RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C HXT16P47185 567 aa2.84□□□□□ -1.95
SGD1YLR336C ENV11P53246 860 aa2.84□□□□□ -1.95
SGD1YLR336C GTF1P53260 183 aaPredicted RBP2.84□□□□□ -1.95
SGD1YLR336C YNL193WP53870 558 aa2.84□□□□□ -1.95
SGD1YLR336C MRPL22P53881 309 aa2.84□□□□□ -1.95
SGD1YLR336C WHI4Q07655 649 aaKnown RBP2.84□□□□□ -1.95
SGD1YLR336C SCT1P32784 759 aa2.84□□□□□ -1.96
SGD1YLR336C SEG2P34250 1132 aa2.84□□□□□ -1.96
SGD1YLR336C MAC1P35192 417 aa2.84□□□□□ -1.96
SGD1YLR336C MCD4P36051 919 aa2.84□□□□□ -1.96
SGD1YLR336C YNR029CP53729 429 aaKnown RBP2.84□□□□□ -1.96
SGD1YLR336C YDR514CQ04408 483 aa2.84□□□□□ -1.96
SGD1YLR336C SGD1Q06132 899 aa2.84□□□□□ -1.96
SGD1YLR336C HSF1P10961 833 aa2.83□□□□□ -1.96
SGD1YLR336C LAM1P38851 1228 aa2.83□□□□□ -1.96
SGD1YLR336C YKR011CQ02209 353 aa2.83□□□□□ -1.96
SGD1YLR336C CDC6P09119 513 aa2.83□□□□□ -1.96
SGD1YLR336C RAD18P10862 487 aa2.83□□□□□ -1.96
SGD1YLR336C GSY1P23337 708 aa2.83□□□□□ -1.96
SGD1YLR336C PCL2P25693 308 aa2.83□□□□□ -1.96
SGD1YLR336C SFP1P32432 683 aa2.83□□□□□ -1.96
SGD1YLR336C TSA1P34760 196 aaKnown RBP2.83□□□□□ -1.96
SGD1YLR336C MEF2P39677 819 aa2.83□□□□□ -1.96
SGD1YLR336C CAF16P43569 289 aa2.83□□□□□ -1.96
SGD1YLR336C SNO2P53823 222 aa2.83□□□□□ -1.96
SGD1YLR336C DUS4Q06063 367 aa2.83□□□□□ -1.96
SGD1YLR336C TPO1Q07824 586 aa2.83□□□□□ -1.96
SGD1YLR336C CYS3P31373 394 aaKnown RBP2.82□□□□□ -1.96
SGD1YLR336C TYE7P33122 291 aaPredicted RBP2.82□□□□□ -1.96
SGD1YLR336C CRP1P38845 465 aaKnown RBP2.82□□□□□ -1.96
SGD1YLR336C YIL108WP40483 696 aaKnown RBP2.82□□□□□ -1.96
SGD1YLR336C NOG2P53742 486 aaKnown RBP2.82□□□□□ -1.96
SGD1YLR336C ADY3Q07732 790 aa2.82□□□□□ -1.96
SGD1YLR336C HAL9Q12180 1030 aa2.82□□□□□ -1.96
SGD1YLR336C YBR182C-AQ8TGU6 64 aa2.82□□□□□ -1.96
SGD1YLR336C SPE1P08432 466 aa2.82□□□□□ -1.96
SGD1YLR336C FBP1P09201 348 aa2.82□□□□□ -1.96
SGD1YLR336C MIH1P23748 554 aa2.82□□□□□ -1.96
SGD1YLR336C GRX4P32642 244 aa2.82□□□□□ -1.96
SGD1YLR336C YOR022CQ12204 715 aa2.82□□□□□ -1.96
SGD1YLR336C TSR4P25040 408 aa2.81□□□□□ -1.96
SGD1YLR336C STO1P34160 861 aaKnown RBP2.81□□□□□ -1.96
SGD1YLR336C POA1P38218 177 aa2.81□□□□□ -1.96
SGD1YLR336C UBP12P39538 1254 aa2.81□□□□□ -1.96
SGD1YLR336C ECL1P48235 211 aa2.81□□□□□ -1.96
SGD1YLR336C MET13P53128 600 aa2.81□□□□□ -1.96
SGD1YLR336C YDR132CQ03900 495 aa2.81□□□□□ -1.96
SGD1YLR336C REH1Q06709 432 aa2.81□□□□□ -1.96
SGD1YLR336C HMI1Q12039 706 aa2.81□□□□□ -1.96
SGD1YLR336C RPS9AO13516 197 aaKnown RBP2.81□□□□□ -1.96
SGD1YLR336C SFL1P20134 766 aa2.81□□□□□ -1.96
SGD1YLR336C RLP7P40693 322 aaKnown RBP2.81□□□□□ -1.96
SGD1YLR336C MET12P46151 657 aa2.81□□□□□ -1.96
SGD1YLR336C HLJ1P48353 224 aa2.81□□□□□ -1.96
SGD1YLR336C YDR338CQ05497 695 aa2.81□□□□□ -1.96
SGD1YLR336C CDA2Q06703 312 aa2.81□□□□□ -1.96
SGD1YLR336C EMC1P25574 760 aa2.8□□□□□ -1.96
SGD1YLR336C ALY2P47029 1046 aa2.8□□□□□ -1.96
SGD1YLR336C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
SGD1YLR336C PSP2P50109 593 aaKnown RBP2.8□□□□□ -1.96
SGD1YLR336C AIM14P53109 570 aa2.8□□□□□ -1.96
SGD1YLR336C SNP1Q00916 300 aaPredicted RBP2.8□□□□□ -1.96
SGD1YLR336C GCN5Q03330 439 aa2.8□□□□□ -1.96
SGD1YLR336C THI73Q07904 523 aa2.8□□□□□ -1.96
SGD1YLR336C GPB1Q08886 897 aa2.8□□□□□ -1.96
SGD1YLR336C GAS1P22146 559 aaKnown RBP2.8□□□□□ -1.96
SGD1YLR336C HOG1P32485 435 aa2.8□□□□□ -1.96
SGD1YLR336C SAP190P36123 1033 aa2.8□□□□□ -1.96
SGD1YLR336C AIM3P38266 947 aaKnown RBP2.8□□□□□ -1.96
SGD1YLR336C PCM1P38628 557 aaKnown RBP2.8□□□□□ -1.96
SGD1YLR336C MGS1P40151 587 aa2.8□□□□□ -1.96
SGD1YLR336C URM1P40554 99 aaPredicted RBP2.8□□□□□ -1.96
SGD1YLR336C GPG1P53130 126 aa2.8□□□□□ -1.96
SGD1YLR336C VPS62P53285 467 aa2.8□□□□□ -1.96
SGD1YLR336C SDA1P53313 767 aaKnown RBP2.8□□□□□ -1.96
SGD1YLR336C VPS30Q02948 557 aa2.8□□□□□ -1.96
SGD1YLR336C YAP6Q03935 383 aa2.8□□□□□ -1.96
SGD1YLR336C YOR352WQ08816 343 aa2.8□□□□□ -1.96
SGD1YLR336C THI21Q08975 551 aa2.8□□□□□ -1.96
SGD1YLR336C YPL277CQ08989 487 aa2.8□□□□□ -1.96
SGD1YLR336C UPC2Q12151 913 aa2.8□□□□□ -1.96
SGD1YLR336C PRC1P00729 532 aa2.79□□□□□ -1.96
SGD1YLR336C RPS13P05756 151 aaKnown RBP2.79□□□□□ -1.96
SGD1YLR336C HIS5P07172 385 aa2.79□□□□□ -1.96
SGD1YLR336C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
SGD1YLR336C STE14P32584 239 aa2.79□□□□□ -1.96
SGD1YLR336C YEN1P40028 759 aa2.79□□□□□ -1.96
SGD1YLR336C CHA4P43634 648 aa2.79□□□□□ -1.96
SGD1YLR336C CRR1Q05790 422 aa2.79□□□□□ -1.96
SGD1YLR336C ATG33Q06485 197 aa2.79□□□□□ -1.96
SGD1YLR336C HMG1P12683 1054 aa2.79□□□□□ -1.96
SGD1YLR336C CDC20P26309 610 aa2.79□□□□□ -1.96
SGD1YLR336C SET5P38890 526 aaKnown RBP2.79□□□□□ -1.96
SGD1YLR336C SHR5P41912 237 aa2.79□□□□□ -1.96
SGD1YLR336C NCS6P53088 359 aa2.79□□□□□ -1.96
SGD1YLR336C PBP1P53297 722 aaKnown RBP2.79□□□□□ -1.96
SGD1YLR336C DUS1P53759 423 aaKnown RBP2.79□□□□□ -1.96
SGD1YLR336C Q0142Q9ZZW4 58 aa2.79□□□□□ -1.96
SGD1YLR336C DIF1O13577 133 aa2.78□□□□□ -1.96
SGD1YLR336C RNQ1P25367 405 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms