RNA–Protein interactions for RNA: ENST00000642089.1

SAMMSON-226, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-226ENST00000642089 RRP7AQ9Y3A4 280 aaKnown RBP6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 UBR3Q6ZT12 1888 aa6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 MAPK8IP3Q9UPT6 1336 aa6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 TJP1Q07157 1748 aa6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 QSER1Q2KHR3 1735 aa6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 KCNQ3O43525 872 aa6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 WDR43Q15061 677 aaKnown RBP eCLIP6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 ZBED2Q9BTP6 218 aa6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 PRKRIP1Q9H875 184 aaPredicted RBP6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 WWC3Q9ULE0 1092 aa6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 RTCBQ9Y3I0 505 aaKnown RBP6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 ZNF330Q9Y3S2 320 aaPredicted RBP6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 COL5A3P25940 1745 aaPredicted RBP6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 MRC1P22897 1456 aa6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 ADAMTS7Q9UKP4 1686 aa6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 BTBD11A6QL63 1104 aa6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 TBC1D12O60347 775 aa6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 PTPREP23469 700 aa6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 CANXP27824 592 aaKnown RBP6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 TRAPPC3LQ5T215 181 aa6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 FLAD1Q8NFF5 587 aa6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 SLC16A10Q8TF71 515 aa6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 ZNF496Q96IT1 587 aaPredicted RBP6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 BCL2L12Q9HB09 334 aa6.48□□□□□ -1.37
SAMMSON-226ENST00000642089 KCPQ6ZWJ8 1503 aa6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 PRAMEF22A3QJZ6 481 aa6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 GTPBP6O43824 516 aaPredicted RBP6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 SSFA2P28290 1259 aa6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 RFC4P35249 363 aa6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 PIP4K2AP48426 406 aaPredicted RBP6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 CCDC184Q52MB2 194 aa6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 ZNF790Q6PG37 636 aa6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 NLGN2Q8NFZ4 835 aa6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 ARHGEF1Q92888 912 aaKnown RBP6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 MS4A4AQ96JQ5 239 aa6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 PLEKHF1Q96S99 279 aa6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 SYT17Q9BSW7 474 aa6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 CCDC87Q9NVE4 849 aa6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 SRP68Q9UHB9 627 aaKnown RBP6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 DLG5Q8TDM6 1919 aa6.47□□□□□ -1.37
SAMMSON-226ENST00000642089 MYH14Q7Z406 1995 aaKnown RBP6.46□□□□□ -1.37
SAMMSON-226ENST00000642089 CEMIPQ8WUJ3 1361 aa6.46□□□□□ -1.37
SAMMSON-226ENST00000642089 SIPA1L3O60292 1781 aaPredicted RBP6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 RPS6KA4O75676 772 aa6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 CYP19A1P11511 503 aaPredicted RBP6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 BCAMP50895 628 aa6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 RIPK4P57078 832 aa6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 NFE2L2Q16236 605 aa6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 PPP1R18Q6NYC8 613 aa6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 INTS5Q6P9B9 1019 aaKnown RBP6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 KRTAP1-3Q8IUG1 177 aa6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 TMC2Q8TDI7 906 aa6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 PTCD2Q8WV60 388 aaKnown RBP6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 PSMG3-AS1Q96PY0 264 aa6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 ADAMTS8Q9UP79 889 aa6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 ZBTB1Q9Y2K1 713 aa6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 CNTNAP4Q9C0A0 1308 aa6.46□□□□□ -1.38
SAMMSON-226ENST00000642089 UBR2Q8IWV8 1755 aa6.45□□□□□ -1.38
SAMMSON-226ENST00000642089 MMP10P09238 476 aa6.45□□□□□ -1.38
SAMMSON-226ENST00000642089 HMGB2P26583 209 aaKnown RBP6.45□□□□□ -1.38
SAMMSON-226ENST00000642089 RC3H1Q5TC82 1133 aaKnown RBP6.45□□□□□ -1.38
SAMMSON-226ENST00000642089 FMNL2Q96PY5 1086 aa6.45□□□□□ -1.38
SAMMSON-226ENST00000642089 ARID3AQ99856 593 aa6.45□□□□□ -1.38
SAMMSON-226ENST00000642089 PNNQ9H307 717 aaKnown RBP6.45□□□□□ -1.38
SAMMSON-226ENST00000642089 WBP1LQ9NX94 342 aa6.45□□□□□ -1.38
SAMMSON-226ENST00000642089 LAS1LQ9Y4W2 734 aaKnown RBP6.45□□□□□ -1.38
SAMMSON-226ENST00000642089 ZNF831Q5JPB2 1677 aa6.45□□□□□ -1.38
SAMMSON-226ENST00000642089 C4AP0C0L4 1744 aa6.45□□□□□ -1.38
SAMMSON-226ENST00000642089 HEG1Q9ULI3 1381 aa6.45□□□□□ -1.38
SAMMSON-226ENST00000642089 ANP32CO43423 234 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 STARD3NLO95772 234 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 A1BGP04217 495 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 GYS1P13807 737 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 GPR162Q16538 588 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 USPL1Q5W0Q7 1092 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 BICDL1Q6ZP65 573 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 KRTAP9-2Q9BYQ4 174 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 HTATSF1O43719 755 aaKnown RBP6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 ZPR1O75312 459 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 TMPOP42166 694 aaKnown RBP6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 TAF7Q15545 349 aaPredicted RBP6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 LAPTM4BQ86VI4 370 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 NGEFQ8N5V2 710 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 ZSCAN1Q8NBB4 408 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 RUNDC1Q96C34 613 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 MRS2Q9HD23 443 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 RYDENQ9NUL5 291 aaKnown RBP6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 TBC1D2BQ9UPU7 963 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 USP16Q9Y5T5 823 aa6.44□□□□□ -1.38
SAMMSON-226ENST00000642089 COL15A1P39059 1388 aa6.43□□□□□ -1.38
SAMMSON-226ENST00000642089 COL24A1Q17RW2 1714 aa6.43□□□□□ -1.38
SAMMSON-226ENST00000642089 CICQ96RK0 1608 aaPredicted RBP6.43□□□□□ -1.38
SAMMSON-226ENST00000642089 NLGN1Q8N2Q7 840 aa6.43□□□□□ -1.38
SAMMSON-226ENST00000642089 PARP3Q9Y6F1 533 aa6.43□□□□□ -1.38
SAMMSON-226ENST00000642089 SOS1Q07889 1333 aaPredicted RBP6.43□□□□□ -1.38
SAMMSON-226ENST00000642089 USP42Q9H9J4 1324 aaKnown RBP6.43□□□□□ -1.38
SAMMSON-226ENST00000642089 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
SAMMSON-226ENST00000642089 STK25O00506 426 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms