RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 FAM177BA6PVY3 158 aa18.39■□□□□ 0.53
HLA-C-210ENST00000640219 CELF2O95319 508 aaKnown RBP18.39■□□□□ 0.53
HLA-C-210ENST00000640219 PIP4K2AP48426 406 aaPredicted RBP18.39■□□□□ 0.53
HLA-C-210ENST00000640219 CIAPIN1Q6FI81 312 aa18.39■□□□□ 0.53
HLA-C-210ENST00000640219 HHIPL1Q96JK4 782 aa18.39■□□□□ 0.53
HLA-C-210ENST00000640219 LARGE2Q8N3Y3 721 aa18.38■□□□□ 0.53
HLA-C-210ENST00000640219 IL17REQ8NFR9 667 aa18.38■□□□□ 0.53
HLA-C-210ENST00000640219 NIP7Q9Y221 180 aaKnown RBP eCLIP18.38■□□□□ 0.53
HLA-C-210ENST00000640219 SNED1Q8TER0 1413 aa18.38■□□□□ 0.53
HLA-C-210ENST00000640219 COL4A5P29400 1685 aa18.38■□□□□ 0.53
HLA-C-210ENST00000640219 SOX10P56693 466 aa18.37■□□□□ 0.53
HLA-C-210ENST00000640219 PRPF38BQ5VTL8 546 aaKnown RBP18.37■□□□□ 0.53
HLA-C-210ENST00000640219 CC2D2BQ6DHV5 1058 aa18.37■□□□□ 0.53
HLA-C-210ENST00000640219 GTF2E1P29083 439 aaPredicted RBP18.36■□□□□ 0.53
HLA-C-210ENST00000640219 ADARB2Q9NS39 739 aaKnown RBP18.36■□□□□ 0.53
HLA-C-210ENST00000640219 GNAT3A8MTJ3 354 aa18.35■□□□□ 0.53
HLA-C-210ENST00000640219 USP16Q9Y5T5 823 aa18.35■□□□□ 0.53
HLA-C-210ENST00000640219 KCNQ3O43525 872 aa18.34■□□□□ 0.53
HLA-C-210ENST00000640219 NIM1KQ8IY84 436 aa18.34■□□□□ 0.53
HLA-C-210ENST00000640219 GLIS2Q9BZE0 524 aaPredicted RBP18.34■□□□□ 0.53
HLA-C-210ENST00000640219 ZNF408Q9H9D4 720 aa18.34■□□□□ 0.53
HLA-C-210ENST00000640219 GPRC5DQ9NZD1 345 aa18.34■□□□□ 0.53
HLA-C-210ENST00000640219 NOGQ13253 232 aa18.33■□□□□ 0.52
HLA-C-210ENST00000640219 GRIPAP1Q4V328 841 aa18.33■□□□□ 0.52
HLA-C-210ENST00000640219 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
HLA-C-210ENST00000640219 RGL2O15211 777 aa18.32■□□□□ 0.52
HLA-C-210ENST00000640219 DIAPH1O60610 1272 aaKnown RBP18.32■□□□□ 0.52
HLA-C-210ENST00000640219 ZIC5Q96T25 663 aa18.32■□□□□ 0.52
HLA-C-210ENST00000640219 CRY2Q49AN0 593 aa18.31■□□□□ 0.52
HLA-C-210ENST00000640219 GAS2L2Q8NHY3 880 aa18.31■□□□□ 0.52
HLA-C-210ENST00000640219 SIPA1L3O60292 1781 aaPredicted RBP18.31■□□□□ 0.52
HLA-C-210ENST00000640219 COL3A1P02461 1466 aaPredicted RBP18.31■□□□□ 0.52
HLA-C-210ENST00000640219 PRAMEF22A3QJZ6 481 aa18.3■□□□□ 0.52
HLA-C-210ENST00000640219 RPGRQ92834 1020 aaKnown RBP18.3■□□□□ 0.52
HLA-C-210ENST00000640219 PGAP2Q9UHJ9 254 aa18.3■□□□□ 0.52
HLA-C-210ENST00000640219 PPIP5K2O43314 1243 aa18.29■□□□□ 0.52
HLA-C-210ENST00000640219 TCERG1O14776 1098 aaKnown RBP18.28■□□□□ 0.52
HLA-C-210ENST00000640219 SNRPA1P09661 255 aaKnown RBP18.28■□□□□ 0.52
HLA-C-210ENST00000640219 HLFQ16534 295 aa18.28■□□□□ 0.52
HLA-C-210ENST00000640219 CDC37L1Q7L3B6 337 aa18.28■□□□□ 0.52
HLA-C-210ENST00000640219 NUTM1Q86Y26 1132 aa18.28■□□□□ 0.52
HLA-C-210ENST00000640219 ZC3H15Q8WU90 426 aaKnown RBP18.28■□□□□ 0.52
HLA-C-210ENST00000640219 NYXQ9GZU5 481 aa18.28■□□□□ 0.52
HLA-C-210ENST00000640219 ABCC12Q96J65 1359 aa18.28■□□□□ 0.52
HLA-C-210ENST00000640219 NPC1L1Q9UHC9 1359 aa18.28■□□□□ 0.52
HLA-C-210ENST00000640219 NBPF26B4DH59 902 aa18.27■□□□□ 0.52
HLA-C-210ENST00000640219 HOXA10P31260 410 aaPredicted RBP18.27■□□□□ 0.52
HLA-C-210ENST00000640219 GMPSP49915 693 aaPredicted RBP18.27■□□□□ 0.52
HLA-C-210ENST00000640219 HUNKP57058 714 aa18.27■□□□□ 0.52
HLA-C-210ENST00000640219 CXCL9Q07325 125 aa18.27■□□□□ 0.52
HLA-C-210ENST00000640219 AOC3Q16853 763 aa18.27■□□□□ 0.52
HLA-C-210ENST00000640219 NBPF10Q6P3W6 841 aaKnown RBP18.27■□□□□ 0.52
HLA-C-210ENST00000640219 NBPF15Q8N660 670 aa18.27■□□□□ 0.52
HLA-C-210ENST00000640219 SAGE1Q9NXZ1 904 aa18.27■□□□□ 0.52
HLA-C-210ENST00000640219 CEMIPQ8WUJ3 1361 aa18.27■□□□□ 0.51
HLA-C-210ENST00000640219 PPEF1O14829 653 aaPredicted RBP18.26■□□□□ 0.51
HLA-C-210ENST00000640219 SLC51AQ86UW1 340 aa18.26■□□□□ 0.51
HLA-C-210ENST00000640219 HIRAP54198 1017 aaPredicted RBP18.25■□□□□ 0.51
HLA-C-210ENST00000640219 RBM17Q96I25 401 aaKnown RBP18.25■□□□□ 0.51
HLA-C-210ENST00000640219 CRAMP1Q96RY5 1269 aa18.25■□□□□ 0.51
HLA-C-210ENST00000640219 VPS33BQ9H267 617 aa18.25■□□□□ 0.51
HLA-C-210ENST00000640219 ZNRF3Q9ULT6 936 aa18.25■□□□□ 0.51
HLA-C-210ENST00000640219 U2SURPO15042 1029 aaKnown RBP18.24■□□□□ 0.51
HLA-C-210ENST00000640219 BCL2L13Q9BXK5 485 aa18.24■□□□□ 0.51
HLA-C-210ENST00000640219 TMX4Q9H1E5 349 aaPredicted RBP18.24■□□□□ 0.51
HLA-C-210ENST00000640219 FAM155AB1AL88 458 aaPredicted RBP18.23■□□□□ 0.51
HLA-C-210ENST00000640219 TRPA1O75762 1119 aa18.23■□□□□ 0.51
HLA-C-210ENST00000640219 KIF23Q02241 960 aaPredicted RBP18.23■□□□□ 0.51
HLA-C-210ENST00000640219 RGMBQ6NW40 437 aa18.23■□□□□ 0.51
HLA-C-210ENST00000640219 CTU1Q7Z7A3 348 aaKnown RBP18.23■□□□□ 0.51
HLA-C-210ENST00000640219 USP48Q86UV5 1035 aa18.23■□□□□ 0.51
HLA-C-210ENST00000640219 MIER1Q8N108 512 aa18.23■□□□□ 0.51
HLA-C-210ENST00000640219 TRPM4Q8TD43 1214 aa18.23■□□□□ 0.51
HLA-C-210ENST00000640219 RNF186Q9NXI6 227 aa18.23■□□□□ 0.51
HLA-C-210ENST00000640219 RIC1Q4ADV7 1423 aa18.23■□□□□ 0.51
HLA-C-210ENST00000640219 CDHR2Q9BYE9 1310 aa18.23■□□□□ 0.51
HLA-C-210ENST00000640219 DDX10Q13206 875 aaKnown RBP18.22■□□□□ 0.51
HLA-C-210ENST00000640219 CCDC102AQ96A19 550 aa18.22■□□□□ 0.51
HLA-C-210ENST00000640219 PPP2R1AP30153 589 aa18.21■□□□□ 0.51
HLA-C-210ENST00000640219 TNIP1Q15025 636 aa18.21■□□□□ 0.51
HLA-C-210ENST00000640219 SUPT20HQ8NEM7 779 aa18.21■□□□□ 0.51
HLA-C-210ENST00000640219 RAD17O75943 681 aa18.2■□□□□ 0.5
HLA-C-210ENST00000640219 DLK2Q6UY11 383 aa18.2■□□□□ 0.5
HLA-C-210ENST00000640219 C2orf69Q8N8R5 385 aa18.2■□□□□ 0.5
HLA-C-210ENST00000640219 GCC1Q96CN9 775 aa18.2■□□□□ 0.5
HLA-C-210ENST00000640219 CNOT7Q9UIV1 285 aaKnown RBP18.2■□□□□ 0.5
HLA-C-210ENST00000640219 ZNF157P51786 506 aaPredicted RBP18.19■□□□□ 0.5
HLA-C-210ENST00000640219 NGEFQ8N5V2 710 aa18.19■□□□□ 0.5
HLA-C-210ENST00000640219 GBA2Q9HCG7 927 aaPredicted RBP18.19■□□□□ 0.5
HLA-C-210ENST00000640219 HPS5Q9UPZ3 1129 aa18.19■□□□□ 0.5
HLA-C-210ENST00000640219 ATP6V0A2Q9Y487 856 aa18.19■□□□□ 0.5
HLA-C-210ENST00000640219 ERVV-1B6SEH8 477 aa18.18■□□□□ 0.5
HLA-C-210ENST00000640219 H7C1D1 291 aa18.18■□□□□ 0.5
HLA-C-210ENST00000640219 GPTP24298 496 aa18.18■□□□□ 0.5
HLA-C-210ENST00000640219 RTFDC1Q9BY42 306 aaPredicted RBP18.18■□□□□ 0.5
HLA-C-210ENST00000640219 SHTN1A0MZ66 631 aa18.17■□□□□ 0.5
HLA-C-210ENST00000640219 SUSD4Q5VX71 490 aa18.17■□□□□ 0.5
HLA-C-210ENST00000640219 C3orf67Q6ZVT6 689 aa18.17■□□□□ 0.5
HLA-C-210ENST00000640219 PHACTR3Q96KR7 559 aa18.17■□□□□ 0.5
HLA-C-210ENST00000640219 MAP3K15Q6ZN16 1313 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms