RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	ICT1	Q12385	394 aa		4.38	□□□□□ -1.71
RUD3	YOR216C	YNL162W-A	Q3E7A8	72 aa		4.38	□□□□□ -1.71
RUD3	YOR216C	MET3	P08536	511 aa		4.37	□□□□□ -1.71
RUD3	YOR216C	AGP1	P25376	633 aa		4.37	□□□□□ -1.71
RUD3	YOR216C	AFR1	P33304	620 aa		4.37	□□□□□ -1.71
RUD3	YOR216C	DLT1	Q04216	342 aa		4.37	□□□□□ -1.71
RUD3	YOR216C	TRM11	Q12463	433 aa		4.37	□□□□□ -1.71
RUD3	YOR216C	GFA1	P14742	717 aa	Known RBP	4.37	□□□□□ -1.71
RUD3	YOR216C	GDE1	Q02979	1223 aa		4.37	□□□□□ -1.71
RUD3	YOR216C	TUB1	P09733	447 aa	Known RBP	4.36	□□□□□ -1.71
RUD3	YOR216C	CTF8	P38877	133 aa		4.36	□□□□□ -1.71
RUD3	YOR216C	TDP1	P38319	544 aa		4.35	□□□□□ -1.71
RUD3	YOR216C	RIX1	P38883	763 aa	Predicted RBP	4.35	□□□□□ -1.71
RUD3	YOR216C	YIL108W	P40483	696 aa	Known RBP	4.35	□□□□□ -1.71
RUD3	YOR216C	TAH11	P47112	604 aa		4.35	□□□□□ -1.71
RUD3	YOR216C	YDR306C	Q06640	478 aa		4.35	□□□□□ -1.71
RUD3	YOR216C	CAF20	P12962	161 aa	Known RBP	4.34	□□□□□ -1.71
RUD3	YOR216C	MDM10	P18409	493 aa		4.34	□□□□□ -1.71
RUD3	YOR216C	ASF1	P32447	279 aa		4.34	□□□□□ -1.71
RUD3	YOR216C	PPZ2	P33329	710 aa		4.34	□□□□□ -1.71
RUD3	YOR216C	VBA5	P36172	582 aa		4.34	□□□□□ -1.71
RUD3	YOR216C	MUP1	P50276	574 aa		4.34	□□□□□ -1.71
RUD3	YOR216C	MRPS35	P53292	345 aa		4.34	□□□□□ -1.71
RUD3	YOR216C	VPS30	Q02948	557 aa		4.34	□□□□□ -1.71
RUD3	YOR216C	FAL1	Q12099	399 aa	Known RBP	4.34	□□□□□ -1.71
RUD3	YOR216C	SWM1	Q12379	170 aa		4.34	□□□□□ -1.71
RUD3	YOR216C	PPH3	P32345	308 aa		4.33	□□□□□ -1.72
RUD3	YOR216C	TMT1	P32643	299 aa		4.33	□□□□□ -1.72
RUD3	YOR216C	FLO10	P36170	1169 aa		4.33	□□□□□ -1.72
RUD3	YOR216C	FKH2	P41813	862 aa		4.33	□□□□□ -1.72
RUD3	YOR216C	KRI1	P42846	591 aa	Known RBP	4.33	□□□□□ -1.72
RUD3	YOR216C	VPS73	P53142	486 aa	Known RBP	4.33	□□□□□ -1.72
RUD3	YOR216C	PRP4	P20053	465 aa	Known RBP	4.32	□□□□□ -1.72
RUD3	YOR216C	RPP1	P38786	293 aa		4.32	□□□□□ -1.72
RUD3	YOR216C	YAP7	Q08182	245 aa		4.32	□□□□□ -1.72
RUD3	YOR216C	HCA4	P20448	770 aa	Known RBP	4.31	□□□□□ -1.72
RUD3	YOR216C	HDA1	P53973	706 aa		4.31	□□□□□ -1.72
RUD3	YOR216C	VPS16	Q03308	798 aa		4.31	□□□□□ -1.72
RUD3	YOR216C	YML020W	Q03722	664 aa		4.31	□□□□□ -1.72
RUD3	YOR216C	ARO10	Q06408	635 aa		4.31	□□□□□ -1.72
RUD3	YOR216C	ADE8	P04161	214 aa		4.3	□□□□□ -1.72
RUD3	YOR216C	YRO2	P38079	344 aa		4.3	□□□□□ -1.72
RUD3	YOR216C	ERT1	P38140	529 aa		4.3	□□□□□ -1.72
RUD3	YOR216C	YBR053C	P38235	358 aa		4.3	□□□□□ -1.72
RUD3	YOR216C	PCL5	P38794	229 aa		4.3	□□□□□ -1.72
RUD3	YOR216C	YKR011C	Q02209	353 aa		4.3	□□□□□ -1.72
RUD3	YOR216C	RFA1	P22336	621 aa	Known RBP	4.3	□□□□□ -1.72
RUD3	YOR216C	AAR2	P32357	355 aa	Predicted RBP	4.3	□□□□□ -1.72
RUD3	YOR216C	TYE7	P33122	291 aa	Predicted RBP	4.3	□□□□□ -1.72
RUD3	YOR216C	SHE9	Q04172	456 aa		4.3	□□□□□ -1.72
RUD3	YOR216C	NOP8	Q08287	484 aa	Predicted RBP	4.3	□□□□□ -1.72
RUD3	YOR216C	YKL069W	P36088	180 aa		4.29	□□□□□ -1.72
RUD3	YOR216C	YHR078W	P38799	552 aa		4.29	□□□□□ -1.72
RUD3	YOR216C	YIL166C	P40445	542 aa		4.29	□□□□□ -1.72
RUD3	YOR216C	CEP3	P40969	608 aa		4.29	□□□□□ -1.72
RUD3	YOR216C	YJL163C	P46996	555 aa		4.29	□□□□□ -1.72
RUD3	YOR216C	SIT1	P39980	628 aa		4.28	□□□□□ -1.72
RUD3	YOR216C	BUL2	Q03758	920 aa	Known RBP	4.28	□□□□□ -1.72
RUD3	YOR216C	CRR1	Q05790	422 aa		4.28	□□□□□ -1.72
RUD3	YOR216C	CDC43	P18898	376 aa		4.27	□□□□□ -1.73
RUD3	YOR216C	ADY2	P25613	283 aa		4.27	□□□□□ -1.73
RUD3	YOR216C	VHR1	P40522	640 aa		4.27	□□□□□ -1.73
RUD3	YOR216C	RIA1	P53893	1110 aa		4.27	□□□□□ -1.73
RUD3	YOR216C	OPI10	Q08202	246 aa		4.27	□□□□□ -1.73
RUD3	YOR216C	MET6	P05694	767 aa	Known RBP	4.26	□□□□□ -1.73
RUD3	YOR216C	KIN3	P22209	435 aa		4.25	□□□□□ -1.73
RUD3	YOR216C	URA1	P28272	314 aa	Predicted RBP	4.25	□□□□□ -1.73
RUD3	YOR216C	TOK1	P40310	691 aa		4.25	□□□□□ -1.73
RUD3	YOR216C	CCM1	P48237	864 aa	Predicted RBP	4.25	□□□□□ -1.73
RUD3	YOR216C	CWC24	P53769	259 aa		4.25	□□□□□ -1.73
RUD3	YOR216C	ASI2	P53895	289 aa		4.25	□□□□□ -1.73
RUD3	YOR216C	THI7	Q05998	598 aa		4.25	□□□□□ -1.73
RUD3	YOR216C	PRI2	P20457	528 aa		4.24	□□□□□ -1.73
RUD3	YOR216C	GGA2	P38817	585 aa	Known RBP	4.24	□□□□□ -1.73
RUD3	YOR216C	AMA1	P50082	593 aa		4.24	□□□□□ -1.73
RUD3	YOR216C	SEC5	P89102	971 aa		4.24	□□□□□ -1.73
RUD3	YOR216C	IRC13	Q08630	104 aa		4.24	□□□□□ -1.73
RUD3	YOR216C	CLN2	P20438	545 aa		4.24	□□□□□ -1.73
RUD3	YOR216C	GLO1	P50107	326 aa		4.24	□□□□□ -1.73
RUD3	YOR216C	MRP8	P35719	219 aa		4.23	□□□□□ -1.73
RUD3	YOR216C	PBY1	P38254	753 aa		4.23	□□□□□ -1.73
RUD3	YOR216C	HBS1	P32769	611 aa	Known RBP	4.22	□□□□□ -1.73
RUD3	YOR216C	PKH1	Q03407	766 aa		4.22	□□□□□ -1.73
RUD3	YOR216C	LCD1	Q04377	747 aa		4.22	□□□□□ -1.73
RUD3	YOR216C	PIN2	Q12057	282 aa		4.22	□□□□□ -1.73
RUD3	YOR216C	RPS9A	O13516	197 aa	Known RBP	4.21	□□□□□ -1.74
RUD3	YOR216C	REC104	P33323	182 aa		4.21	□□□□□ -1.74
RUD3	YOR216C	YIR042C	P40586	236 aa		4.21	□□□□□ -1.74
RUD3	YOR216C	MUS81	Q04149	632 aa	Predicted RBP	4.21	□□□□□ -1.74
RUD3	YOR216C	SGO1	Q08490	590 aa		4.21	□□□□□ -1.74
RUD3	YOR216C	DMC1	P25453	334 aa		4.2	□□□□□ -1.74
RUD3	YOR216C	MAD1	P40957	749 aa		4.2	□□□□□ -1.74
RUD3	YOR216C	PUS2	P53167	370 aa		4.2	□□□□□ -1.74
RUD3	YOR216C	TPO2	P53283	614 aa		4.2	□□□□□ -1.74
RUD3	YOR216C	DUS1	P53759	423 aa	Known RBP	4.2	□□□□□ -1.74
RUD3	YOR216C	NRG1	Q03125	231 aa		4.2	□□□□□ -1.74
RUD3	YOR216C	HAL9	Q12180	1030 aa		4.2	□□□□□ -1.74
RUD3	YOR216C	MPH2	P0CD99	609 aa		4.19	□□□□□ -1.74
RUD3	YOR216C	CBR1	P38626	284 aa	Known RBP	4.19	□□□□□ -1.74
RUD3	YOR216C	APM1	Q00776	475 aa	Predicted RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms