RNA–Protein interactions for RNA: YKL109W

HAP4, Transcript of Transcription factor, yeast

Gene HAP4, Length 1,665 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAP4	YKL109W	NOG2	P53742	486 aa	Known RBP	4.89	□□□□□ -1.63
HAP4	YKL109W	YNL034W	P53963	612 aa		4.89	□□□□□ -1.63
HAP4	YKL109W	YNL018C	P53976	612 aa		4.89	□□□□□ -1.63
HAP4	YKL109W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
HAP4	YKL109W	YDR338C	Q05497	695 aa		4.89	□□□□□ -1.63
HAP4	YKL109W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
HAP4	YKL109W	THI72	Q08579	599 aa		4.89	□□□□□ -1.63
HAP4	YKL109W	RFA1	P22336	621 aa	Known RBP	4.89	□□□□□ -1.63
HAP4	YKL109W	TFC4	P33339	1025 aa		4.89	□□□□□ -1.63
HAP4	YKL109W	ALY2	P47029	1046 aa		4.89	□□□□□ -1.63
HAP4	YKL109W	RCM1	P53972	490 aa		4.89	□□□□□ -1.63
HAP4	YKL109W	YOR059C	Q08448	450 aa	Known RBP	4.89	□□□□□ -1.63
HAP4	YKL109W	YDR215C	Q12240	137 aa		4.89	□□□□□ -1.63
HAP4	YKL109W	YBR182C-A	Q8TGU6	64 aa		4.89	□□□□□ -1.63
HAP4	YKL109W	CCR4	P31384	837 aa	Known RBP	4.88	□□□□□ -1.63
HAP4	YKL109W	ABZ1	P37254	787 aa	Predicted RBP	4.88	□□□□□ -1.63
HAP4	YKL109W	RLP7	P40693	322 aa	Known RBP	4.88	□□□□□ -1.63
HAP4	YKL109W	DUG1	P43616	481 aa	Known RBP	4.88	□□□□□ -1.63
HAP4	YKL109W	UBC9	P50623	157 aa	Predicted RBP	4.88	□□□□□ -1.63
HAP4	YKL109W	HDA1	P53973	706 aa		4.88	□□□□□ -1.63
HAP4	YKL109W	RIB2	Q12362	591 aa	Known RBP	4.88	□□□□□ -1.63
HAP4	YKL109W	MPD2	Q99316	277 aa		4.88	□□□□□ -1.63
HAP4	YKL109W	NOT3	P06102	836 aa	Known RBP	4.87	□□□□□ -1.63
HAP4	YKL109W	YCK2	P23292	546 aa	Known RBP	4.87	□□□□□ -1.63
HAP4	YKL109W	AIM26	P32858	118 aa		4.87	□□□□□ -1.63
HAP4	YKL109W	RPN10	P38886	268 aa	Known RBP	4.87	□□□□□ -1.63
HAP4	YKL109W	SLN1	P39928	1220 aa	Predicted RBP	4.87	□□□□□ -1.63
HAP4	YKL109W	PEA2	P40091	420 aa		4.87	□□□□□ -1.63
HAP4	YKL109W	NIT2	P47016	307 aa		4.87	□□□□□ -1.63
HAP4	YKL109W	TRE1	Q08919	783 aa		4.87	□□□□□ -1.63
HAP4	YKL109W	ATP4	P05626	244 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	DAL3	P32459	195 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	HIR1	P32479	840 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	RFC5	P38251	354 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	DOT6	P40059	670 aa	Known RBP	4.86	□□□□□ -1.63
HAP4	YKL109W	GPP2	P40106	250 aa	Known RBP	4.86	□□□□□ -1.63
HAP4	YKL109W	CEP3	P40969	608 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	MNN11	P46985	422 aa	Known RBP	4.86	□□□□□ -1.63
HAP4	YKL109W	DAS1	P47005	663 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
HAP4	YKL109W	AEP2	P22136	580 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	CYS3	P31373	394 aa	Known RBP	4.86	□□□□□ -1.63
HAP4	YKL109W	PGM1	P33401	570 aa	Known RBP	4.86	□□□□□ -1.63
HAP4	YKL109W	STE13	P33894	931 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	HSL7	P38274	827 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	SAF1	P38352	637 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	CCT5	P40413	562 aa	Known RBP	4.86	□□□□□ -1.63
HAP4	YKL109W	YGR153W	P48238	217 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	NSG2	P53898	299 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	ECM9	Q02202	377 aa		4.86	□□□□□ -1.63
HAP4	YKL109W	DIF1	O13577	133 aa		4.85	□□□□□ -1.63
HAP4	YKL109W	SST2	P11972	698 aa	Known RBP	4.85	□□□□□ -1.63
HAP4	YKL109W	VPS24	P36095	224 aa	Known RBP	4.85	□□□□□ -1.63
HAP4	YKL109W	FUI1	P38196	639 aa		4.85	□□□□□ -1.63
HAP4	YKL109W	PTC7	P38797	343 aa		4.85	□□□□□ -1.63
HAP4	YKL109W	GTS1	P40956	396 aa		4.85	□□□□□ -1.63
HAP4	YKL109W	RET2	P43621	546 aa		4.85	□□□□□ -1.63
HAP4	YKL109W	RAI1	P53063	387 aa	Known RBP	4.85	□□□□□ -1.63
HAP4	YKL109W	SUB1	P54000	292 aa	Known RBP	4.85	□□□□□ -1.63
HAP4	YKL109W	YKR011C	Q02209	353 aa		4.85	□□□□□ -1.63
HAP4	YKL109W	RPS9A	O13516	197 aa	Known RBP	4.84	□□□□□ -1.63
HAP4	YKL109W	PIF1	P07271	859 aa		4.84	□□□□□ -1.63
HAP4	YKL109W	SPS1	P08458	490 aa		4.84	□□□□□ -1.63
HAP4	YKL109W	PWP2	P25635	923 aa	Known RBP	4.84	□□□□□ -1.63
HAP4	YKL109W	RPD3	P32561	433 aa		4.84	□□□□□ -1.63
HAP4	YKL109W	SRP101	P32916	621 aa		4.84	□□□□□ -1.63
HAP4	YKL109W	YKR051W	P36142	418 aa		4.84	□□□□□ -1.63
HAP4	YKL109W	SET5	P38890	526 aa	Known RBP	4.84	□□□□□ -1.63
HAP4	YKL109W	MSC2	Q03455	724 aa		4.84	□□□□□ -1.63
HAP4	YKL109W	THI21	Q08975	551 aa		4.84	□□□□□ -1.63
HAP4	YKL109W	YOR022C	Q12204	715 aa		4.84	□□□□□ -1.63
HAP4	YKL109W	NYV1	Q12255	253 aa		4.84	□□□□□ -1.63
HAP4	YKL109W	APL1	P27351	700 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	TYE7	P33122	291 aa	Predicted RBP	4.83	□□□□□ -1.64
HAP4	YKL109W	SAP190	P36123	1033 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	TDA3	P38758	523 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	SHR5	P41912	237 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	SIZ1	Q04195	904 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	CDA1	Q06702	301 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	BUD21	Q08492	214 aa	Predicted RBP	4.83	□□□□□ -1.64
HAP4	YKL109W	HAL9	Q12180	1030 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	Q0142	Q9ZZW4	58 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	PRC1	P00729	532 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	YEF3	P16521	1044 aa	Known RBP	4.83	□□□□□ -1.64
HAP4	YKL109W	MSB1	P21339	1137 aa	Known RBP	4.83	□□□□□ -1.64
HAP4	YKL109W	HSP78	P33416	811 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	DID4	P36108	232 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	HXT6	P39003	570 aa	Known RBP	4.83	□□□□□ -1.64
HAP4	YKL109W	HXT7	P39004	570 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	NPY1	P53164	384 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	MET14	Q02196	202 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	YMR187C	Q03236	431 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	SSY1	Q03770	852 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	SSL1	Q04673	461 aa	Predicted RBP	4.83	□□□□□ -1.64
HAP4	YKL109W	CRR1	Q05790	422 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	RMP1	Q12530	201 aa		4.83	□□□□□ -1.64
HAP4	YKL109W	RPS21A	P0C0V8	87 aa	Known RBP	4.82	□□□□□ -1.64
HAP4	YKL109W	KAR1	P11927	433 aa		4.82	□□□□□ -1.64
HAP4	YKL109W	ENA1	P13587	1091 aa		4.82	□□□□□ -1.64
HAP4	YKL109W	TAT1	P38085	619 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms