RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	YLL058W	Q12198	575 aa		5.97	□□□□□ -1.45
ECM1	YAL059W	OSH2	Q12451	1283 aa		5.97	□□□□□ -1.45
ECM1	YAL059W	INH1	P01097	85 aa		5.96	□□□□□ -1.46
ECM1	YAL059W	RNQ1	P25367	405 aa		5.96	□□□□□ -1.46
ECM1	YAL059W	RPL8B	P29453	256 aa	Known RBP	5.96	□□□□□ -1.46
ECM1	YAL059W	GIC1	P38785	314 aa		5.96	□□□□□ -1.46
ECM1	YAL059W	GGA2	P38817	585 aa	Known RBP	5.96	□□□□□ -1.46
ECM1	YAL059W	HOS4	P40480	1083 aa		5.96	□□□□□ -1.46
ECM1	YAL059W	XYL2	Q07993	356 aa		5.96	□□□□□ -1.46
ECM1	YAL059W	NUP145	P49687	1317 aa		5.96	□□□□□ -1.46
ECM1	YAL059W	GAL10	P04397	699 aa		5.95	□□□□□ -1.46
ECM1	YAL059W	PIF1	P07271	859 aa		5.95	□□□□□ -1.46
ECM1	YAL059W	MSH2	P25847	964 aa		5.95	□□□□□ -1.46
ECM1	YAL059W	PPH3	P32345	308 aa		5.95	□□□□□ -1.46
ECM1	YAL059W	YKL222C	P35995	705 aa		5.95	□□□□□ -1.46
ECM1	YAL059W	PMT3	P47190	753 aa		5.95	□□□□□ -1.46
ECM1	YAL059W	SPO75	Q07798	868 aa		5.95	□□□□□ -1.46
ECM1	YAL059W	PGI1	P12709	554 aa	Known RBP	5.94	□□□□□ -1.46
ECM1	YAL059W	AAR2	P32357	355 aa	Predicted RBP	5.94	□□□□□ -1.46
ECM1	YAL059W	NPP2	P39997	493 aa		5.94	□□□□□ -1.46
ECM1	YAL059W	ALR2	P43553	858 aa		5.94	□□□□□ -1.46
ECM1	YAL059W	ERP6	P53198	216 aa		5.94	□□□□□ -1.46
ECM1	YAL059W	UBX4	P54730	416 aa		5.94	□□□□□ -1.46
ECM1	YAL059W	TFB2	Q02939	513 aa		5.94	□□□□□ -1.46
ECM1	YAL059W	SRT1	Q03175	343 aa		5.94	□□□□□ -1.46
ECM1	YAL059W	SGD1	Q06132	899 aa		5.94	□□□□□ -1.46
ECM1	YAL059W	PSK2	Q08217	1101 aa		5.94	□□□□□ -1.46
ECM1	YAL059W	YOR352W	Q08816	343 aa		5.94	□□□□□ -1.46
ECM1	YAL059W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.94	□□□□□ -1.46	not detected
ECM1	YAL059W	MPH2	P0CD99	609 aa		5.93	□□□□□ -1.46
ECM1	YAL059W	DAL5	P15365	543 aa		5.93	□□□□□ -1.46
ECM1	YAL059W	SWI3	P32591	825 aa		5.93	□□□□□ -1.46
ECM1	YAL059W	HBS1	P32769	611 aa	Known RBP	5.93	□□□□□ -1.46
ECM1	YAL059W	MRS6	P32864	603 aa	Known RBP	5.93	□□□□□ -1.46
ECM1	YAL059W	AIM3	P38266	947 aa	Known RBP	5.93	□□□□□ -1.46
ECM1	YAL059W	MSC2	Q03455	724 aa		5.93	□□□□□ -1.46
ECM1	YAL059W	ROT1	Q03691	256 aa		5.93	□□□□□ -1.46
ECM1	YAL059W	EAF1	Q06337	982 aa		5.93	□□□□□ -1.46
ECM1	YAL059W	RLP24	Q07915	199 aa	Known RBP	5.93	□□□□□ -1.46
ECM1	YAL059W	OSW2	Q12202	724 aa		5.93	□□□□□ -1.46
ECM1	YAL059W	FOB1	O13329	566 aa		5.92	□□□□□ -1.46
ECM1	YAL059W	CAN1	P04817	590 aa		5.92	□□□□□ -1.46
ECM1	YAL059W	HSP60	P19882	572 aa	Known RBP	5.92	□□□□□ -1.46
ECM1	YAL059W	FUN30	P31380	1131 aa		5.92	□□□□□ -1.46
ECM1	YAL059W	SSH4	P32343	579 aa		5.92	□□□□□ -1.46
ECM1	YAL059W	CCC2	P38995	1004 aa		5.92	□□□□□ -1.46
ECM1	YAL059W	GPP1	P41277	250 aa	Known RBP	5.92	□□□□□ -1.46
ECM1	YAL059W	UTP8	P53276	713 aa	Known RBP	5.92	□□□□□ -1.46
ECM1	YAL059W	RRI2	Q12348	645 aa		5.92	□□□□□ -1.46
ECM1	YAL059W	SST2	P11972	698 aa	Known RBP	5.91	□□□□□ -1.46
ECM1	YAL059W	NPP1	P25353	742 aa		5.91	□□□□□ -1.46
ECM1	YAL059W	GFD2	P25370	566 aa	Known RBP	5.91	□□□□□ -1.46
ECM1	YAL059W	ARE1	P25628	610 aa		5.91	□□□□□ -1.46
ECM1	YAL059W	AFR1	P33304	620 aa		5.91	□□□□□ -1.46
ECM1	YAL059W	LAM1	P38851	1228 aa		5.91	□□□□□ -1.46
ECM1	YAL059W	SIT1	P39980	628 aa		5.91	□□□□□ -1.46
ECM1	YAL059W	PEA2	P40091	420 aa		5.91	□□□□□ -1.46
ECM1	YAL059W	YER158C	P40095	573 aa		5.91	□□□□□ -1.46
ECM1	YAL059W	SPC105	P53148	917 aa		5.91	□□□□□ -1.46
ECM1	YAL059W	PLB2	Q03674	706 aa		5.91	□□□□□ -1.46
ECM1	YAL059W	YDR132C	Q03900	495 aa		5.91	□□□□□ -1.46
ECM1	YAL059W	MPD2	Q99316	277 aa		5.91	□□□□□ -1.46
ECM1	YAL059W	PTH2	P34222	208 aa		5.9	□□□□□ -1.46
ECM1	YAL059W	YRO2	P38079	344 aa		5.9	□□□□□ -1.46
ECM1	YAL059W	ERT1	P38140	529 aa		5.9	□□□□□ -1.46
ECM1	YAL059W	SFB2	P53953	876 aa		5.9	□□□□□ -1.46
ECM1	YAL059W	RPS13	P05756	151 aa	Known RBP	5.89	□□□□□ -1.47
ECM1	YAL059W	HSC82	P15108	705 aa	Known RBP	5.89	□□□□□ -1.47
ECM1	YAL059W	YBR284W	P38150	797 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	MUM2	P38236	366 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	TSL1	P38427	1098 aa	Known RBP	5.89	□□□□□ -1.47
ECM1	YAL059W	MEF2	P39677	819 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	IRC24	P40580	263 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	HUL4	P40985	892 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	GYP7	P48365	746 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	PEX14	P53112	341 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	RIM8	P53179	542 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	UME1	Q03010	460 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	UGO1	Q03327	502 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	GCN5	Q03330	439 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	THI73	Q07904	523 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	YPL277C	Q08989	487 aa		5.89	□□□□□ -1.47
ECM1	YAL059W	FAP7	Q12055	197 aa	Predicted RBP	5.89	□□□□□ -1.47
ECM1	YAL059W	SOD2	P00447	233 aa		5.88	□□□□□ -1.47
ECM1	YAL059W	ADE8	P04161	214 aa		5.88	□□□□□ -1.47
ECM1	YAL059W	PRP6	P19735	899 aa	Predicted RBP	5.88	□□□□□ -1.47
ECM1	YAL059W	SRP101	P32916	621 aa		5.88	□□□□□ -1.47
ECM1	YAL059W	PEX6	P33760	1030 aa		5.88	□□□□□ -1.47
ECM1	YAL059W	YKR078W	P36158	585 aa	Known RBP	5.88	□□□□□ -1.47
ECM1	YAL059W	TRZ1	P36159	838 aa	Predicted RBP	5.88	□□□□□ -1.47
ECM1	YAL059W	ECM21	P38167	1117 aa	Known RBP	5.88	□□□□□ -1.47
ECM1	YAL059W	ZRG8	P40021	1076 aa		5.88	□□□□□ -1.47
ECM1	YAL059W	MND2	P40577	368 aa		5.88	□□□□□ -1.47
ECM1	YAL059W	PIP2	P52960	996 aa		5.88	□□□□□ -1.47
ECM1	YAL059W	GTF1	P53260	183 aa	Predicted RBP	5.88	□□□□□ -1.47
ECM1	YAL059W	COG6	P53959	839 aa		5.88	□□□□□ -1.47
ECM1	YAL059W	TGL2	P54857	326 aa		5.88	□□□□□ -1.47
ECM1	YAL059W	RTP1	Q12751	981 aa		5.88	□□□□□ -1.47
ECM1	YAL059W	ENA1	P13587	1091 aa		5.87	□□□□□ -1.47
ECM1	YAL059W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	RIP-Chip

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms