RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SMR3AQ99954 134 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 FOXC2Q99958 501 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 MRPL57Q9BQC6 102 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 TACO1Q9BSH4 297 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 OSBPL11Q9BXB4 747 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 EBPLQ9BY08 206 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 FUT8Q9BYC5 575 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 CALHM2Q9HA72 323 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 MKS1Q9NXB0 559 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 KLRF1Q9NZS2 232 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 FLRT3Q9NZU0 649 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 VPS29Q9UBQ0 182 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 MTRF1LQ9UGC7 380 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 MAGEL2Q9UJ55 1249 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 UTS2RQ9UKP6 389 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 SNX6Q9UNH7 406 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 EXO1Q9UQ84 846 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 DLGAP4Q9Y2H0 992 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 PCDHGB3Q9Y5G1 929 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 IKBKGQ9Y6K9 419 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF780BQ9Y6R6 833 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF469Q96JG9 3925 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 ZFHX3Q15911 3703 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 ABCA2Q9BZC7 2435 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 ITPR3Q14573 2671 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 CADP27708 2225 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 GNG14A0A1W2PPG7 69 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 A0A1W2PPM1 405 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 CCDC189A1A4V9 331 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 MBD3L4A6NDZ8 208 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 MBD3L3A6NE82 208 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 FRG2CA6NGY1 282 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 MBD3L5A6NJ08 208 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 CLCA1A8K7I4 914 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 H0Y3Z8 333 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 PLOD2O00469 737 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 UBFD1O14562 309 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 AKAP10O43572 662 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 TSPAN2O60636 221 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 GUCY1B2O75343 617 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 ERN1O75460 977 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 RCBTB2O95199 551 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 TGM6O95932 706 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 SCGB1D2O95969 90 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 ACTL6AO96019 429 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 OPN1LWP04000 364 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 SNRPAP09012 282 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 OSMP13725 252 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 CPN1P15169 458 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 NAGAP17050 411 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 TAC1P20366 129 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 IMPDH1P20839 514 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 DNASE1P24855 282 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 HMOX2P30519 316 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 OPRM1P35372 400 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 RFX3P48380 749 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 TMED10P49755 219 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 SERPINB9P50453 376 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 SUCLG1P53597 346 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 MANFP55145 182 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 CKAP4Q07065 602 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 FAM27E3Q08E93 113 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 C2orf80Q0P641 193 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 RCAN2Q14206 197 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 FBXL19-AS1Q494R0 122 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 FAM153CQ494X1 144 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF628Q5EBL2 1059 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 SPDYAQ5MJ70 313 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF678Q5SXM1 525 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 METTL2BQ6P1Q9 378 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 NPSR1Q6W5P4 371 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 LARP4Q71RC2 724 aaKnown RBP eCLIP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 IFNEQ86WN2 208 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 PLCZ1Q86YW0 608 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 SLC44A2Q8IWA5 706 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 UBQLNLQ8IYU4 475 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 C17orf47Q8NEP4 570 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 C1orf162Q8NEQ5 155 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 WFDC11Q8NEX6 87 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 OR7G2Q8NG99 324 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 MBD3L2Q8NHZ7 208 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 CDC26Q8NHZ8 85 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 ZPLD1Q8TCW7 415 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 C16orf78Q8WTQ4 265 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 DUSP19Q8WTR2 217 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 FAM222BQ8WU58 562 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 TMCO6Q96DC7 493 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 LRRC46Q96FV0 321 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 SFXN2Q96NB2 322 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 COL21A1Q96P44 957 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 TMEM237Q96Q45 408 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 SECISBP2Q96T21 854 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 FMO2Q99518 471 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 FAIM2Q9BWQ8 316 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 RBM24Q9BX46 236 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 C1QTNF3Q9BXJ4 246 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 ACPTQ9BZG2 426 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 SHCBP1LQ9BZQ2 653 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 RTN4RQ9BZR6 473 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 CXXC4Q9H2H0 198 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms