RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 PPA2Q9H2U2 334 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 C3orf14Q9HBI5 128 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 NPAP1Q9NZP6 1156 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 DUX4Q9UBX2 424 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 U3KQ87 197 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 RIIAD1A6NNX1 92 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 BLOC1S5-TXNDC5H3BN57 136 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 FLRT2O43155 660 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 FZD7O75084 574 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 POP7O75817 140 aaKnown RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 HPGDP15428 266 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 GPX2P18283 190 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 NT5EP21589 574 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 RPS5P46782 204 aaKnown RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 CLCNKAP51800 687 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 MC2RQ01718 297 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TAGLNQ01995 201 aaKnown RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 TMEM115Q12893 351 aaPredicted RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 FXNQ16595 210 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 FNDC3BQ53EP0 1204 aaKnown RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 SPIN4Q56A73 249 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TMEM69Q5SWH9 247 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 FAM109BQ6ICB4 259 aaPredicted RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 FAM198BQ6UWH4 519 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 RSPO2Q6UXX9 243 aaPredicted RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 SLITRK4Q8IW52 837 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 PROKR2Q8NFJ6 384 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 OR5AR1Q8NGP9 310 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 CASD1Q96PB1 797 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 ELF4Q99607 663 aaPredicted RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 PIGUQ9H490 435 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 CCDC86Q9H6F5 360 aaKnown RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 FANCFQ9NPI8 374 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 CD93Q9NPY3 652 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TRBV2A0A0J9YWF9 115 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ELOA3DA6NLF2 546 aaPredicted RBP8.27□□□□□ -1.09
RTN4-206ENST00000394611 SLC33A1O00400 549 aaPredicted RBP8.27□□□□□ -1.09
RTN4-206ENST00000394611 RGS13O14921 159 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 LEFTY1O75610 366 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 B3GALNT1O75752 331 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ANKRD34CP0C6C1 535 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 PCGF2P35227 344 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 SLC1A3P43003 542 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 AP1S1P61966 158 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 GPR17Q13304 367 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 CLINT1Q14677 625 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ELOA3BQ3SY89 546 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 PRAMEF17Q5VTA0 474 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 NHLRC1Q6VVB1 395 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 CREB3L2Q70SY1 520 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 NLRC3Q7RTR2 1065 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 NPAS4Q8IUM7 802 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 FBXL6Q8N531 539 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 MS4A15Q8N5U1 240 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ACBD7Q8N6N7 88 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 SDR9C7Q8NEX9 313 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ELOA3Q8NG57 546 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ECHDC3Q96DC8 303 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 CLSTN3Q9BQT9 956 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 WFDC6Q9BQY6 131 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 CSNK1G1Q9HCP0 422 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 TCF7L1Q9HCS4 588 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 TDRD15B5MCY1 1934 aaKnown RBP8.27□□□□□ -1.09
RTN4-206ENST00000394611 SGCEO43556 437 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 LALBAP00709 142 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ADAP00813 363 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ALPPP05187 535 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 HMGN2P05204 90 aaKnown RBP8.27□□□□□ -1.09
RTN4-206ENST00000394611 GTF2F2P13984 249 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 GABRB1P18505 474 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 CD22P20273 847 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 CRYBB2P43320 205 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 PSMD4P55036 377 aaKnown RBP8.27□□□□□ -1.09
RTN4-206ENST00000394611 POLR2LP62875 67 aaKnown RBP8.27□□□□□ -1.09
RTN4-206ENST00000394611 MLLT11Q13015 90 aaPredicted RBP8.27□□□□□ -1.09
RTN4-206ENST00000394611 HTR4Q13639 388 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 MANEALQ5VSG8 457 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 TPRG1Q6ZUI0 275 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 IKBIPQ70UQ0 350 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 PAQR7Q86WK9 346 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 CMIPQ8IY22 773 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 METTL2AQ96IZ6 378 aaKnown RBP8.27□□□□□ -1.09
RTN4-206ENST00000394611 TMEM43Q9BTV4 400 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 SPNS1Q9H2V7 528 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ELL3Q9HB65 397 aaPredicted RBP8.27□□□□□ -1.09
RTN4-206ENST00000394611 GSKIPQ9P0R6 139 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 TNFSF12O43508 249 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 RAF1P04049 648 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ACSM4P0C7M7 580 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 TRIM23P36406 574 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 EIF1AXP47813 144 aaKnown RBP8.27□□□□□ -1.09
RTN4-206ENST00000394611 SLC6A11P48066 632 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 PER3P56645 1201 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 DSC1Q08554 894 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ASAH1Q13510 395 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ACSM3Q53FZ2 586 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 XKR4Q5GH76 650 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 ZER1Q7Z7L7 766 aa8.27□□□□□ -1.09
RTN4-206ENST00000394611 DUSP19Q8WTR2 217 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms