RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C RFA1P22336 621 aaKnown RBP6.6□□□□□ -1.35
CTF18YMR078C GPG1P53130 126 aa6.6□□□□□ -1.35
CTF18YMR078C ENV11P53246 860 aa6.6□□□□□ -1.35
CTF18YMR078C PLB2Q03674 706 aa6.6□□□□□ -1.35
CTF18YMR078C SSL1Q04673 461 aaPredicted RBP6.6□□□□□ -1.35
CTF18YMR078C MIH1P23748 554 aa6.6□□□□□ -1.35
CTF18YMR078C STO1P34160 861 aaKnown RBP6.6□□□□□ -1.35
CTF18YMR078C ZRG8P40021 1076 aa6.6□□□□□ -1.35
CTF18YMR078C CEP3P40969 608 aa6.6□□□□□ -1.35
CTF18YMR078C HLJ1P48353 224 aa6.6□□□□□ -1.35
CTF18YMR078C MET13P53128 600 aa6.6□□□□□ -1.35
CTF18YMR078C THI73Q07904 523 aa6.6□□□□□ -1.35
CTF18YMR078C FOL2P51601 243 aaKnown RBP6.59□□□□□ -1.35
CTF18YMR078C YBR182C-AQ8TGU6 64 aa6.59□□□□□ -1.35
CTF18YMR078C SFL1P20134 766 aa6.58□□□□□ -1.36
CTF18YMR078C SDA1P53313 767 aaKnown RBP6.58□□□□□ -1.36
CTF18YMR078C NOG2P53742 486 aaKnown RBP6.58□□□□□ -1.36
CTF18YMR078C YKR011CQ02209 353 aa6.58□□□□□ -1.36
CTF18YMR078C REH1Q06709 432 aa6.58□□□□□ -1.36
CTF18YMR078C HSF1P10961 833 aa6.58□□□□□ -1.36
CTF18YMR078C YEL1P34225 687 aa6.58□□□□□ -1.36
CTF18YMR078C MND2P40577 368 aa6.58□□□□□ -1.36
CTF18YMR078C ENA1P13587 1091 aa6.57□□□□□ -1.36
CTF18YMR078C SNP1Q00916 300 aaPredicted RBP6.57□□□□□ -1.36
CTF18YMR078C ENA2Q01896 1091 aa6.57□□□□□ -1.36
CTF18YMR078C ENA5Q12691 1091 aa6.57□□□□□ -1.36
CTF18YMR078C FBP1P09201 348 aa6.57□□□□□ -1.36
CTF18YMR078C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
CTF18YMR078C CYS3P31373 394 aaKnown RBP6.57□□□□□ -1.36
CTF18YMR078C LRG1P35688 1017 aa6.57□□□□□ -1.36
CTF18YMR078C PCM1P38628 557 aaKnown RBP6.57□□□□□ -1.36
CTF18YMR078C YDR338CQ05497 695 aa6.57□□□□□ -1.36
CTF18YMR078C SSB1P11484 613 aaKnown RBP6.56□□□□□ -1.36
CTF18YMR078C HOG1P32485 435 aa6.56□□□□□ -1.36
CTF18YMR078C TYE7P33122 291 aaPredicted RBP6.56□□□□□ -1.36
CTF18YMR078C SSB2P40150 613 aaKnown RBP6.56□□□□□ -1.36
CTF18YMR078C YGR237CP50089 785 aa6.56□□□□□ -1.36
CTF18YMR078C HAL9Q12180 1030 aa6.56□□□□□ -1.36
CTF18YMR078C LIP5P32875 414 aa6.56□□□□□ -1.36
CTF18YMR078C AIM14P53109 570 aa6.56□□□□□ -1.36
CTF18YMR078C ROT1Q03691 256 aa6.56□□□□□ -1.36
CTF18YMR078C OMA1P36163 345 aa6.55□□□□□ -1.36
CTF18YMR078C RLP7P40693 322 aaKnown RBP6.55□□□□□ -1.36
CTF18YMR078C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
CTF18YMR078C PMT3P47190 753 aa6.55□□□□□ -1.36
CTF18YMR078C UME1Q03010 460 aa6.55□□□□□ -1.36
CTF18YMR078C ATG33Q06485 197 aa6.55□□□□□ -1.36
CTF18YMR078C WHI4Q07655 649 aaKnown RBP6.55□□□□□ -1.36
CTF18YMR078C ADY3Q07732 790 aa6.55□□□□□ -1.36
CTF18YMR078C SPE1P08432 466 aa6.54□□□□□ -1.36
CTF18YMR078C GCV2P49095 1034 aa6.54□□□□□ -1.36
CTF18YMR078C YOR022CQ12204 715 aa6.54□□□□□ -1.36
CTF18YMR078C DFG16Q99234 619 aa6.54□□□□□ -1.36
CTF18YMR078C CDC6P09119 513 aa6.54□□□□□ -1.36
CTF18YMR078C HMG1P12683 1054 aa6.54□□□□□ -1.36
CTF18YMR078C POL12P38121 705 aaPredicted RBP6.54□□□□□ -1.36
CTF18YMR078C ALY2P47029 1046 aa6.54□□□□□ -1.36
CTF18YMR078C SGD1Q06132 899 aa6.54□□□□□ -1.36
CTF18YMR078C TPO1Q07824 586 aa6.54□□□□□ -1.36
CTF18YMR078C THI21Q08975 551 aa6.54□□□□□ -1.36
CTF18YMR078C YIL108WP40483 696 aaKnown RBP6.53□□□□□ -1.36
CTF18YMR078C NUP145P49687 1317 aa6.53□□□□□ -1.36
CTF18YMR078C RPS9AO13516 197 aaKnown RBP6.53□□□□□ -1.36
CTF18YMR078C GTF1P53260 183 aaPredicted RBP6.53□□□□□ -1.36
CTF18YMR078C DUS4Q06063 367 aa6.53□□□□□ -1.36
CTF18YMR078C TYS1P36421 394 aaKnown RBP6.52□□□□□ -1.37
CTF18YMR078C LAM1P38851 1228 aa6.52□□□□□ -1.37
CTF18YMR078C SNO2P53823 222 aa6.52□□□□□ -1.37
CTF18YMR078C MTQ2Q03920 221 aaPredicted RBP6.52□□□□□ -1.37
CTF18YMR078C GUP2Q08929 609 aa6.52□□□□□ -1.37
CTF18YMR078C MRPL22P53881 309 aa6.52□□□□□ -1.37
CTF18YMR078C NHX1Q04121 633 aa6.52□□□□□ -1.37
CTF18YMR078C SET5P38890 526 aaKnown RBP6.51□□□□□ -1.37
CTF18YMR078C GPP1P41277 250 aaKnown RBP6.51□□□□□ -1.37
CTF18YMR078C YJR096WP47137 282 aa6.51□□□□□ -1.37
CTF18YMR078C COG8Q04632 607 aa6.51□□□□□ -1.37
CTF18YMR078C PRC1P00729 532 aa6.5□□□□□ -1.37
CTF18YMR078C TOM20P35180 183 aa6.5□□□□□ -1.37
CTF18YMR078C URM1P40554 99 aaPredicted RBP6.5□□□□□ -1.37
CTF18YMR078C MET12P46151 657 aa6.5□□□□□ -1.37
CTF18YMR078C DUS1P53759 423 aaKnown RBP6.5□□□□□ -1.37
CTF18YMR078C VPS30Q02948 557 aa6.5□□□□□ -1.37
CTF18YMR078C HMI1Q12039 706 aa6.5□□□□□ -1.37
CTF18YMR078C GIN4Q12263 1142 aa6.5□□□□□ -1.37
CTF18YMR078C DIF1O13577 133 aa6.5□□□□□ -1.37
CTF18YMR078C TSA1P34760 196 aaKnown RBP6.5□□□□□ -1.37
CTF18YMR078C POA1P38218 177 aa6.5□□□□□ -1.37
CTF18YMR078C MEF2P39677 819 aa6.5□□□□□ -1.37
CTF18YMR078C PSP2P50109 593 aaKnown RBP6.5□□□□□ -1.37
CTF18YMR078C UBC9P50623 157 aaPredicted RBP6.5□□□□□ -1.37
CTF18YMR078C GUD1Q07729 489 aa6.5□□□□□ -1.37
CTF18YMR078C CCR4P31384 837 aaKnown RBP6.49□□□□□ -1.37
CTF18YMR078C SAP190P36123 1033 aa6.49□□□□□ -1.37
CTF18YMR078C YDR132CQ03900 495 aa6.49□□□□□ -1.37
CTF18YMR078C UPC2Q12151 913 aa6.49□□□□□ -1.37
CTF18YMR078C Q0142Q9ZZW4 58 aa6.49□□□□□ -1.37
CTF18YMR078C STE14P32584 239 aa6.49□□□□□ -1.37
CTF18YMR078C PAF1P38351 445 aa6.49□□□□□ -1.37
CTF18YMR078C RPN10P38886 268 aaKnown RBP6.49□□□□□ -1.37
CTF18YMR078C CRR1Q05790 422 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 1176 ms