RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C ENA5Q12691 1091 aa6.69□□□□□ -1.34
RTN1YDR233C NOG2P53742 486 aaKnown RBP6.68□□□□□ -1.34
RTN1YDR233C SNO2P53823 222 aa6.68□□□□□ -1.34
RTN1YDR233C ROT1Q03691 256 aa6.68□□□□□ -1.34
RTN1YDR233C YDR514CQ04408 483 aa6.68□□□□□ -1.34
RTN1YDR233C SSL1Q04673 461 aaPredicted RBP6.68□□□□□ -1.34
RTN1YDR233C REH1Q06709 432 aa6.68□□□□□ -1.34
RTN1YDR233C SPE1P08432 466 aa6.67□□□□□ -1.34
RTN1YDR233C SFP1P32432 683 aa6.67□□□□□ -1.34
RTN1YDR233C STO1P34160 861 aaKnown RBP6.67□□□□□ -1.34
RTN1YDR233C CRP1P38845 465 aaKnown RBP6.67□□□□□ -1.34
RTN1YDR233C UBP12P39538 1254 aa6.67□□□□□ -1.34
RTN1YDR233C CEP3P40969 608 aa6.67□□□□□ -1.34
RTN1YDR233C CAF16P43569 289 aa6.67□□□□□ -1.34
RTN1YDR233C YNR029CP53729 429 aaKnown RBP6.67□□□□□ -1.34
RTN1YDR233C YKR011CQ02209 353 aa6.67□□□□□ -1.34
RTN1YDR233C SGD1Q06132 899 aa6.67□□□□□ -1.34
RTN1YDR233C ADY3Q07732 790 aa6.67□□□□□ -1.34
RTN1YDR233C CDC6P09119 513 aa6.66□□□□□ -1.34
RTN1YDR233C RAD18P10862 487 aa6.66□□□□□ -1.34
RTN1YDR233C PCL2P25693 308 aa6.66□□□□□ -1.34
RTN1YDR233C LAM1P38851 1228 aa6.66□□□□□ -1.34
RTN1YDR233C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
RTN1YDR233C MRPL22P53881 309 aa6.66□□□□□ -1.34
RTN1YDR233C TPO1Q07824 586 aa6.66□□□□□ -1.34
RTN1YDR233C YBR182C-AQ8TGU6 64 aa6.66□□□□□ -1.34
RTN1YDR233C FBP1P09201 348 aa6.65□□□□□ -1.34
RTN1YDR233C CYS3P31373 394 aaKnown RBP6.65□□□□□ -1.34
RTN1YDR233C GRX4P32642 244 aa6.65□□□□□ -1.34
RTN1YDR233C TSA1P34760 196 aaKnown RBP6.65□□□□□ -1.34
RTN1YDR233C MAC1P35192 417 aa6.65□□□□□ -1.34
RTN1YDR233C GCV2P49095 1034 aa6.65□□□□□ -1.34
RTN1YDR233C YDR132CQ03900 495 aa6.65□□□□□ -1.34
RTN1YDR233C DUS4Q06063 367 aa6.65□□□□□ -1.34
RTN1YDR233C WHI4Q07655 649 aaKnown RBP6.65□□□□□ -1.34
RTN1YDR233C RPS9AO13516 197 aaKnown RBP6.64□□□□□ -1.35
RTN1YDR233C MIH1P23748 554 aa6.64□□□□□ -1.35
RTN1YDR233C TSR4P25040 408 aa6.64□□□□□ -1.35
RTN1YDR233C TYE7P33122 291 aaPredicted RBP6.64□□□□□ -1.35
RTN1YDR233C MGS1P40151 587 aa6.64□□□□□ -1.35
RTN1YDR233C ECL1P48235 211 aa6.64□□□□□ -1.35
RTN1YDR233C YGL081WP53156 320 aa6.64□□□□□ -1.35
RTN1YDR233C GTF1P53260 183 aaPredicted RBP6.64□□□□□ -1.35
RTN1YDR233C YDR338CQ05497 695 aa6.64□□□□□ -1.35
RTN1YDR233C SEG2P34250 1132 aa6.63□□□□□ -1.35
RTN1YDR233C POA1P38218 177 aa6.63□□□□□ -1.35
RTN1YDR233C MEF2P39677 819 aa6.63□□□□□ -1.35
RTN1YDR233C YIL108WP40483 696 aaKnown RBP6.63□□□□□ -1.35
RTN1YDR233C PSP2P50109 593 aaKnown RBP6.63□□□□□ -1.35
RTN1YDR233C SNP1Q00916 300 aaPredicted RBP6.63□□□□□ -1.35
RTN1YDR233C VPS30Q02948 557 aa6.63□□□□□ -1.35
RTN1YDR233C HMI1Q12039 706 aa6.63□□□□□ -1.35
RTN1YDR233C HAL9Q12180 1030 aa6.63□□□□□ -1.35
RTN1YDR233C YOR022CQ12204 715 aa6.63□□□□□ -1.35
RTN1YDR233C YEL1P34225 687 aa6.62□□□□□ -1.35
RTN1YDR233C RLP7P40693 322 aaKnown RBP6.62□□□□□ -1.35
RTN1YDR233C MET12P46151 657 aa6.62□□□□□ -1.35
RTN1YDR233C ALY2P47029 1046 aa6.62□□□□□ -1.35
RTN1YDR233C HLJ1P48353 224 aa6.62□□□□□ -1.35
RTN1YDR233C MET13P53128 600 aa6.62□□□□□ -1.35
RTN1YDR233C VPS62P53285 467 aa6.62□□□□□ -1.35
RTN1YDR233C GCN5Q03330 439 aa6.62□□□□□ -1.35
RTN1YDR233C RGA2Q06407 1009 aa6.62□□□□□ -1.35
RTN1YDR233C SFL1P20134 766 aa6.61□□□□□ -1.35
RTN1YDR233C HOG1P32485 435 aa6.61□□□□□ -1.35
RTN1YDR233C URM1P40554 99 aaPredicted RBP6.61□□□□□ -1.35
RTN1YDR233C SDA1P53313 767 aaKnown RBP6.61□□□□□ -1.35
RTN1YDR233C IOC4Q04213 475 aa6.61□□□□□ -1.35
RTN1YDR233C CDA2Q06703 312 aa6.61□□□□□ -1.35
RTN1YDR233C THI73Q07904 523 aa6.61□□□□□ -1.35
RTN1YDR233C THI21Q08975 551 aa6.61□□□□□ -1.35
RTN1YDR233C HMG1P12683 1054 aa6.6□□□□□ -1.35
RTN1YDR233C PCM1P38628 557 aaKnown RBP6.6□□□□□ -1.35
RTN1YDR233C SET5P38890 526 aaKnown RBP6.6□□□□□ -1.35
RTN1YDR233C YEN1P40028 759 aa6.6□□□□□ -1.35
RTN1YDR233C AIM14P53109 570 aa6.6□□□□□ -1.35
RTN1YDR233C GPG1P53130 126 aa6.6□□□□□ -1.35
RTN1YDR233C DUS1P53759 423 aaKnown RBP6.6□□□□□ -1.35
RTN1YDR233C ATG33Q06485 197 aa6.6□□□□□ -1.35
RTN1YDR233C GPB1Q08886 897 aa6.6□□□□□ -1.35
RTN1YDR233C UPC2Q12151 913 aa6.6□□□□□ -1.35
RTN1YDR233C PRC1P00729 532 aa6.59□□□□□ -1.35
RTN1YDR233C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
RTN1YDR233C EMC1P25574 760 aa6.59□□□□□ -1.35
RTN1YDR233C STE14P32584 239 aa6.59□□□□□ -1.35
RTN1YDR233C CTF8P38877 133 aa6.59□□□□□ -1.35
RTN1YDR233C PUS2P53167 370 aa6.59□□□□□ -1.35
RTN1YDR233C PBP1P53297 722 aaKnown RBP6.59□□□□□ -1.35
RTN1YDR233C YAP6Q03935 383 aa6.59□□□□□ -1.35
RTN1YDR233C YOR352WQ08816 343 aa6.59□□□□□ -1.35
RTN1YDR233C DIF1O13577 133 aa6.58□□□□□ -1.36
RTN1YDR233C HIS5P07172 385 aa6.58□□□□□ -1.36
RTN1YDR233C GAS1P22146 559 aaKnown RBP6.58□□□□□ -1.36
RTN1YDR233C ATG19P35193 415 aa6.58□□□□□ -1.36
RTN1YDR233C SDP1P40479 209 aa6.58□□□□□ -1.36
RTN1YDR233C NHX1Q04121 633 aa6.58□□□□□ -1.36
RTN1YDR233C COG8Q04632 607 aa6.58□□□□□ -1.36
RTN1YDR233C YPL277CQ08989 487 aa6.58□□□□□ -1.36
RTN1YDR233C NUP145P49687 1317 aa6.57□□□□□ -1.36
RTN1YDR233C RPS13P05756 151 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms