RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, human

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-208	ENST00000431611	SLC9A6	Q92581	669 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	HOXB13	Q92826	284 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	LRTM1	Q9HBL6	345 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	TNFRSF12A	Q9NP84	129 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	FANCF	Q9NPI8	374 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	MCTS1	Q9ULC4	181 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	TRIM64	A6NGJ6	449 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	TRIM64B	A6NI03	449 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SLC28A1	O00337	649 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	RGS14	O43566	566 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CXCL13	O43927	109 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SS18L1	O75177	396 aa	Predicted RBP	13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SYNGR4	O95473	234 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	THBD	P07204	575 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	NGFR	P08138	427 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	FAM153B	P0C7A2	387 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	IL11	P20809	199 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PRPH2	P23942	346 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CCT5	P48643	541 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	MANF	P55145	182 aa	Known RBP	13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CCDC153	Q494R4	210 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	FAM153C	Q494X1	144 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CLEC6A	Q6EIG7	209 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	STAC2	Q6ZMT1	411 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SZRD1	Q7Z422	152 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CCDC63	Q8NA47	563 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	GATS	Q8NAP1	163 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	NUP43	Q8NFH3	380 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ZBTB8A	Q96BR9	441 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PPCDC	Q96CD2	204 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ZNF764	Q96H86	408 aa	Predicted RBP	13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ADGRG7	Q96K78	797 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	GSX2	Q9BZM3	304 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	REEP4	Q9H6H4	257 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	C1orf109	Q9NX04	203 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SH3BP4	Q9P0V3	963 aa		13.56	□□□□□ -0.24
CSNK1E-208	ENST00000431611		A0A1W2PRB8	838 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	C7orf72	A4D263	438 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	NPIPB8	E9PQR5	432 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ADAMDEC1	O15204	470 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	KLF4	O43474	513 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	AKAP10	O43572	662 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PLIN3	O60664	434 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	OPN1LW	P04000	364 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ACP2	P11117	423 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CPA3	P15088	417 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	HPGD	P15428	266 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PTH2R	P49190	550 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ZNF41	P51814	821 aa	Predicted RBP	13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	RAC1	P63000	192 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SLC18A2	Q05940	514 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CTU2	Q2VPK5	515 aa	Known RBP	13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ZNF385B	Q569K4	471 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CPTP	Q5TA50	214 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	FIGNL1	Q6PIW4	674 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	BEND4	Q6ZU67	534 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SH2D5	Q6ZV89	423 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SLC16A11	Q8NCK7	471 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	OR6Y1	Q8NGX8	325 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	OR2V1	Q8NHB1	315 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	FBXO30	Q8TB52	745 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	FAM110B	Q8TC76	370 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ACTRT2	Q8TDY3	377 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	RNF145	Q96MT1	663 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	MS4A4E	Q96PG1	132 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	TSSK3	Q96PN8	268 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	NPAS1	Q99742	590 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CCT7	Q99832	543 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	TXLNGY	Q9BZA5	131 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	GLRX2	Q9NS18	164 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	MED17	Q9NVC6	651 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	OXSM	Q9NWU1	459 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	NTM	Q9P121	344 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PTGDR2	Q9Y5Y4	395 aa		13.55	□□□□□ -0.24
CSNK1E-208	ENST00000431611	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SCD	O00767	359 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	TNFSF11	O14788	317 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	TBX19	O60806	448 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	KCNK2	O95069	426 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ALOX5	P09917	674 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SDC1	P18827	310 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ME2	P23368	584 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PSMA4	P25789	261 aa	Known RBP	13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PCSK6	P29122	969 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CRHR1	P34998	444 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	NR1H2	P55055	460 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	DUSP5	Q16690	384 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PLPPR5	Q32ZL2	321 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PDSS1	Q5T2R2	415 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	HBM	Q6B0K9	141 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	MFSD12	Q6NUT3	480 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611		Q6ZSR9	355 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ESPNL	Q6ZVH7	1005 aa		13.54	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ZAR1	Q86SH2	424 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms