RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	TRK2	P28584	889 aa		4.99	□□□□□ -1.61
PMS1	YNL082W	NAM7	P30771	971 aa	Known RBP	4.99	□□□□□ -1.61
PMS1	YNL082W	YKR051W	P36142	418 aa		4.99	□□□□□ -1.61
PMS1	YNL082W	FAT1	P38225	669 aa		4.99	□□□□□ -1.61
PMS1	YNL082W	PIP2	P52960	996 aa		4.99	□□□□□ -1.61
PMS1	YNL082W	TNA1	P53322	534 aa		4.99	□□□□□ -1.61
PMS1	YNL082W	TRE2	Q08693	809 aa		4.99	□□□□□ -1.61
PMS1	YNL082W	HRK1	Q08732	759 aa	Known RBP	4.99	□□□□□ -1.61
PMS1	YNL082W	YAP1801	P38856	637 aa		4.99	□□□□□ -1.61
PMS1	YNL082W	ECM16	Q04217	1267 aa	Known RBP	4.99	□□□□□ -1.61
PMS1	YNL082W	DCS2	Q12123	353 aa		4.99	□□□□□ -1.61
PMS1	YNL082W	AI3	P03877	415 aa		4.98	□□□□□ -1.61
PMS1	YNL082W	ATP12	P22135	325 aa		4.98	□□□□□ -1.61
PMS1	YNL082W	FUN30	P31380	1131 aa		4.98	□□□□□ -1.61
PMS1	YNL082W	ECM21	P38167	1117 aa	Known RBP	4.98	□□□□□ -1.61
PMS1	YNL082W	PEX7	P39108	375 aa		4.98	□□□□□ -1.61
PMS1	YNL082W	MNN11	P46985	422 aa	Known RBP	4.98	□□□□□ -1.61
PMS1	YNL082W	ENV11	P53246	860 aa		4.98	□□□□□ -1.61
PMS1	YNL082W	YOR059C	Q08448	450 aa	Known RBP	4.98	□□□□□ -1.61
PMS1	YNL082W	RPD3	P32561	433 aa		4.98	□□□□□ -1.61
PMS1	YNL082W	PIK1	P39104	1066 aa		4.98	□□□□□ -1.61
PMS1	YNL082W	DAS1	P47005	663 aa		4.98	□□□□□ -1.61
PMS1	YNL082W	YGR021W	P53212	290 aa		4.98	□□□□□ -1.61
PMS1	YNL082W	LEE1	Q02799	301 aa	Known RBP	4.98	□□□□□ -1.61
PMS1	YNL082W	NHX1	Q04121	633 aa		4.98	□□□□□ -1.61
PMS1	YNL082W	GPR1	Q12361	961 aa		4.98	□□□□□ -1.61
PMS1	YNL082W	THO2	P53552	1597 aa	Known RBP	4.97	□□□□□ -1.61
PMS1	YNL082W	MPH2	P0CD99	609 aa		4.97	□□□□□ -1.61
PMS1	YNL082W	MNN4	P36044	1178 aa		4.97	□□□□□ -1.61
PMS1	YNL082W	BOI2	P39969	1040 aa		4.97	□□□□□ -1.61
PMS1	YNL082W	ECM38	Q05902	660 aa	Predicted RBP	4.97	□□□□□ -1.61
PMS1	YNL082W	YDL121C	Q07541	149 aa		4.97	□□□□□ -1.61
PMS1	YNL082W	THI21	Q08975	551 aa		4.97	□□□□□ -1.61
PMS1	YNL082W	YLR149C	Q99296	730 aa		4.97	□□□□□ -1.61
PMS1	YNL082W	OYE3	P41816	400 aa	Predicted RBP	4.97	□□□□□ -1.61
PMS1	YNL082W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
PMS1	YNL082W	SSL1	Q04673	461 aa	Predicted RBP	4.97	□□□□□ -1.61
PMS1	YNL082W	KAR1	P11927	433 aa		4.96	□□□□□ -1.61
PMS1	YNL082W	SFA1	P32771	386 aa		4.96	□□□□□ -1.61
PMS1	YNL082W	RPT2	P40327	437 aa	Known RBP	4.96	□□□□□ -1.61
PMS1	YNL082W	RRT14	P40470	206 aa		4.96	□□□□□ -1.61
PMS1	YNL082W	YDR514C	Q04408	483 aa		4.96	□□□□□ -1.61
PMS1	YNL082W	COG8	Q04632	607 aa		4.96	□□□□□ -1.61
PMS1	YNL082W	RSC58	Q07979	502 aa		4.96	□□□□□ -1.61
PMS1	YNL082W	HAL9	Q12180	1030 aa		4.96	□□□□□ -1.61
PMS1	YNL082W	FBP1	P09201	348 aa		4.96	□□□□□ -1.62
PMS1	YNL082W	PGI1	P12709	554 aa	Known RBP	4.96	□□□□□ -1.62
PMS1	YNL082W	YCK2	P23292	546 aa	Known RBP	4.96	□□□□□ -1.62
PMS1	YNL082W	KCC4	P25389	1037 aa		4.96	□□□□□ -1.62
PMS1	YNL082W	URA1	P28272	314 aa	Predicted RBP	4.96	□□□□□ -1.62
PMS1	YNL082W	WHI3	P34761	661 aa	Known RBP	4.96	□□□□□ -1.62
PMS1	YNL082W	PRY1	P47032	299 aa		4.96	□□□□□ -1.62
PMS1	YNL082W	ATG16	Q03818	150 aa		4.96	□□□□□ -1.62
PMS1	YNL082W	MSS18	P08593	268 aa		4.95	□□□□□ -1.62
PMS1	YNL082W	AEP2	P22136	580 aa		4.95	□□□□□ -1.62
PMS1	YNL082W	HSL1	P34244	1518 aa		4.95	□□□□□ -1.62
PMS1	YNL082W	YKL222C	P35995	705 aa		4.95	□□□□□ -1.62
PMS1	YNL082W	KTR4	P38131	464 aa		4.95	□□□□□ -1.62
PMS1	YNL082W	RLP7	P40693	322 aa	Known RBP	4.95	□□□□□ -1.62
PMS1	YNL082W	SPC105	P53148	917 aa		4.95	□□□□□ -1.62
PMS1	YNL082W	HFI1	Q12060	488 aa		4.95	□□□□□ -1.62
PMS1	YNL082W	BIT2	P38346	545 aa		4.95	□□□□□ -1.62
PMS1	YNL082W	SLN1	P39928	1220 aa	Predicted RBP	4.95	□□□□□ -1.62
PMS1	YNL082W	RET2	P43621	546 aa		4.95	□□□□□ -1.62
PMS1	YNL082W	PBP1	P53297	722 aa	Known RBP	4.95	□□□□□ -1.62
PMS1	YNL082W	SUB1	P54000	292 aa	Known RBP	4.95	□□□□□ -1.62
PMS1	YNL082W	UBX4	P54730	416 aa		4.95	□□□□□ -1.62
PMS1	YNL082W	CEG1	Q01159	459 aa	Predicted RBP	4.95	□□□□□ -1.62
PMS1	YNL082W	CIA1	Q05583	330 aa		4.95	□□□□□ -1.62
PMS1	YNL082W	DPH6	Q12429	685 aa		4.95	□□□□□ -1.62
PMS1	YNL082W	YHL012W	P38709	493 aa		4.94	□□□□□ -1.62
PMS1	YNL082W	ASM4	Q05166	528 aa		4.94	□□□□□ -1.62
PMS1	YNL082W	PHM7	Q12252	991 aa		4.94	□□□□□ -1.62
PMS1	YNL082W	RPA135	P22138	1203 aa	Known RBP	4.94	□□□□□ -1.62
PMS1	YNL082W	STE13	P33894	931 aa		4.94	□□□□□ -1.62
PMS1	YNL082W	OAF3	P36023	863 aa		4.94	□□□□□ -1.62
PMS1	YNL082W	YHL041W	P38730	149 aa		4.94	□□□□□ -1.62
PMS1	YNL082W	NOT3	P06102	836 aa	Known RBP	4.93	□□□□□ -1.62
PMS1	YNL082W	EXO84	P38261	753 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	MOT3	P54785	490 aa	Known RBP	4.93	□□□□□ -1.62
PMS1	YNL082W	CDA1	Q06702	301 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	SVS1	Q12254	260 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	APM4	Q99186	491 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	CDC26	P14724	124 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	SRO9	P25567	434 aa	Known RBP	4.93	□□□□□ -1.62
PMS1	YNL082W	ALY2	P47029	1046 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	YGR153W	P48238	217 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	BRE5	P53741	515 aa	Known RBP	4.93	□□□□□ -1.62
PMS1	YNL082W	TDA6	Q06466	467 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	YEF3	P16521	1044 aa	Known RBP	4.93	□□□□□ -1.62
PMS1	YNL082W	PGM1	P33401	570 aa	Known RBP	4.93	□□□□□ -1.62
PMS1	YNL082W	NIC96	P34077	839 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	CEP3	P40969	608 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	YKR011C	Q02209	353 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	REH1	Q06709	432 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	YOR022C	Q12204	715 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	YDR215C	Q12240	137 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	NYV1	Q12255	253 aa		4.93	□□□□□ -1.62
PMS1	YNL082W	MAL31	P38156	614 aa		4.92	□□□□□ -1.62
PMS1	YNL082W	NIT3	P49954	291 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms