RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 GIGYF2Q6Y7W6 1299 aaKnown RBP21.94■■□□□ 1.1
PHGDH-213ENST00000641272 SYNE4Q8N205 404 aa21.94■■□□□ 1.1
PHGDH-213ENST00000641272 LMOD3Q0VAK6 560 aa21.93■■□□□ 1.1
PHGDH-213ENST00000641272 PDIA6Q15084 440 aa21.93■■□□□ 1.1
PHGDH-213ENST00000641272 KRT24Q2M2I5 525 aa21.93■■□□□ 1.1
PHGDH-213ENST00000641272 LRP10Q7Z4F1 713 aa21.93■■□□□ 1.1
PHGDH-213ENST00000641272 ZNF34Q8IZ26 560 aa21.93■■□□□ 1.1
PHGDH-213ENST00000641272 RTKN2Q8IZC4 609 aa21.93■■□□□ 1.1
PHGDH-213ENST00000641272 RNF123Q5XPI4 1314 aa21.92■■□□□ 1.1
PHGDH-213ENST00000641272 L3MBTL3Q96JM7 780 aaPredicted RBP21.92■■□□□ 1.1
PHGDH-213ENST00000641272 ADAMTSL1Q8N6G6 1762 aa21.92■■□□□ 1.1
PHGDH-213ENST00000641272 IQCA1LA6NCM1 817 aa21.91■■□□□ 1.1
PHGDH-213ENST00000641272 EAPPQ56P03 285 aaPredicted RBP21.91■■□□□ 1.1
PHGDH-213ENST00000641272 TAF1DQ9H5J8 278 aaPredicted RBP21.91■■□□□ 1.1
PHGDH-213ENST00000641272 LAS1LQ9Y4W2 734 aaKnown RBP21.91■■□□□ 1.1
PHGDH-213ENST00000641272 PPEF1O14829 653 aaPredicted RBP21.9■■□□□ 1.1
PHGDH-213ENST00000641272 AIMP1Q12904 312 aaKnown RBP21.9■■□□□ 1.1
PHGDH-213ENST00000641272 WDR43Q15061 677 aaKnown RBP eCLIP21.9■■□□□ 1.1
PHGDH-213ENST00000641272 ZNF428Q96B54 188 aa21.9■■□□□ 1.1
PHGDH-213ENST00000641272 LTBP1Q14766 1721 aa21.89■■□□□ 1.1
PHGDH-213ENST00000641272 PPP1R42Q7Z4L9 355 aa21.88■■□□□ 1.09
PHGDH-213ENST00000641272 XAGE3Q8WTP9 111 aa21.88■■□□□ 1.09
PHGDH-213ENST00000641272 RBM17Q96I25 401 aaKnown RBP21.88■■□□□ 1.09
PHGDH-213ENST00000641272 MKRN1Q9UHC7 482 aaKnown RBP21.88■■□□□ 1.09
PHGDH-213ENST00000641272 HSPA1AP0DMV8 641 aaKnown RBP21.87■■□□□ 1.09
PHGDH-213ENST00000641272 HSPA1BP0DMV9 641 aaKnown RBP21.87■■□□□ 1.09
PHGDH-213ENST00000641272 HOXA10P31260 410 aaPredicted RBP21.87■■□□□ 1.09
PHGDH-213ENST00000641272 PARP10Q53GL7 1025 aa21.87■■□□□ 1.09
PHGDH-213ENST00000641272 LDHDQ86WU2 507 aa21.87■■□□□ 1.09
PHGDH-213ENST00000641272 PSMD1Q99460 953 aa21.87■■□□□ 1.09
PHGDH-213ENST00000641272 HACL1Q9UJ83 578 aa21.87■■□□□ 1.09
PHGDH-213ENST00000641272 TAF1P21675 1872 aa21.86■■□□□ 1.09
PHGDH-213ENST00000641272 FZD9O00144 591 aa21.86■■□□□ 1.09
PHGDH-213ENST00000641272 EPHX2P34913 555 aa21.86■■□□□ 1.09
PHGDH-213ENST00000641272 COL13A1Q5TAT6 717 aaPredicted RBP21.86■■□□□ 1.09
PHGDH-213ENST00000641272 COPS6Q7L5N1 327 aa21.86■■□□□ 1.09
PHGDH-213ENST00000641272 UTP14AQ9BVJ6 771 aaKnown RBP21.86■■□□□ 1.09
PHGDH-213ENST00000641272 TRIM35Q9UPQ4 493 aa21.86■■□□□ 1.09
PHGDH-213ENST00000641272 GJA3Q9Y6H8 435 aa21.86■■□□□ 1.09
PHGDH-213ENST00000641272 DDX60Q8IY21 1712 aaKnown RBP21.86■■□□□ 1.09
PHGDH-213ENST00000641272 ABCC4O15439 1325 aa21.85■■□□□ 1.09
PHGDH-213ENST00000641272 JDP2Q8WYK2 163 aa21.85■■□□□ 1.09
PHGDH-213ENST00000641272 RUNDC1Q96C34 613 aa21.85■■□□□ 1.09
PHGDH-213ENST00000641272 BABAM1Q9NWV8 329 aa21.85■■□□□ 1.09
PHGDH-213ENST00000641272 CHPF2Q9P2E5 772 aa21.85■■□□□ 1.09
PHGDH-213ENST00000641272 CLEC11AQ9Y240 323 aa21.85■■□□□ 1.09
PHGDH-213ENST00000641272 CC2D2BQ6DHV5 1058 aa21.84■■□□□ 1.09
PHGDH-213ENST00000641272 LARGE2Q8N3Y3 721 aa21.84■■□□□ 1.09
PHGDH-213ENST00000641272 CRAMP1Q96RY5 1269 aa21.84■■□□□ 1.09
PHGDH-213ENST00000641272 CREBZFQ9NS37 354 aa21.84■■□□□ 1.09
PHGDH-213ENST00000641272 HCLS1P14317 486 aaPredicted RBP21.83■■□□□ 1.09
PHGDH-213ENST00000641272 NLRP3Q96P20 1036 aa21.83■■□□□ 1.09
PHGDH-213ENST00000641272 PASKQ96RG2 1323 aa21.82■■□□□ 1.08
PHGDH-213ENST00000641272 PCNTO95613 3336 aa21.82■■□□□ 1.08
PHGDH-213ENST00000641272 EIF6P56537 245 aaKnown RBP21.82■■□□□ 1.08
PHGDH-213ENST00000641272 HDGFL1Q5TGJ6 251 aa21.82■■□□□ 1.08
PHGDH-213ENST00000641272 NLRP10Q86W26 655 aa21.82■■□□□ 1.08
PHGDH-213ENST00000641272 GPC2Q8N158 579 aa21.82■■□□□ 1.08
PHGDH-213ENST00000641272 ADAMTS8Q9UP79 889 aa21.82■■□□□ 1.08
PHGDH-213ENST00000641272 CHL1O00533 1208 aa21.81■■□□□ 1.08
PHGDH-213ENST00000641272 PPIP5K2O43314 1243 aa21.81■■□□□ 1.08
PHGDH-213ENST00000641272 AOC3Q16853 763 aa21.81■■□□□ 1.08
PHGDH-213ENST00000641272 MAP1SQ66K74 1059 aaPredicted RBP21.81■■□□□ 1.08
PHGDH-213ENST00000641272 DDX21Q9NR30 783 aaKnown RBP eCLIP21.81■■□□□ 1.08
PHGDH-213ENST00000641272 HSP90AB3PQ58FF7 597 aa21.8■■□□□ 1.08
PHGDH-213ENST00000641272 NIM1KQ8IY84 436 aa21.8■■□□□ 1.08
PHGDH-213ENST00000641272 TRMT112Q9UI30 125 aaKnown RBP21.8■■□□□ 1.08
PHGDH-213ENST00000641272 COL4A1P02462 1669 aa21.79■■□□□ 1.08
PHGDH-213ENST00000641272 CNTNAP1P78357 1384 aa21.79■■□□□ 1.08
PHGDH-213ENST00000641272 LRRC37AA6NMS7 1700 aa21.79■■□□□ 1.08
PHGDH-213ENST00000641272 DUOX1Q9NRD9 1551 aa21.78■■□□□ 1.08
PHGDH-213ENST00000641272 LMOD1P29536 600 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-213ENST00000641272 TCIRG1Q13488 830 aa21.78■■□□□ 1.08
PHGDH-213ENST00000641272 ATP6V0A2Q9Y487 856 aa21.78■■□□□ 1.08
PHGDH-213ENST00000641272 SH3TC1Q8TE82 1336 aa21.78■■□□□ 1.08
PHGDH-213ENST00000641272 CAPN15O75808 1086 aa21.77■■□□□ 1.08
PHGDH-213ENST00000641272 ITGBL1O95965 494 aaPredicted RBP21.77■■□□□ 1.08
PHGDH-213ENST00000641272 SCNN1DP51172 638 aa21.77■■□□□ 1.08
PHGDH-213ENST00000641272 SLC10A5Q5PT55 438 aa21.77■■□□□ 1.08
PHGDH-213ENST00000641272 PNMA8AQ86V59 439 aaPredicted RBP21.77■■□□□ 1.08
PHGDH-213ENST00000641272 TMX4Q9H1E5 349 aaPredicted RBP21.77■■□□□ 1.08
PHGDH-213ENST00000641272 PRKRIP1Q9H875 184 aaPredicted RBP21.77■■□□□ 1.08
PHGDH-213ENST00000641272 EPS15P42566 896 aa21.76■■□□□ 1.07
PHGDH-213ENST00000641272 TNS4Q8IZW8 715 aa21.76■■□□□ 1.07
PHGDH-213ENST00000641272 MBIPQ9NS73 344 aa21.76■■□□□ 1.07
PHGDH-213ENST00000641272 TMEM88BA6NKF7 163 aa21.75■■□□□ 1.07
PHGDH-213ENST00000641272 ATP5J2-PTCD1G3V325 749 aa21.75■■□□□ 1.07
PHGDH-213ENST00000641272 GRIPAP1Q4V328 841 aa21.75■■□□□ 1.07
PHGDH-213ENST00000641272 RTL5Q5HYW3 569 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-213ENST00000641272 DUSP27Q5VZP5 1158 aa21.74■■□□□ 1.07
PHGDH-213ENST00000641272 DPP8Q6V1X1 898 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-213ENST00000641272 DDX46Q7L014 1031 aaKnown RBP21.74■■□□□ 1.07
PHGDH-213ENST00000641272 CNTROBQ8N137 903 aa21.74■■□□□ 1.07
PHGDH-213ENST00000641272 FMR1Q06787 632 aaKnown RBP eCLIP21.73■■□□□ 1.075e-7■■□□□ 13.9
PHGDH-213ENST00000641272 GRAPQ13588 217 aa21.73■■□□□ 1.07
PHGDH-213ENST00000641272 PLBD2Q8NHP8 589 aa21.73■■□□□ 1.07
PHGDH-213ENST00000641272 GRAPLQ8TC17 118 aaPredicted RBP21.73■■□□□ 1.07
PHGDH-213ENST00000641272 APAF1O14727 1248 aa21.72■■□□□ 1.07
PHGDH-213ENST00000641272 HOXB7P09629 217 aa21.72■■□□□ 1.07
PHGDH-213ENST00000641272 FAM89AQ96GI7 184 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms