RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR56, Length 88 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR56	snR56	AFR1	P33304	620 aa		5.05	□□□□□ -1.6
snR56	snR56	PPZ2	P33329	710 aa		5.05	□□□□□ -1.6
snR56	snR56	TDP1	P38319	544 aa		5.05	□□□□□ -1.6
snR56	snR56	CAF20	P12962	161 aa	Known RBP	5.04	□□□□□ -1.6
snR56	snR56	GFA1	P14742	717 aa	Known RBP	5.04	□□□□□ -1.6
snR56	snR56	MDM10	P18409	493 aa		5.04	□□□□□ -1.6
snR56	snR56	YIL108W	P40483	696 aa	Known RBP	5.04	□□□□□ -1.6
snR56	snR56	TAH11	P47112	604 aa		5.04	□□□□□ -1.6
snR56	snR56	IMO32	P53219	342 aa		5.04	□□□□□ -1.6
snR56	snR56	COQ11	Q05892	277 aa		5.04	□□□□□ -1.6
snR56	snR56	SWM1	Q12379	170 aa		5.04	□□□□□ -1.6
snR56	snR56	RIX1	P38883	763 aa	Predicted RBP	5.03	□□□□□ -1.6
snR56	snR56	VPS73	P53142	486 aa	Known RBP	5.03	□□□□□ -1.6
snR56	snR56	AFT2	Q08957	416 aa		5.03	□□□□□ -1.6
snR56	snR56	TUB1	P09733	447 aa	Known RBP	5.02	□□□□□ -1.61
snR56	snR56	FLO10	P36170	1169 aa		5.02	□□□□□ -1.61
snR56	snR56	FKH2	P41813	862 aa		5.02	□□□□□ -1.61
snR56	snR56	KRI1	P42846	591 aa	Known RBP	5.02	□□□□□ -1.61
snR56	snR56	MUP1	P50276	574 aa		5.02	□□□□□ -1.61
snR56	snR56	MRPS35	P53292	345 aa		5.02	□□□□□ -1.61
snR56	snR56	VPS30	Q02948	557 aa		5.02	□□□□□ -1.61
snR56	snR56	GDE1	Q02979	1223 aa		5.02	□□□□□ -1.61
snR56	snR56	HOF1	Q05080	669 aa		5.02	□□□□□ -1.61
snR56	snR56	PRP4	P20053	465 aa	Known RBP	5.01	□□□□□ -1.61
snR56	snR56	PPH3	P32345	308 aa		5.01	□□□□□ -1.61
snR56	snR56	ASF1	P32447	279 aa		5.01	□□□□□ -1.61
snR56	snR56	RPP1	P38786	293 aa		5.01	□□□□□ -1.61
snR56	snR56	YDR306C	Q06640	478 aa		5.01	□□□□□ -1.61
snR56	snR56	VBA5	P36172	582 aa		5	□□□□□ -1.61
snR56	snR56	YBR053C	P38235	358 aa		5	□□□□□ -1.61
snR56	snR56	VPS16	Q03308	798 aa		5	□□□□□ -1.61
snR56	snR56	YNL162W-A	Q3E7A8	72 aa		5	□□□□□ -1.61
snR56	snR56	ADE8	P04161	214 aa		4.99	□□□□□ -1.61
snR56	snR56	TYE7	P33122	291 aa	Predicted RBP	4.99	□□□□□ -1.61
snR56	snR56	YKR011C	Q02209	353 aa		4.99	□□□□□ -1.61
snR56	snR56	SHE9	Q04172	456 aa		4.99	□□□□□ -1.61
snR56	snR56	FAL1	Q12099	399 aa	Known RBP	4.99	□□□□□ -1.61
snR56	snR56	HCA4	P20448	770 aa	Known RBP	4.98	□□□□□ -1.61
snR56	snR56	PCL5	P38794	229 aa		4.98	□□□□□ -1.61
snR56	snR56	YJL163C	P46996	555 aa		4.98	□□□□□ -1.61
snR56	snR56	HDA1	P53973	706 aa		4.98	□□□□□ -1.61
snR56	snR56	ICT1	Q12385	394 aa		4.98	□□□□□ -1.61
snR56	snR56	ILV6	P25605	309 aa	Known RBP	4.97	□□□□□ -1.61
snR56	snR56	YHR078W	P38799	552 aa		4.97	□□□□□ -1.61
snR56	snR56	SIT1	P39980	628 aa		4.97	□□□□□ -1.61
snR56	snR56	MET6	P05694	767 aa	Known RBP	4.96	□□□□□ -1.62
snR56	snR56	CDC43	P18898	376 aa		4.96	□□□□□ -1.62
snR56	snR56	AAR2	P32357	355 aa	Predicted RBP	4.96	□□□□□ -1.62
snR56	snR56	YRO2	P38079	344 aa		4.96	□□□□□ -1.62
snR56	snR56	BUL2	Q03758	920 aa	Known RBP	4.96	□□□□□ -1.62
snR56	snR56	ARO10	Q06408	635 aa		4.96	□□□□□ -1.62
snR56	snR56	RFA1	P22336	621 aa	Known RBP	4.95	□□□□□ -1.62
snR56	snR56	ERT1	P38140	529 aa		4.95	□□□□□ -1.62
snR56	snR56	CEP3	P40969	608 aa		4.95	□□□□□ -1.62
snR56	snR56	AMA1	P50082	593 aa		4.95	□□□□□ -1.62
snR56	snR56	RIA1	P53893	1110 aa		4.95	□□□□□ -1.62
snR56	snR56	ASI2	P53895	289 aa		4.95	□□□□□ -1.62
snR56	snR56	CRR1	Q05790	422 aa		4.95	□□□□□ -1.62
snR56	snR56	YAP7	Q08182	245 aa		4.95	□□□□□ -1.62
snR56	snR56	KIN3	P22209	435 aa		4.94	□□□□□ -1.62
snR56	snR56	YIL166C	P40445	542 aa		4.94	□□□□□ -1.62
snR56	snR56	VHR1	P40522	640 aa		4.94	□□□□□ -1.62
snR56	snR56	NOP8	Q08287	484 aa	Predicted RBP	4.94	□□□□□ -1.62
snR56	snR56	URA1	P28272	314 aa	Predicted RBP	4.93	□□□□□ -1.62
snR56	snR56	CCM1	P48237	864 aa	Predicted RBP	4.93	□□□□□ -1.62
snR56	snR56	YML020W	Q03722	664 aa		4.93	□□□□□ -1.62
snR56	snR56	THI7	Q05998	598 aa		4.93	□□□□□ -1.62
snR56	snR56	ADY2	P25613	283 aa		4.92	□□□□□ -1.62
snR56	snR56	TMT1	P32643	299 aa		4.92	□□□□□ -1.62
snR56	snR56	YKL069W	P36088	180 aa		4.92	□□□□□ -1.62
snR56	snR56	OPI10	Q08202	246 aa		4.92	□□□□□ -1.62
snR56	snR56	IRC13	Q08630	104 aa		4.92	□□□□□ -1.62
snR56	snR56	GGA2	P38817	585 aa	Known RBP	4.91	□□□□□ -1.62
snR56	snR56	TOK1	P40310	691 aa		4.9	□□□□□ -1.63
snR56	snR56	YIR042C	P40586	236 aa		4.9	□□□□□ -1.63
snR56	snR56	SGO1	Q08490	590 aa		4.9	□□□□□ -1.63
snR56	snR56	CLN2	P20438	545 aa		4.89	□□□□□ -1.63
snR56	snR56	PBY1	P38254	753 aa		4.89	□□□□□ -1.63
snR56	snR56	PKH1	Q03407	766 aa		4.89	□□□□□ -1.63
snR56	snR56	LCD1	Q04377	747 aa		4.89	□□□□□ -1.63
snR56	snR56	MRP8	P35719	219 aa		4.88	□□□□□ -1.63
snR56	snR56	HBS1	P32769	611 aa	Known RBP	4.87	□□□□□ -1.63
snR56	snR56	REC104	P33323	182 aa		4.87	□□□□□ -1.63
snR56	snR56	TPO2	P53283	614 aa		4.87	□□□□□ -1.63
snR56	snR56	NRG1	Q03125	231 aa		4.87	□□□□□ -1.63
snR56	snR56	MUS81	Q04149	632 aa	Predicted RBP	4.87	□□□□□ -1.63
snR56	snR56	PIN2	Q12057	282 aa		4.87	□□□□□ -1.63
snR56	snR56	RPS9A	O13516	197 aa	Known RBP	4.86	□□□□□ -1.63
snR56	snR56	MPH2	P0CD99	609 aa		4.86	□□□□□ -1.63
snR56	snR56	LAT1	P12695	482 aa	Known RBP	4.86	□□□□□ -1.63
snR56	snR56	CBR1	P38626	284 aa	Known RBP	4.86	□□□□□ -1.63
snR56	snR56	PUS2	P53167	370 aa		4.86	□□□□□ -1.63
snR56	snR56	DUS1	P53759	423 aa	Known RBP	4.86	□□□□□ -1.63
snR56	snR56	CWC24	P53769	259 aa		4.86	□□□□□ -1.63
snR56	snR56	SSL2	Q00578	843 aa		4.86	□□□□□ -1.63
snR56	snR56	YLR415C	O13578	112 aa		4.85	□□□□□ -1.63
snR56	snR56	PRI2	P20457	528 aa		4.85	□□□□□ -1.63
snR56	snR56	DMC1	P25453	334 aa		4.85	□□□□□ -1.63
snR56	snR56	FMP52	P40008	231 aa		4.85	□□□□□ -1.63
snR56	snR56	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 44 ms