RNA–Protein interactions for RNA: ENST00000639824.1

HNRNPU-221, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-221ENST00000639824 CHRNA2Q15822 529 aa13.74□□□□□ -0.21
HNRNPU-221ENST00000639824 NUTM1Q86Y26 1132 aa13.74□□□□□ -0.21
HNRNPU-221ENST00000639824 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
HNRNPU-221ENST00000639824 ZNF496Q96IT1 587 aaPredicted RBP13.74□□□□□ -0.21
HNRNPU-221ENST00000639824 ECHDC1Q9NTX5 307 aa13.74□□□□□ -0.21
HNRNPU-221ENST00000639824 SLC39A6Q13433 755 aa13.73□□□□□ -0.21
HNRNPU-221ENST00000639824 CWF19L2Q2TBE0 894 aaKnown RBP13.73□□□□□ -0.21
HNRNPU-221ENST00000639824 ANKRD13DQ6ZTN6 518 aa13.73□□□□□ -0.21
HNRNPU-221ENST00000639824 SLAIN2Q9P270 581 aa13.73□□□□□ -0.21
HNRNPU-221ENST00000639824 AFDNP55196 1824 aaKnown RBP13.73□□□□□ -0.21
HNRNPU-221ENST00000639824 UBR2Q8IWV8 1755 aa13.72□□□□□ -0.21
HNRNPU-221ENST00000639824 ARFGEF2Q9Y6D5 1785 aa13.72□□□□□ -0.21
HNRNPU-221ENST00000639824 NHSL1Q5SYE7 1610 aa13.72□□□□□ -0.21
HNRNPU-221ENST00000639824 COL5A2P05997 1499 aaPredicted RBP13.72□□□□□ -0.21
HNRNPU-221ENST00000639824 NEURL1BA8MQ27 555 aa13.72□□□□□ -0.21
HNRNPU-221ENST00000639824 HSPA2P54652 639 aa13.72□□□□□ -0.21
HNRNPU-221ENST00000639824 AIMP1Q12904 312 aaKnown RBP13.72□□□□□ -0.21
HNRNPU-221ENST00000639824 TSHZ3Q63HK5 1081 aa13.72□□□□□ -0.21
HNRNPU-221ENST00000639824 KIAA1211Q6ZU35 1233 aa13.72□□□□□ -0.21
HNRNPU-221ENST00000639824 ZCRB1Q8TBF4 217 aaKnown RBP13.72□□□□□ -0.21
HNRNPU-221ENST00000639824 XAGE3Q8WTP9 111 aa13.72□□□□□ -0.21
HNRNPU-221ENST00000639824 PAPPAQ13219 1627 aa13.71□□□□□ -0.21
HNRNPU-221ENST00000639824 PRAMEF22A3QJZ6 481 aa13.71□□□□□ -0.21
HNRNPU-221ENST00000639824 SGSM2O43147 1006 aa13.71□□□□□ -0.21
HNRNPU-221ENST00000639824 NEK4P51957 841 aa13.71□□□□□ -0.21
HNRNPU-221ENST00000639824 GCKRQ14397 625 aa13.71□□□□□ -0.21
HNRNPU-221ENST00000639824 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.21
HNRNPU-221ENST00000639824 TOM1L2Q6ZVM7 507 aa13.71□□□□□ -0.21
HNRNPU-221ENST00000639824 COPS6Q7L5N1 327 aa13.71□□□□□ -0.21
HNRNPU-221ENST00000639824 INTS4Q96HW7 963 aaKnown RBP13.71□□□□□ -0.21
HNRNPU-221ENST00000639824 SUCLG2Q96I99 432 aa13.71□□□□□ -0.21
HNRNPU-221ENST00000639824 CARD10Q9BWT7 1032 aa13.71□□□□□ -0.21
HNRNPU-221ENST00000639824 RAD50Q92878 1312 aa13.71□□□□□ -0.22
HNRNPU-221ENST00000639824 IGKV5-2P06315 115 aa13.7□□□□□ -0.22
HNRNPU-221ENST00000639824 HSPA4P34932 840 aa13.7□□□□□ -0.22
HNRNPU-221ENST00000639824 EVI5LQ96CN4 794 aa13.7□□□□□ -0.22
HNRNPU-221ENST00000639824 BICC1Q9H694 974 aaKnown RBP13.7□□□□□ -0.22
HNRNPU-221ENST00000639824 GLI3P10071 1580 aa13.69□□□□□ -0.22
HNRNPU-221ENST00000639824 GOLGA6L3A6NEY3 463 aa13.69□□□□□ -0.22
HNRNPU-221ENST00000639824 MYL6BP14649 208 aa13.69□□□□□ -0.22
HNRNPU-221ENST00000639824 IL2RBP14784 551 aa13.69□□□□□ -0.22
HNRNPU-221ENST00000639824 UNC5CLQ8IV45 518 aa13.69□□□□□ -0.22
HNRNPU-221ENST00000639824 PLBD2Q8NHP8 589 aa13.69□□□□□ -0.22
HNRNPU-221ENST00000639824 MYD88Q99836 296 aa13.69□□□□□ -0.22
HNRNPU-221ENST00000639824 DIAPH3Q9NSV4 1193 aa13.69□□□□□ -0.22
HNRNPU-221ENST00000639824 LRP10Q7Z4F1 713 aa13.68□□□□□ -0.22
HNRNPU-221ENST00000639824 CYP2E1P05181 493 aaPredicted RBP13.67□□□□□ -0.22
HNRNPU-221ENST00000639824 CUL4AQ13619 759 aa13.67□□□□□ -0.22
HNRNPU-221ENST00000639824 IER5LQ5T953 404 aa13.67□□□□□ -0.22
HNRNPU-221ENST00000639824 AACSQ86V21 672 aa13.67□□□□□ -0.22
HNRNPU-221ENST00000639824 KAZALD1Q96I82 304 aa13.67□□□□□ -0.22
HNRNPU-221ENST00000639824 COPRSQ9NQ92 184 aa13.67□□□□□ -0.22
HNRNPU-221ENST00000639824 USP16Q9Y5T5 823 aa13.67□□□□□ -0.22
HNRNPU-221ENST00000639824 SHANK3Q9BYB0 1731 aa13.66□□□□□ -0.22
HNRNPU-221ENST00000639824 FSD2A1L4K1 749 aa13.66□□□□□ -0.22
HNRNPU-221ENST00000639824 BAG4O95429 457 aaKnown RBP13.66□□□□□ -0.22
HNRNPU-221ENST00000639824 SSFA2P28290 1259 aa13.66□□□□□ -0.22
HNRNPU-221ENST00000639824 RABL6Q3YEC7 729 aaPredicted RBP13.66□□□□□ -0.22
HNRNPU-221ENST00000639824 TICAM2Q86XR7 235 aa13.66□□□□□ -0.22
HNRNPU-221ENST00000639824 TMX3Q96JJ7 454 aa13.66□□□□□ -0.22
HNRNPU-221ENST00000639824 NUP188Q5SRE5 1749 aa13.65□□□□□ -0.22
HNRNPU-221ENST00000639824 KCPQ6ZWJ8 1503 aa13.65□□□□□ -0.22
HNRNPU-221ENST00000639824 TNS2Q63HR2 1409 aa13.65□□□□□ -0.22
HNRNPU-221ENST00000639824 RFX7Q2KHR2 1363 aa13.65□□□□□ -0.22
HNRNPU-221ENST00000639824 EVA1CP58658 441 aa13.65□□□□□ -0.22
HNRNPU-221ENST00000639824 TEX13AQ9BXU3 409 aaPredicted RBP13.65□□□□□ -0.22
HNRNPU-221ENST00000639824 LSG1Q9H089 658 aaKnown RBP13.65□□□□□ -0.22
HNRNPU-221ENST00000639824 PA2G4Q9UQ80 394 aaKnown RBP13.65□□□□□ -0.22
HNRNPU-221ENST00000639824 SASH1O94885 1247 aa13.64□□□□□ -0.23
HNRNPU-221ENST00000639824 PSEN1P49768 467 aa13.64□□□□□ -0.23
HNRNPU-221ENST00000639824 MRE11P49959 708 aa13.64□□□□□ -0.23
HNRNPU-221ENST00000639824 PDAP1Q13442 181 aaKnown RBP13.64□□□□□ -0.23
HNRNPU-221ENST00000639824 KLHL40Q2TBA0 621 aa13.64□□□□□ -0.23
HNRNPU-221ENST00000639824 PALD1Q9ULE6 856 aa13.64□□□□□ -0.23
HNRNPU-221ENST00000639824 ZNF335Q9H4Z2 1342 aaPredicted RBP13.63□□□□□ -0.23
HNRNPU-221ENST00000639824 MAP4K4O95819 1239 aaPredicted RBP13.63□□□□□ -0.23
HNRNPU-221ENST00000639824 CWC27Q6UX04 472 aaKnown RBP13.63□□□□□ -0.23
HNRNPU-221ENST00000639824 TM6SF1Q9BZW5 370 aa13.63□□□□□ -0.23
HNRNPU-221ENST00000639824 SNRKQ9NRH2 765 aa13.63□□□□□ -0.23
HNRNPU-221ENST00000639824 A0A087WZG4 1122 aa13.62□□□□□ -0.23
HNRNPU-221ENST00000639824 KCNB2Q92953 911 aa13.62□□□□□ -0.23
HNRNPU-221ENST00000639824 EAF2Q96CJ1 260 aaPredicted RBP13.62□□□□□ -0.23
HNRNPU-221ENST00000639824 CWC25Q9NXE8 425 aaPredicted RBP13.62□□□□□ -0.23
HNRNPU-221ENST00000639824 COL14A1Q05707 1796 aaKnown RBP13.62□□□□□ -0.23
HNRNPU-221ENST00000639824 POTEB2H3BUK9 544 aa13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 PDIA4P13667 645 aaKnown RBP13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 ZKSCAN1P17029 563 aaPredicted RBP13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 VSIG10Q8N0Z9 540 aa13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 CCDC191Q8NCU4 936 aa13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 SNX14Q9Y5W7 946 aa13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 H7C1W4 665 aa13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 ATP5JP18859 108 aa13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 RFX5P48382 616 aaPredicted RBP13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 RNF20Q5VTR2 975 aa13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 ZGPATQ8N5A5 531 aaKnown RBP13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 ZSCAN31Q96LW9 406 aaPredicted RBP13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 GZF1Q9H116 711 aaPredicted RBP13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 GPR108Q9NPR9 543 aa13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 ATG3Q9NT62 314 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms