SLC6A13Q9NSD5 602 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 EXD2Q9NVH0 621 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 VDAC3Q9Y277 283 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 MAST4O15021 2626 aa11.69□□□□□ -0.54
COL5A1-206ENST00000465877 A0A0G2JNJ9 132 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 OR2M5A3KFT3 312 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 FAM90A27PA6NNH2 459 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms