RNA–Protein interactions for RNA: YDR297W

SUR2, Transcript of Sphinganine C4-hydroxylase, yeast

Gene SUR2, Length 1,050 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUR2	YDR297W	INH1	P01097	85 aa		5.2	□□□□□ -1.58
SUR2	YDR297W	SMY1	P32364	656 aa	Known RBP	5.2	□□□□□ -1.58
SUR2	YDR297W	DUT1	P33317	147 aa		5.2	□□□□□ -1.58
SUR2	YDR297W	APL2	P36000	726 aa	Predicted RBP	5.2	□□□□□ -1.58
SUR2	YDR297W	RRN3	P36070	627 aa		5.2	□□□□□ -1.58
SUR2	YDR297W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
SUR2	YDR297W	PAC1	P39946	494 aa	Known RBP	5.2	□□□□□ -1.58
SUR2	YDR297W	MXR1	P40029	184 aa		5.2	□□□□□ -1.58
SUR2	YDR297W	RPN11	P43588	306 aa	Known RBP	5.2	□□□□□ -1.58
SUR2	YDR297W	YJL181W	P46987	611 aa		5.2	□□□□□ -1.58
SUR2	YDR297W	YNL193W	P53870	558 aa		5.2	□□□□□ -1.58
SUR2	YDR297W	ALO1	P54783	526 aa	Known RBP	5.2	□□□□□ -1.58
SUR2	YDR297W	ULP1	Q02724	621 aa		5.2	□□□□□ -1.58
SUR2	YDR297W	ERV41	Q04651	352 aa		5.2	□□□□□ -1.58
SUR2	YDR297W	GIC2	Q06648	383 aa		5.2	□□□□□ -1.58
SUR2	YDR297W	THI73	Q07904	523 aa		5.2	□□□□□ -1.58
SUR2	YDR297W	APC2	Q12440	853 aa		5.2	□□□□□ -1.58
SUR2	YDR297W	BRR1	Q99177	341 aa	Predicted RBP	5.2	□□□□□ -1.58
SUR2	YDR297W	GCR1	P07261	785 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	LPD1	P09624	499 aa	Known RBP	5.19	□□□□□ -1.58
SUR2	YDR297W	CDC16	P09798	840 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	ERR1	P0CX10	437 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	ERR2	P0CX11	437 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	PGI1	P12709	554 aa	Known RBP	5.19	□□□□□ -1.58
SUR2	YDR297W	THR4	P16120	514 aa	Known RBP	5.19	□□□□□ -1.58
SUR2	YDR297W	GFD2	P25370	566 aa	Known RBP	5.19	□□□□□ -1.58
SUR2	YDR297W	VMA3	P25515	160 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	AAD3	P25612	363 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
SUR2	YDR297W	ATG19	P35193	415 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	RXT2	P38255	430 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	OPY1	P38271	328 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	RFC1	P38630	861 aa	Known RBP	5.19	□□□□□ -1.58
SUR2	YDR297W	SIC1	P38634	284 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	SHU2	P38957	223 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	CAJ1	P39101	391 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	DOT6	P40059	670 aa	Known RBP	5.19	□□□□□ -1.58
SUR2	YDR297W	PSY2	P40164	858 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	RRD1	P40454	393 aa	Known RBP	5.19	□□□□□ -1.58
SUR2	YDR297W	YGR016W	P53209	190 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	JJJ1	P53863	590 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	CWC21	Q03375	135 aa	Known RBP	5.19	□□□□□ -1.58
SUR2	YDR297W	SND1	Q04007	877 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	YMR074C	Q04773	145 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	TSR2	Q06672	205 aa	Known RBP	5.19	□□□□□ -1.58
SUR2	YDR297W	MRL1	Q06815	381 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	RRP6	Q12149	733 aa	Known RBP	5.19	□□□□□ -1.58
SUR2	YDR297W	SRF1	Q12516	437 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	NCB2	Q92317	146 aa		5.19	□□□□□ -1.58
SUR2	YDR297W	SWI6	P09959	803 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	SST2	P11972	698 aa	Known RBP	5.18	□□□□□ -1.58
SUR2	YDR297W	PET123	P17558	318 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	CLC1	P17891	233 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	RPB4	P20433	221 aa	Predicted RBP	5.18	□□□□□ -1.58
SUR2	YDR297W	LYP1	P32487	611 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	FBP26	P32604	452 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	YKL100C	P34248	587 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	YKL069W	P36088	180 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	YBR071W	P38243	211 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	OTU2	P38747	307 aa	Known RBP	5.18	□□□□□ -1.58
SUR2	YDR297W	MEF2	P39677	819 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	ARB1	P40024	610 aa	Known RBP	5.18	□□□□□ -1.58
SUR2	YDR297W	VID27	P40157	782 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	UTP18	P40362	594 aa	Predicted RBP	5.18	□□□□□ -1.58
SUR2	YDR297W	PEX14	P53112	341 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	HOP2	P53187	214 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	SDA1	P53313	767 aa	Known RBP	5.18	□□□□□ -1.58
SUR2	YDR297W	RNH1	Q04740	348 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	YLR352W	Q06479	807 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	PMT7	Q06644	662 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	VIP1	Q06685	1146 aa	Known RBP	5.18	□□□□□ -1.58
SUR2	YDR297W	ISA1	Q07821	250 aa	Predicted RBP	5.18	□□□□□ -1.58
SUR2	YDR297W	YPL191C	Q08930	360 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	RKM4	Q12504	494 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	PDR18	P53756	1333 aa		5.18	□□□□□ -1.58
SUR2	YDR297W	DUR1,2	P32528	1835 aa	Known RBP	5.18	□□□□□ -1.58
SUR2	YDR297W	TUF1	P02992	437 aa	Known RBP	5.17	□□□□□ -1.58
SUR2	YDR297W	HOM3	P10869	527 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	MER1	P16523	270 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	MRPL25	P23369	157 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	PTP2	P29461	750 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	MCM5	P29496	775 aa	Known RBP	5.17	□□□□□ -1.58
SUR2	YDR297W	VPH1	P32563	840 aa	Known RBP	5.17	□□□□□ -1.58
SUR2	YDR297W	STO1	P34160	861 aa	Known RBP	5.17	□□□□□ -1.58
SUR2	YDR297W	VBA5	P36172	582 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	YAP1801	P38856	637 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	NPR2	P39923	615 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	IES5	P40060	125 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	RSM26	P47141	266 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	YGL082W	P53155	381 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	BTN2	P53286	410 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	DBP9	Q06218	594 aa	Known RBP	5.17	□□□□□ -1.58
SUR2	YDR297W	ESC2	Q06340	456 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	ARR1	Q06596	294 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	HMI1	Q12039	706 aa		5.17	□□□□□ -1.58
SUR2	YDR297W	CMR1	Q12510	522 aa	Known RBP	5.17	□□□□□ -1.58
SUR2	YDR297W	SSK22	P25390	1331 aa	Predicted RBP	5.17	□□□□□ -1.58
SUR2	YDR297W	MOD5	P07884	428 aa		5.16	□□□□□ -1.58
SUR2	YDR297W	HMG1	P12683	1054 aa		5.16	□□□□□ -1.58
SUR2	YDR297W	PCT1	P13259	424 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms