RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C ATG36P46983 293 aa8.12□□□□□ -1.11
ATG17YLR423C SSY1Q03770 852 aa8.12□□□□□ -1.11
ATG17YLR423C XYL2Q07993 356 aa8.12□□□□□ -1.11
ATG17YLR423C MCA1Q08601 432 aa8.12□□□□□ -1.11
ATG17YLR423C GIN4Q12263 1142 aa8.12□□□□□ -1.11
ATG17YLR423C NIT1P40447 199 aa8.11□□□□□ -1.11
ATG17YLR423C YJR120WP47157 116 aa8.11□□□□□ -1.11
ATG17YLR423C AIM14P53109 570 aa8.11□□□□□ -1.11
ATG17YLR423C YPL034WQ03083 165 aa8.11□□□□□ -1.11
ATG17YLR423C NHX1Q04121 633 aa8.11□□□□□ -1.11
ATG17YLR423C GUP2Q08929 609 aa8.11□□□□□ -1.11
ATG17YLR423C YLR122CQ12312 125 aa8.11□□□□□ -1.11
ATG17YLR423C DIF1O13577 133 aa8.1□□□□□ -1.11
ATG17YLR423C CYS3P31373 394 aaKnown RBP8.1□□□□□ -1.11
ATG17YLR423C PCM1P38628 557 aaKnown RBP8.1□□□□□ -1.11
ATG17YLR423C GPP1P41277 250 aaKnown RBP8.1□□□□□ -1.11
ATG17YLR423C YJR096WP47137 282 aa8.1□□□□□ -1.11
ATG17YLR423C PUS2P53167 370 aa8.1□□□□□ -1.11
ATG17YLR423C YGR130CP53278 816 aa8.1□□□□□ -1.11
ATG17YLR423C YPL062WQ02781 134 aa8.1□□□□□ -1.11
ATG17YLR423C ATG33Q06485 197 aa8.1□□□□□ -1.11
ATG17YLR423C TRE2Q08693 809 aa8.1□□□□□ -1.11
ATG17YLR423C SRP101P32916 621 aa8.09□□□□□ -1.11
ATG17YLR423C PGM1P33401 570 aaKnown RBP8.09□□□□□ -1.11
ATG17YLR423C CKB2P38930 258 aa8.09□□□□□ -1.11
ATG17YLR423C RLP7P40693 322 aaKnown RBP8.09□□□□□ -1.11
ATG17YLR423C RAI1P53063 387 aaKnown RBP8.09□□□□□ -1.11
ATG17YLR423C LRS4Q04087 347 aaKnown RBP8.09□□□□□ -1.11
ATG17YLR423C ENA1P13587 1091 aa8.08□□□□□ -1.12
ATG17YLR423C ENA2Q01896 1091 aa8.08□□□□□ -1.12
ATG17YLR423C ENA5Q12691 1091 aa8.08□□□□□ -1.12
ATG17YLR423C PRC1P00729 532 aa8.07□□□□□ -1.12
ATG17YLR423C HMG1P12683 1054 aa8.07□□□□□ -1.12
ATG17YLR423C YCL002CP25565 263 aa8.07□□□□□ -1.12
ATG17YLR423C EUG1P32474 517 aa8.07□□□□□ -1.12
ATG17YLR423C TYE7P33122 291 aaPredicted RBP8.07□□□□□ -1.12
ATG17YLR423C STE13P33894 931 aa8.07□□□□□ -1.12
ATG17YLR423C SKN7P38889 622 aa8.07□□□□□ -1.12
ATG17YLR423C CRR1Q05790 422 aa8.07□□□□□ -1.12
ATG17YLR423C YTM1Q12024 460 aaPredicted RBP8.07□□□□□ -1.12
ATG17YLR423C HSF1P10961 833 aa8.06□□□□□ -1.12
ATG17YLR423C HSL7P38274 827 aa8.06□□□□□ -1.12
ATG17YLR423C SET5P38890 526 aaKnown RBP8.06□□□□□ -1.12
ATG17YLR423C ICP55P40051 511 aa8.06□□□□□ -1.12
ATG17YLR423C ENV11P53246 860 aa8.06□□□□□ -1.12
ATG17YLR423C CYC7P00045 113 aa8.05□□□□□ -1.12
ATG17YLR423C GCD1P09032 578 aaPredicted RBP8.05□□□□□ -1.12
ATG17YLR423C YBR071WP38243 211 aa8.05□□□□□ -1.12
ATG17YLR423C NUG1P40010 520 aaKnown RBP8.05□□□□□ -1.12
ATG17YLR423C ZRG8P40021 1076 aa8.05□□□□□ -1.12
ATG17YLR423C TPM2P40414 161 aa8.05□□□□□ -1.12
ATG17YLR423C YFL052WP43551 465 aa8.05□□□□□ -1.12
ATG17YLR423C PSP2P50109 593 aaKnown RBP8.05□□□□□ -1.12
ATG17YLR423C NPY1P53164 384 aa8.05□□□□□ -1.12
ATG17YLR423C YGR012WP53206 393 aa8.05□□□□□ -1.12
ATG17YLR423C YKR011CQ02209 353 aa8.05□□□□□ -1.12
ATG17YLR423C MSC2Q03455 724 aa8.05□□□□□ -1.12
ATG17YLR423C TMA7Q3E764 64 aaKnown RBP8.05□□□□□ -1.12
ATG17YLR423C TOP1P04786 769 aa8.04□□□□□ -1.12
ATG17YLR423C PEX14P53112 341 aa8.04□□□□□ -1.12
ATG17YLR423C HDA1P53973 706 aa8.04□□□□□ -1.12
ATG17YLR423C YOR022CQ12204 715 aa8.04□□□□□ -1.12
ATG17YLR423C PUS1Q12211 544 aaKnown RBP8.04□□□□□ -1.12
ATG17YLR423C CMP2P14747 604 aa8.03□□□□□ -1.12
ATG17YLR423C RPD3P32561 433 aa8.03□□□□□ -1.12
ATG17YLR423C TDA3P38758 523 aa8.03□□□□□ -1.12
ATG17YLR423C YIL108WP40483 696 aaKnown RBP8.03□□□□□ -1.12
ATG17YLR423C HXT16P47185 567 aa8.03□□□□□ -1.12
ATG17YLR423C YGR153WP48238 217 aa8.03□□□□□ -1.12
ATG17YLR423C UBC9P50623 157 aaPredicted RBP8.03□□□□□ -1.12
ATG17YLR423C PEX8P53248 589 aa8.03□□□□□ -1.12
ATG17YLR423C VTS1Q08831 523 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
ATG17YLR423C YBR182C-AQ8TGU6 64 aa8.03□□□□□ -1.12
ATG17YLR423C ABZ1P37254 787 aaPredicted RBP8.02□□□□□ -1.13
ATG17YLR423C GZF3P42944 551 aaKnown RBP8.02□□□□□ -1.13
ATG17YLR423C COG6P53959 839 aa8.02□□□□□ -1.13
ATG17YLR423C SIZ1Q04195 904 aa8.02□□□□□ -1.13
ATG17YLR423C OAF1P39720 1047 aaPredicted RBP8.01□□□□□ -1.13
ATG17YLR423C YOR352WQ08816 343 aa8.01□□□□□ -1.13
ATG17YLR423C RIB2Q12362 591 aaKnown RBP8.01□□□□□ -1.13
ATG17YLR423C SND1Q04007 877 aa8□□□□□ -1.13
ATG17YLR423C CDA1Q06702 301 aa8□□□□□ -1.13
ATG17YLR423C YPL277CQ08989 487 aa8□□□□□ -1.13
ATG17YLR423C SLX4Q12098 748 aa8□□□□□ -1.13
ATG17YLR423C SEC6P32844 805 aa7.99□□□□□ -1.13
ATG17YLR423C ENP1P38333 483 aaKnown RBP7.99□□□□□ -1.13
ATG17YLR423C DAS1P47005 663 aa7.99□□□□□ -1.13
ATG17YLR423C YDR338CQ05497 695 aa7.99□□□□□ -1.13
ATG17YLR423C RPN7Q06103 429 aaKnown RBP7.99□□□□□ -1.13
ATG17YLR423C NYV1Q12255 253 aa7.99□□□□□ -1.13
ATG17YLR423C CYC1P00044 109 aaPredicted RBP7.98□□□□□ -1.13
ATG17YLR423C AEP2P22136 580 aa7.98□□□□□ -1.13
ATG17YLR423C CCR4P31384 837 aaKnown RBP7.98□□□□□ -1.13
ATG17YLR423C TFC4P33339 1025 aa7.98□□□□□ -1.13
ATG17YLR423C POA1P38218 177 aa7.98□□□□□ -1.13
ATG17YLR423C DUG1P43616 481 aaKnown RBP7.98□□□□□ -1.13
ATG17YLR423C RET2P43621 546 aa7.98□□□□□ -1.13
ATG17YLR423C MNN11P46985 422 aaKnown RBP7.98□□□□□ -1.13
ATG17YLR423C SSL1Q04673 461 aaPredicted RBP7.98□□□□□ -1.13
ATG17YLR423C HAL9Q12180 1030 aa7.98□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms