RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C TDP1P38319 544 aa3.89□□□□□ -1.79
RPL40BYKR094C DAS1P47005 663 aa3.89□□□□□ -1.79
RPL40BYKR094C DLT1Q04216 342 aa3.89□□□□□ -1.79
RPL40BYKR094C ADY4Q05955 493 aa3.89□□□□□ -1.79
RPL40BYKR094C TRM11Q12463 433 aa3.89□□□□□ -1.79
RPL40BYKR094C ASF1P32447 279 aa3.88□□□□□ -1.79
RPL40BYKR094C PPZ2P33329 710 aa3.88□□□□□ -1.79
RPL40BYKR094C VBA5P36172 582 aa3.88□□□□□ -1.79
RPL40BYKR094C YIL108WP40483 696 aaKnown RBP3.88□□□□□ -1.79
RPL40BYKR094C MRPS35P53292 345 aa3.88□□□□□ -1.79
RPL40BYKR094C YML020WQ03722 664 aa3.88□□□□□ -1.79
RPL40BYKR094C SWM1Q12379 170 aa3.88□□□□□ -1.79
RPL40BYKR094C MDM10P18409 493 aa3.87□□□□□ -1.79
RPL40BYKR094C ERT1P38140 529 aa3.87□□□□□ -1.79
RPL40BYKR094C CTF8P38877 133 aa3.87□□□□□ -1.79
RPL40BYKR094C FKH2P41813 862 aa3.87□□□□□ -1.79
RPL40BYKR094C MUP1P50276 574 aa3.87□□□□□ -1.79
RPL40BYKR094C VPS30Q02948 557 aa3.87□□□□□ -1.79
RPL40BYKR094C CAF20P12962 161 aaKnown RBP3.86□□□□□ -1.79
RPL40BYKR094C KRI1P42846 591 aaKnown RBP3.86□□□□□ -1.79
RPL40BYKR094C GFA1P14742 717 aaKnown RBP3.85□□□□□ -1.79
RPL40BYKR094C PRP4P20053 465 aaKnown RBP3.85□□□□□ -1.79
RPL40BYKR094C YKL069WP36088 180 aa3.85□□□□□ -1.79
RPL40BYKR094C YRO2P38079 344 aa3.85□□□□□ -1.79
RPL40BYKR094C RPP1P38786 293 aa3.85□□□□□ -1.79
RPL40BYKR094C PCL5P38794 229 aa3.85□□□□□ -1.79
RPL40BYKR094C RIX1P38883 763 aaPredicted RBP3.85□□□□□ -1.79
RPL40BYKR094C IMO32P53219 342 aa3.85□□□□□ -1.79
RPL40BYKR094C RFA1P22336 621 aaKnown RBP3.84□□□□□ -1.79
RPL40BYKR094C AAR2P32357 355 aaPredicted RBP3.84□□□□□ -1.79
RPL40BYKR094C TYE7P33122 291 aaPredicted RBP3.84□□□□□ -1.79
RPL40BYKR094C FLO10P36170 1169 aa3.84□□□□□ -1.79
RPL40BYKR094C CEP3P40969 608 aa3.84□□□□□ -1.79
RPL40BYKR094C TAH11P47112 604 aa3.84□□□□□ -1.79
RPL40BYKR094C VPS73P53142 486 aaKnown RBP3.84□□□□□ -1.79
RPL40BYKR094C VPS16Q03308 798 aa3.84□□□□□ -1.79
RPL40BYKR094C CRR1Q05790 422 aa3.84□□□□□ -1.79
RPL40BYKR094C NOP8Q08287 484 aaPredicted RBP3.84□□□□□ -1.79
RPL40BYKR094C ADE8P04161 214 aa3.83□□□□□ -1.8
RPL40BYKR094C YBR053CP38235 358 aa3.83□□□□□ -1.8
RPL40BYKR094C HDA1P53973 706 aa3.83□□□□□ -1.8
RPL40BYKR094C YKR011CQ02209 353 aa3.83□□□□□ -1.8
RPL40BYKR094C SHE9Q04172 456 aa3.83□□□□□ -1.8
RPL40BYKR094C AFT2Q08957 416 aa3.83□□□□□ -1.8
RPL40BYKR094C TUB1P09733 447 aaKnown RBP3.82□□□□□ -1.8
RPL40BYKR094C PRI2P20457 528 aa3.82□□□□□ -1.8
RPL40BYKR094C YHR078WP38799 552 aa3.82□□□□□ -1.8
RPL40BYKR094C YJL163CP46996 555 aa3.82□□□□□ -1.8
RPL40BYKR094C BUL2Q03758 920 aaKnown RBP3.82□□□□□ -1.8
RPL40BYKR094C MET6P05694 767 aaKnown RBP3.81□□□□□ -1.8
RPL40BYKR094C HCA4P20448 770 aaKnown RBP3.81□□□□□ -1.8
RPL40BYKR094C URA1P28272 314 aaPredicted RBP3.81□□□□□ -1.8
RPL40BYKR094C SIT1P39980 628 aa3.81□□□□□ -1.8
RPL40BYKR094C VHR1P40522 640 aa3.81□□□□□ -1.8
RPL40BYKR094C CWC24P53769 259 aa3.81□□□□□ -1.8
RPL40BYKR094C COQ11Q05892 277 aa3.81□□□□□ -1.8
RPL40BYKR094C OPI10Q08202 246 aa3.81□□□□□ -1.8
RPL40BYKR094C GGA2P38817 585 aaKnown RBP3.8□□□□□ -1.8
RPL40BYKR094C TOK1P40310 691 aa3.8□□□□□ -1.8
RPL40BYKR094C HOF1Q05080 669 aa3.8□□□□□ -1.8
RPL40BYKR094C YNL162W-AQ3E7A8 72 aa3.8□□□□□ -1.8
RPL40BYKR094C CDC43P18898 376 aa3.79□□□□□ -1.8
RPL40BYKR094C KIN3P22209 435 aa3.79□□□□□ -1.8
RPL40BYKR094C CCM1P48237 864 aaPredicted RBP3.79□□□□□ -1.8
RPL40BYKR094C RIA1P53893 1110 aa3.79□□□□□ -1.8
RPL40BYKR094C ASI2P53895 289 aa3.79□□□□□ -1.8
RPL40BYKR094C IRC13Q08630 104 aa3.79□□□□□ -1.8
RPL40BYKR094C RPS9AO13516 197 aaKnown RBP3.78□□□□□ -1.8
RPL40BYKR094C CLN2P20438 545 aa3.78□□□□□ -1.8
RPL40BYKR094C MAD1P40957 749 aa3.78□□□□□ -1.8
RPL40BYKR094C PUS2P53167 370 aa3.78□□□□□ -1.8
RPL40BYKR094C ARO10Q06408 635 aa3.78□□□□□ -1.8
RPL40BYKR094C YAP7Q08182 245 aa3.78□□□□□ -1.8
RPL40BYKR094C ADY2P25613 283 aa3.77□□□□□ -1.81
RPL40BYKR094C HBS1P32769 611 aaKnown RBP3.77□□□□□ -1.81
RPL40BYKR094C MRP8P35719 219 aa3.77□□□□□ -1.81
RPL40BYKR094C PBY1P38254 753 aa3.77□□□□□ -1.81
RPL40BYKR094C TPO2P53283 614 aa3.77□□□□□ -1.81
RPL40BYKR094C PKH1Q03407 766 aa3.77□□□□□ -1.81
RPL40BYKR094C LCD1Q04377 747 aa3.77□□□□□ -1.81
RPL40BYKR094C THI7Q05998 598 aa3.77□□□□□ -1.81
RPL40BYKR094C PIN2Q12057 282 aa3.77□□□□□ -1.81
RPL40BYKR094C YIL166CP40445 542 aa3.76□□□□□ -1.81
RPL40BYKR094C AMA1P50082 593 aa3.76□□□□□ -1.81
RPL40BYKR094C DUS1P53759 423 aaKnown RBP3.76□□□□□ -1.81
RPL40BYKR094C HAL9Q12180 1030 aa3.76□□□□□ -1.81
RPL40BYKR094C ICT1Q12385 394 aa3.76□□□□□ -1.81
RPL40BYKR094C ILV6P25605 309 aaKnown RBP3.75□□□□□ -1.81
RPL40BYKR094C STE5P32917 917 aa3.75□□□□□ -1.81
RPL40BYKR094C REC104P33323 182 aa3.75□□□□□ -1.81
RPL40BYKR094C MUS81Q04149 632 aaPredicted RBP3.75□□□□□ -1.81
RPL40BYKR094C HIS7P33734 552 aaKnown RBP3.74□□□□□ -1.81
RPL40BYKR094C CBR1P38626 284 aaKnown RBP3.74□□□□□ -1.81
RPL40BYKR094C YIR042CP40586 236 aa3.74□□□□□ -1.81
RPL40BYKR094C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
RPL40BYKR094C NRG1Q03125 231 aa3.74□□□□□ -1.81
RPL40BYKR094C ASM4Q05166 528 aa3.74□□□□□ -1.81
RPL40BYKR094C SGO1Q08490 590 aa3.74□□□□□ -1.81
RPL40BYKR094C YPR071WQ12346 211 aa3.74□□□□□ -1.81
RPL40BYKR094C MPH2P0CD99 609 aa3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms