RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 CNOT1A5YKK6 2376 aaKnown RBP20.97■□□□□ 0.95
CDX1-201ENST00000231656 H3BMQ9 156 aa20.97■□□□□ 0.95
CDX1-201ENST00000231656 RGS10O43665 173 aa20.97■□□□□ 0.95
CDX1-201ENST00000231656 MT-ND2P03891 347 aa20.97■□□□□ 0.95
CDX1-201ENST00000231656 MAP4K2Q12851 820 aa20.97■□□□□ 0.95
CDX1-201ENST00000231656 CCNJQ5T5M9 372 aa20.97■□□□□ 0.95
CDX1-201ENST00000231656 TMEM236Q5W0B7 351 aa20.97■□□□□ 0.95
CDX1-201ENST00000231656 ZNF385CQ66K41 422 aaPredicted RBP20.97■□□□□ 0.95
CDX1-201ENST00000231656 LINC00471Q8N535 108 aa20.97■□□□□ 0.95
CDX1-201ENST00000231656 PMEPA1Q969W9 287 aa20.97■□□□□ 0.95
CDX1-201ENST00000231656 LIN37Q96GY3 246 aaPredicted RBP20.97■□□□□ 0.95
CDX1-201ENST00000231656 COG8Q96MW5 612 aa20.97■□□□□ 0.95
CDX1-201ENST00000231656 PRR14Q9BWN1 585 aa20.97■□□□□ 0.95
CDX1-201ENST00000231656 SAP130Q9H0E3 1048 aa20.97■□□□□ 0.95
CDX1-201ENST00000231656 TRIM64BA6NI03 449 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 INMTO95050 263 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 CDK4P11802 303 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 ZNF28P17035 718 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 MAOAP21397 527 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 RPS4Y1P22090 263 aaKnown RBP20.96■□□□□ 0.95
CDX1-201ENST00000231656 MASP1P48740 699 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 GP2P55259 537 aaKnown RBP20.96■□□□□ 0.95
CDX1-201ENST00000231656 IGLV3-21P80748 117 aaPredicted RBP20.96■□□□□ 0.95
CDX1-201ENST00000231656 STX4Q12846 297 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 VWA2Q5GFL6 755 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 DCST2Q5T1A1 773 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 HES3Q5TGS1 186 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 ZNF836Q6ZNA1 936 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 RAB11FIP2Q7L804 512 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 P3H2Q8IVL5 708 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 PEX5LQ8IYB4 626 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 OR4K5Q8NGD3 323 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 PIK3R3Q92569 461 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 DIO2Q92813 273 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 MKKSQ9NPJ1 570 aaPredicted RBP20.96■□□□□ 0.95
CDX1-201ENST00000231656 CTPS2Q9NRF8 586 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 FKBP14Q9NWM8 211 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 KLHL28Q9NXS3 571 aa20.96■□□□□ 0.95
CDX1-201ENST00000231656 CENPVL1A0A0U1RR11 272 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 AGAP5A6NIR3 686 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 OR10H2O60403 315 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 CPNE3O75131 537 aaKnown RBP20.95■□□□□ 0.94
CDX1-201ENST00000231656 TP53P04637 393 aaPredicted RBP20.95■□□□□ 0.94
CDX1-201ENST00000231656 THBS1P07996 1170 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 S1PR1P21453 382 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 RORAP35398 523 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 MAP2K4P45985 399 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 TAS2R41P59536 307 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 EEF1A1P68104 462 aaKnown RBP20.95■□□□□ 0.94
CDX1-201ENST00000231656 DCDP81605 110 aaKnown RBP20.95■□□□□ 0.94
CDX1-201ENST00000231656 ROR2Q01974 943 aaKnown RBP20.95■□□□□ 0.94
CDX1-201ENST00000231656 NKAIN1Q4KMZ8 207 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 CD300LDQ6UXZ3 194 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 PRSS48Q7RTY5 328 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 ZNF619Q8N2I2 560 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 VWA5B2Q8N398 1253 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 COX18Q8N8Q8 333 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 DEPDC7Q96QD5 511 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 ALOXE3Q9BYJ1 711 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 IMPAD1Q9NX62 359 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 PSORS1C1Q9UIG5 152 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 PTPRZ1P23471 2315 aaPredicted RBP20.95■□□□□ 0.94
CDX1-201ENST00000231656 ZNF99A8MXY4 864 aaPredicted RBP20.95■□□□□ 0.94
CDX1-201ENST00000231656 M0R129 80 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 DKK1O94907 266 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 ATE1O95260 518 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 ETV5P41161 510 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 TMBIM6P55061 237 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 CDC42P60953 191 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 NHLH1Q02575 133 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 TARDBPQ13148 414 aaKnown RBP eCLIP20.95■□□□□ 0.94
CDX1-201ENST00000231656 AHSA2Q719I0 299 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 ZER1Q7Z7L7 766 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 OR52R1Q8NGF1 315 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 POLR2J3Q9H1A7 115 aaKnown RBP20.95■□□□□ 0.94
CDX1-201ENST00000231656 CTSFQ9UBX1 484 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 ZNF232Q9UNY5 417 aa20.95■□□□□ 0.94
CDX1-201ENST00000231656 SPAARA0A1B0GVQ0 90 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 COQ9O75208 318 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 STX11O75558 287 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 CYP7B1O75881 506 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 NKX2-2O95096 273 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 SLC34A2O95436 690 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 ONECUT2O95948 504 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 AK1P00568 194 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 IGFBP1P08833 259 aaPredicted RBP20.94■□□□□ 0.94
CDX1-201ENST00000231656 FTH1P19P0C7X4 201 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 MMP11P24347 488 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 ACVR2AP27037 513 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 POU1F1P28069 291 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 TRHRP34981 398 aaPredicted RBP20.94■□□□□ 0.94
CDX1-201ENST00000231656 RGS8P57771 180 aaPredicted RBP20.94■□□□□ 0.94
CDX1-201ENST00000231656 LSM11P83369 360 aaKnown RBP eCLIP20.94■□□□□ 0.94
CDX1-201ENST00000231656 ALDH6A1Q02252 535 aaKnown RBP20.94■□□□□ 0.94
CDX1-201ENST00000231656 LARS2Q15031 903 aaKnown RBP20.94■□□□□ 0.94
CDX1-201ENST00000231656 SLX4IPQ5VYV7 408 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 C1orf94Q6P1W5 598 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 GPR151Q8TDV0 419 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 NECTIN3Q9NQS3 549 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 FBXO34Q9NWN3 711 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms