RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SNAI1O95863 264 aaPredicted RBP11.37□□□□□ -0.59
UBR4-205ENST00000417040 OPN1LWP04000 364 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 ITGB8P26012 769 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 TUBB3Q13509 450 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 C2orf42Q9NWW7 574 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 RCE1Q9Y256 329 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 C9J4A7 227 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 I6L893 689 aaPredicted RBP11.37□□□□□ -0.59
UBR4-205ENST00000417040 FADS1O60427 444 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 PRAMEF2O60811 474 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 GASTP01350 101 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 CDK2P24941 298 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 GABRB3P28472 473 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 RAET1LQ5VY80 246 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 PDZD3Q86UT5 571 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 ZNF695Q8IW36 515 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 MS4A15Q8N5U1 240 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 ZNF419Q96HQ0 510 aaPredicted RBP11.37□□□□□ -0.59
UBR4-205ENST00000417040 ACTRT3Q9BYD9 372 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 OR51B6Q9H340 312 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 PTGES2Q9H7Z7 377 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 TAS2R8Q9NYW2 309 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 VSX1Q9NZR4 365 aaPredicted RBP11.37□□□□□ -0.59
UBR4-205ENST00000417040 FBXO24O75426 580 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 MED6O75586 246 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 DIRAS3O95661 229 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 ZNF84P51523 738 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 CLDN12P56749 244 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 TAP2Q03519 686 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 ENTHD1Q8IYW4 607 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 CSNK1A1LQ8N752 337 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 ST8SIA2Q92186 375 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 SERTAD3Q9UJW9 196 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 ZNF736B4DX44 427 aaPredicted RBP11.36□□□□□ -0.59
UBR4-205ENST00000417040 FGF18O76093 207 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 FUCA1P04066 466 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 PCSK6P29122 969 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 ARRB1P49407 418 aaPredicted RBP11.36□□□□□ -0.59
UBR4-205ENST00000417040 SRYQ05066 204 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 NOGQ13253 232 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 LRIF1Q5T3J3 769 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 CPZQ66K79 652 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 SUMF2Q8NBJ7 301 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 DNAAF1Q8NEP3 725 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 RTP4Q96DX8 246 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 PCDHA9Q9Y5H5 950 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 ARFGEF2Q9Y6D5 1785 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 IFT172Q9UG01 1749 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 A0A0B4J2A0 478 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 TRAPPC13A5PLN9 417 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 FABP7O15540 132 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 SEC14L5O43304 696 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 CACNG3O60359 315 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 ICMTO60725 284 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 EIF4HQ15056 248 aaKnown RBP11.36□□□□□ -0.59
UBR4-205ENST00000417040 MAVSQ7Z434 540 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 GKN2Q86XP6 184 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 RHOXF1Q8NHV9 184 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 THRSPQ92748 146 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 EGLN2Q96KS0 407 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 PINK1Q9BXM7 581 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 SPHK2Q9NRA0 654 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 SHPKQ9UHJ6 478 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 OSGIN1Q9UJX0 560 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 NAALAD2Q9Y3Q0 740 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 TRBV4-1A0A0J9YWV2 114 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 CLEC3AO75596 197 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 KLF8O95600 359 aaPredicted RBP11.36□□□□□ -0.59
UBR4-205ENST00000417040 GPR155Q7Z3F1 870 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 OR8J2Q8NGG1 315 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 ST7LQ8TDW4 575 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 PLEKHA3Q9HB20 300 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 KCPQ6ZWJ8 1503 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 FAM227AF5H4B4 570 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 BMP1P13497 986 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 SNRPBP14678 240 aaKnown RBP11.36□□□□□ -0.59
UBR4-205ENST00000417040 ARSBP15848 533 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 FBLP22087 321 aaKnown RBP11.36□□□□□ -0.59
UBR4-205ENST00000417040 ZNF280AP59817 542 aaPredicted RBP11.36□□□□□ -0.59
UBR4-205ENST00000417040 IL13RA1P78552 427 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 SLC9A3R2Q15599 337 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 MYLIPQ8WY64 445 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 ZBTB8AQ96BR9 441 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 PRODH2Q9UF12 536 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 ZNF175Q9Y473 711 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 NALCNQ8IZF0 1738 aa11.36□□□□□ -0.59
UBR4-205ENST00000417040 TCRBV21S2A2A0A5A6 115 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 ARHGAP33O14559 1287 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 LDB3O75112 727 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 HOXB5P09067 269 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 GAAP10253 952 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 PNMTP11086 282 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 TPT1P13693 172 aaKnown RBP11.35□□□□□ -0.59
UBR4-205ENST00000417040 RORAP35398 523 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 SPINT3P49223 89 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 ZNF461Q8TAF7 563 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 NEIL2Q969S2 332 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 ELP4Q96EB1 424 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 SLC38A1Q9H2H9 487 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 GORASP2Q9H8Y8 452 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms