RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAT1	YOR048C	FMS1	P50264	508 aa		5.7	□□□□□ -1.5
RAT1	YOR048C	MST1	P07236	462 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	SRV2	P17555	526 aa	Known RBP	5.69	□□□□□ -1.5
RAT1	YOR048C	ILV6	P25605	309 aa	Known RBP	5.69	□□□□□ -1.5
RAT1	YOR048C	TRZ1	P36159	838 aa	Predicted RBP	5.69	□□□□□ -1.5
RAT1	YOR048C	ERP5	P38819	212 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	DAS1	P47005	663 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	UTP6	Q02354	440 aa	Known RBP	5.69	□□□□□ -1.5
RAT1	YOR048C	RNY1	Q02933	434 aa	Known RBP	5.69	□□□□□ -1.5
RAT1	YOR048C	FRA1	Q07825	749 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	YOR059C	Q08448	450 aa	Known RBP	5.69	□□□□□ -1.5
RAT1	YOR048C	ARP6	Q12509	438 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	CHS2	P14180	963 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	MVD1	P32377	396 aa	Known RBP	5.69	□□□□□ -1.5
RAT1	YOR048C	TPS3	P38426	1054 aa	Known RBP	5.69	□□□□□ -1.5
RAT1	YOR048C	CBR1	P38626	284 aa	Known RBP	5.69	□□□□□ -1.5
RAT1	YOR048C	CCT3	P39077	534 aa	Known RBP	5.69	□□□□□ -1.5
RAT1	YOR048C	TPO2	P53283	614 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	GTR1	Q00582	310 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	FAR8	Q05040	523 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	STB3	Q12427	513 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	MYO1	P08964	1928 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	UBP13	P38187	747 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	MSG5	P38590	489 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	VPS45	P38932	577 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	SAP185	P40856	1058 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	ERP6	P53198	216 aa		5.69	□□□□□ -1.5
RAT1	YOR048C	VIP1	Q06685	1146 aa	Known RBP	5.69	□□□□□ -1.5
RAT1	YOR048C	ESS1	P22696	170 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	ASF1	P32447	279 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	UBP14	P38237	781 aa	Known RBP	5.68	□□□□□ -1.5
RAT1	YOR048C	TIF5	P38431	405 aa	Known RBP	5.68	□□□□□ -1.5
RAT1	YOR048C	VHR2	P40041	505 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	LCB2	P40970	561 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	CLA4	P48562	842 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	VPS4	P52917	437 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	MSN5	P52918	1224 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	VPS72	Q03388	795 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	TDA9	Q04545	1251 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	DPL1	Q05567	589 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	PLP2	Q12017	286 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	RRD2	Q12461	358 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	RTP1	Q12751	981 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
RAT1	YOR048C	MEF1	P25039	761 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	YBL028C	P38202	106 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	TOM71	P38825	639 aa	Known RBP	5.68	□□□□□ -1.5
RAT1	YOR048C	YJL107C	P42947	387 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	AVT1	P47082	602 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	JJJ1	P53863	590 aa		5.68	□□□□□ -1.5
RAT1	YOR048C	TUB2	P02557	457 aa	Known RBP	5.67	□□□□□ -1.5
RAT1	YOR048C	DAL2	P25335	343 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	CDC48	P25694	835 aa	Known RBP	5.67	□□□□□ -1.5
RAT1	YOR048C	MGT1	P26188	188 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	SSE1	P32589	693 aa	Known RBP	5.67	□□□□□ -1.5
RAT1	YOR048C	UBC6	P33296	250 aa	Predicted RBP	5.67	□□□□□ -1.5
RAT1	YOR048C	KTR2	P33550	425 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	STE13	P33894	931 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
RAT1	YOR048C	VHC1	P38329	1120 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	LAM1	P38851	1228 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	TIF4631	P39935	952 aa	Known RBP	5.67	□□□□□ -1.5
RAT1	YOR048C	TDA10	P42938	290 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	TAF1	P46677	1066 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	TMA22	P47089	198 aa	Predicted RBP	5.67	□□□□□ -1.5
RAT1	YOR048C	FAR11	P53917	953 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	YNL040W	P53960	456 aa	Predicted RBP	5.67	□□□□□ -1.5
RAT1	YOR048C	ORC4	P54791	529 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	RPL24A	P04449	155 aa	Known RBP	5.67	□□□□□ -1.5
RAT1	YOR048C	SHP1	P34223	423 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	YNL144C	P53907	740 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	TEP1	P53916	434 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	TBF1	Q02457	562 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	SEN54	Q02825	467 aa	Predicted RBP	5.67	□□□□□ -1.5
RAT1	YOR048C	BUL2	Q03758	920 aa	Known RBP	5.67	□□□□□ -1.5
RAT1	YOR048C	YLR297W	Q05899	129 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	SEY1	Q99287	776 aa		5.67	□□□□□ -1.5
RAT1	YOR048C	SEC14	P24280	304 aa	Known RBP	5.66	□□□□□ -1.5
RAT1	YOR048C	TOS1	P38288	455 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	REV7	P38927	245 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	DSE1	P40077	573 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	YGR021W	P53212	290 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	NOG2	P53742	486 aa	Known RBP	5.66	□□□□□ -1.5
RAT1	YOR048C	SPO19	Q03029	223 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	YMR187C	Q03236	431 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	TCO89	Q08921	799 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	RAD3	P06839	778 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	REC107	P21651	314 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	SCJ1	P25303	377 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	YCR051W	P25631	222 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	PUP2	P32379	260 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	YSC84	P32793	468 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	GEF1	P37020	779 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	RNR4	P49723	345 aa	Known RBP	5.66	□□□□□ -1.5
RAT1	YOR048C	SNU71	P53207	620 aa	Known RBP	5.66	□□□□□ -1.5
RAT1	YOR048C	CLF1	Q12309	687 aa	Predicted RBP	5.66	□□□□□ -1.5
RAT1	YOR048C	NCA2	Q12374	616 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	END3	P39013	349 aa		5.66	□□□□□ -1.5
RAT1	YOR048C	ALA1	P40825	983 aa	Known RBP	5.66	□□□□□ -1.5
RAT1	YOR048C	EMW1	P42842	904 aa	Known RBP	5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms