RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ZNF254O75437 659 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 SNX4O95219 450 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 LSM8O95777 96 aaKnown RBP4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 TGM6O95932 706 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 CRYAAP02489 173 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 APOC2P02655 101 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 CHRNA1P02708 482 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 GBAP04062 536 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 PGK2P07205 417 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 PAX1P15863 534 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 EPCAMP16422 314 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 C4BPBP20851 252 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 DNAJB1P25685 340 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 CHRNA7P36544 502 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 MNDAP41218 407 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 HNF4AP41235 474 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 ELK3P41970 407 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 ALDH3A2P51648 485 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 PLA2G16P53816 162 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 CDH11P55287 796 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 PKNOX1P55347 436 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 AP1S2P56377 157 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 OR2B6P58173 313 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 KRTAP10-11P60412 298 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 PSME3P61289 254 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 RPL10AP62906 217 aaKnown RBP4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 GSTO1P78417 241 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 RPL36AP83881 106 aaKnown RBP4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 GALK2Q01415 458 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 PRKCEQ02156 737 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 PRKCDQ05655 676 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 LGALS3BPQ08380 585 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 TAB1Q15750 504 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 PSMD5Q16401 504 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 UGCGQ16739 394 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZNF404Q494X3 552 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZNF672Q499Z4 452 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 BRMS1LQ5PSV4 323 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 LDLRAP1Q5SW96 308 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 CLVS2Q5SYC1 327 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 C12orf60Q5U649 245 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 LCN8Q6JVE9 175 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 EPGNQ6UW88 154 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 ENPP7Q6UWV6 458 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 NIPA1Q7RTP0 329 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 SPATA19Q7Z5L4 167 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 WDR49Q8IV35 697 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 CDKL3Q8IVW4 592 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 TIGD4Q8IY51 512 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 MCOLN2Q8IZK6 566 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZNF444Q8N0Y2 327 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 CBR4Q8N4T8 237 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 FNDC5Q8NAU1 212 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 FBXL13Q8NEE6 735 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 BPIFB6Q8NFQ5 453 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 OR5H6Q8NGV6 325 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 BRSK1Q8TDC3 778 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 MCOLN3Q8TDD5 553 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 ATP6V1E2Q96A05 226 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 FAF2Q96CS3 445 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZHX1-C8orf76Q96EF9 292 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 BTN2A3PQ96KV6 586 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 ACCSQ96QU6 501 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZSCAN5AQ9BUG6 496 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 CALN1Q9BXU9 219 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 IL22Q9GZX6 179 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 DSN1Q9H410 356 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 SYNDIG1Q9H7V2 258 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 NIPAL2Q9H841 368 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 TIGARQ9NQ88 270 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 AGPAT4Q9NRZ5 378 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 TBC1D13Q9NVG8 400 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 B3GNT2Q9NY97 397 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 USE1Q9NZ43 259 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 PTTG3PQ9NZH4 202 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 GLS2Q9UI32 602 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 PHF11Q9UIL8 331 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 KCNG2Q9UJ96 466 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 ACAD8Q9UKU7 415 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 TMCC3Q9ULS5 477 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 AURKCQ9UQB9 309 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 PDE10AQ9Y233 779 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 AP3M1Q9Y2T2 418 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 TEX264Q9Y6I9 313 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 CSNK1G3Q9Y6M4 447 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 OTOFQ9HC10 1997 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 LOC100653049A0A140TA62 436 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 CLRN2A0PK11 232 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 CCDC182A6NF36 153 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 TUBAL3A6NHL2 446 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 FAM159BA6NKW6 160 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 ATP6V1G2-DDX39BF2Z307 99 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 H0YCG3 227 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 PLOD2O00469 737 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 BTN3A3O00478 584 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 EI24O14681 340 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 FGF17O60258 216 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 NMT2O60551 498 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms