RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C BI4P03879 638 aa4.33□□□□□ -1.72
RRP42YDL111C GSY1P23337 708 aa4.33□□□□□ -1.72
RRP42YDL111C PMI40P29952 429 aaKnown RBP4.33□□□□□ -1.72
RRP42YDL111C SLI1P53304 468 aa4.33□□□□□ -1.72
RRP42YDL111C YNL193WP53870 558 aa4.33□□□□□ -1.72
RRP42YDL111C SRP1Q02821 542 aaKnown RBP4.33□□□□□ -1.72
RRP42YDL111C YAP6Q03935 383 aa4.33□□□□□ -1.72
RRP42YDL111C YLR224WQ05947 369 aa4.33□□□□□ -1.72
RRP42YDL111C NTO1Q12311 748 aa4.33□□□□□ -1.72
RRP42YDL111C ADE8P04161 214 aa4.32□□□□□ -1.72
RRP42YDL111C THS1P04801 734 aaKnown RBP4.32□□□□□ -1.72
RRP42YDL111C TOP3P13099 656 aa4.32□□□□□ -1.72
RRP42YDL111C EMC1P25574 760 aa4.32□□□□□ -1.72
RRP42YDL111C ENP1P38333 483 aaKnown RBP4.32□□□□□ -1.72
RRP42YDL111C TPM2P40414 161 aa4.32□□□□□ -1.72
RRP42YDL111C YGR237CP50089 785 aa4.32□□□□□ -1.72
RRP42YDL111C HFM1P51979 1187 aa4.32□□□□□ -1.72
RRP42YDL111C GTF1P53260 183 aaPredicted RBP4.32□□□□□ -1.72
RRP42YDL111C SUN4P53616 420 aa4.32□□□□□ -1.72
RRP42YDL111C DUS3Q06053 668 aaKnown RBP4.32□□□□□ -1.72
RRP42YDL111C MSD1P15179 658 aaKnown RBP4.31□□□□□ -1.72
RRP42YDL111C PPH3P32345 308 aa4.31□□□□□ -1.72
RRP42YDL111C YEL1P34225 687 aa4.31□□□□□ -1.72
RRP42YDL111C GRX7P38068 203 aa4.31□□□□□ -1.72
RRP42YDL111C YBR284WP38150 797 aa4.31□□□□□ -1.72
RRP42YDL111C ALG2P43636 503 aa4.31□□□□□ -1.72
RRP42YDL111C GCV2P49095 1034 aa4.31□□□□□ -1.72
RRP42YDL111C MTC3P53077 123 aa4.31□□□□□ -1.72
RRP42YDL111C LCD1Q04377 747 aa4.31□□□□□ -1.72
RRP42YDL111C NOP12Q08208 459 aaKnown RBP4.31□□□□□ -1.72
RRP42YDL111C YOL057WQ08225 711 aa4.31□□□□□ -1.72
RRP42YDL111C NUP145P49687 1317 aa4.3□□□□□ -1.72
RRP42YDL111C PMA1P05030 918 aaKnown RBP4.3□□□□□ -1.72
RRP42YDL111C RAD53P22216 821 aa4.3□□□□□ -1.72
RRP42YDL111C MEF1P25039 761 aa4.3□□□□□ -1.72
RRP42YDL111C DCG1P32460 244 aa4.3□□□□□ -1.72
RRP42YDL111C DSS1P39112 969 aa4.3□□□□□ -1.72
RRP42YDL111C AIM21P40563 679 aa4.3□□□□□ -1.72
RRP42YDL111C MND2P40577 368 aa4.3□□□□□ -1.72
RRP42YDL111C CTF4Q01454 927 aa4.3□□□□□ -1.72
RRP42YDL111C UME1Q03010 460 aa4.3□□□□□ -1.72
RRP42YDL111C YLR001CQ07895 862 aa4.3□□□□□ -1.72
RRP42YDL111C THI73Q07904 523 aa4.3□□□□□ -1.72
RRP42YDL111C YPR071WQ12346 211 aa4.3□□□□□ -1.72
RRP42YDL111C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
RRP42YDL111C CDC12P32468 407 aaKnown RBP4.29□□□□□ -1.72
RRP42YDL111C YPT53P36019 220 aa4.29□□□□□ -1.72
RRP42YDL111C PHO23P50947 330 aa4.29□□□□□ -1.72
RRP42YDL111C SDA1P53313 767 aaKnown RBP4.29□□□□□ -1.72
RRP42YDL111C FOL1P53848 824 aa4.29□□□□□ -1.72
RRP42YDL111C BUL2Q03758 920 aaKnown RBP4.29□□□□□ -1.72
RRP42YDL111C ADY3Q07732 790 aa4.29□□□□□ -1.72
RRP42YDL111C TPO1Q07824 586 aa4.29□□□□□ -1.72
RRP42YDL111C YLL058WQ12198 575 aa4.29□□□□□ -1.72
RRP42YDL111C VBA3P25594 458 aa4.28□□□□□ -1.72
RRP42YDL111C SPC29P33419 253 aa4.28□□□□□ -1.72
RRP42YDL111C YRO2P38079 344 aa4.28□□□□□ -1.72
RRP42YDL111C CHS7P38843 316 aa4.28□□□□□ -1.72
RRP42YDL111C MGS1P40151 587 aa4.28□□□□□ -1.72
RRP42YDL111C MET12P46151 657 aa4.28□□□□□ -1.72
RRP42YDL111C CCM1P48237 864 aaPredicted RBP4.28□□□□□ -1.72
RRP42YDL111C SUB1P54000 292 aaKnown RBP4.28□□□□□ -1.72
RRP42YDL111C COG8Q04632 607 aa4.28□□□□□ -1.72
RRP42YDL111C XYL2Q07993 356 aa4.28□□□□□ -1.72
RRP42YDL111C TMA17Q12513 150 aa4.28□□□□□ -1.72
RRP42YDL111C PHR1P05066 565 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
RRP42YDL111C REC104P33323 182 aa4.27□□□□□ -1.73
RRP42YDL111C YKR078WP36158 585 aaKnown RBP4.27□□□□□ -1.73
RRP42YDL111C PLB1P39105 664 aa4.27□□□□□ -1.73
RRP42YDL111C ZRG8P40021 1076 aa4.27□□□□□ -1.73
RRP42YDL111C TOK1P40310 691 aa4.27□□□□□ -1.73
RRP42YDL111C CHA4P43634 648 aa4.27□□□□□ -1.73
RRP42YDL111C FAP7Q12055 197 aaPredicted RBP4.27□□□□□ -1.73
RRP42YDL111C CDC9P04819 755 aa4.26□□□□□ -1.73
RRP42YDL111C HIS5P07172 385 aa4.26□□□□□ -1.73
RRP42YDL111C SRD1P09007 221 aa4.26□□□□□ -1.73
RRP42YDL111C AFR1P33304 620 aa4.26□□□□□ -1.73
RRP42YDL111C MTC2P34246 357 aa4.26□□□□□ -1.73
RRP42YDL111C DEF1P35732 738 aaKnown RBP4.26□□□□□ -1.73
RRP42YDL111C YKL151CP36059 337 aa4.26□□□□□ -1.73
RRP42YDL111C POA1P38218 177 aa4.26□□□□□ -1.73
RRP42YDL111C SAH1P39954 449 aaKnown RBP4.26□□□□□ -1.73
RRP42YDL111C GPG1P53130 126 aa4.26□□□□□ -1.73
RRP42YDL111C PEX8P53248 589 aa4.26□□□□□ -1.73
RRP42YDL111C DAM1P53267 343 aa4.26□□□□□ -1.73
RRP42YDL111C ATP25Q03153 612 aa4.26□□□□□ -1.73
RRP42YDL111C HFD1Q04458 532 aa4.26□□□□□ -1.73
RRP42YDL111C PCL2P25693 308 aa4.25□□□□□ -1.73
RRP42YDL111C EMC3P36039 253 aa4.25□□□□□ -1.73
RRP42YDL111C TYS1P36421 394 aaKnown RBP4.25□□□□□ -1.73
RRP42YDL111C YAP1801P38856 637 aa4.25□□□□□ -1.73
RRP42YDL111C CAF16P43569 289 aa4.25□□□□□ -1.73
RRP42YDL111C YGR283CP53336 341 aaPredicted RBP4.25□□□□□ -1.73
RRP42YDL111C HRQ1Q05549 1077 aa4.25□□□□□ -1.73
RRP42YDL111C OSW2Q12202 724 aa4.25□□□□□ -1.73
RRP42YDL111C TMA7Q3E764 64 aaKnown RBP4.25□□□□□ -1.73
RRP42YDL111C NPP1P25353 742 aa4.24□□□□□ -1.73
RRP42YDL111C SEC6P32844 805 aa4.24□□□□□ -1.73
RRP42YDL111C STO1P34160 861 aaKnown RBP4.24□□□□□ -1.73
RRP42YDL111C YBR238CP38330 731 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms