RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 RRS1Q15050 365 aaKnown RBP8.43□□□□□ -1.06
RTTN-215ENST00000639487 NBPF14Q5TI25 921 aa8.43□□□□□ -1.06
RTTN-215ENST00000639487 LRRC4BQ9NT99 713 aa8.43□□□□□ -1.06
RTTN-215ENST00000639487 METTL16Q86W50 562 aaKnown RBP8.43□□□□□ -1.06
RTTN-215ENST00000639487 SAGE1Q9NXZ1 904 aa8.43□□□□□ -1.06
RTTN-215ENST00000639487 LCTP09848 1927 aa8.42□□□□□ -1.06
RTTN-215ENST00000639487 FAM205AQ6ZU69 1335 aa8.42□□□□□ -1.06
RTTN-215ENST00000639487 GYS1P13807 737 aa8.42□□□□□ -1.06
RTTN-215ENST00000639487 KCNA3P22001 575 aa8.42□□□□□ -1.06
RTTN-215ENST00000639487 CCT4P50991 539 aaKnown RBP8.42□□□□□ -1.06
RTTN-215ENST00000639487 PLIN4Q96Q06 1357 aa8.42□□□□□ -1.06
RTTN-215ENST00000639487 MBIPQ9NS73 344 aa8.41□□□□□ -1.06
RTTN-215ENST00000639487 EVA1CP58658 441 aa8.41□□□□□ -1.06
RTTN-215ENST00000639487 ZCCHC17Q9NP64 241 aaKnown RBP8.41□□□□□ -1.06
RTTN-215ENST00000639487 PLXNA1Q9UIW2 1896 aa8.41□□□□□ -1.06
RTTN-215ENST00000639487 FKBP1CQ5VVH2 108 aa8.4□□□□□ -1.06
RTTN-215ENST00000639487 SAMD1Q6SPF0 538 aaPredicted RBP8.4□□□□□ -1.06
RTTN-215ENST00000639487 KSR2Q6VAB6 950 aa8.4□□□□□ -1.06
RTTN-215ENST00000639487 REM2Q8IYK8 340 aaPredicted RBP8.4□□□□□ -1.06
RTTN-215ENST00000639487 TCIRG1Q13488 830 aa8.4□□□□□ -1.06
RTTN-215ENST00000639487 IRF5Q13568 498 aa8.4□□□□□ -1.06
RTTN-215ENST00000639487 CNGB1Q14028 1251 aaPredicted RBP8.4□□□□□ -1.06
RTTN-215ENST00000639487 OSBPL3Q9H4L5 887 aa8.4□□□□□ -1.06
RTTN-215ENST00000639487 NBPF26B4DH59 902 aa8.4□□□□□ -1.07
RTTN-215ENST00000639487 HDAC1Q13547 482 aaPredicted RBP8.4□□□□□ -1.07
RTTN-215ENST00000639487 ZNF827Q17R98 1081 aa8.4□□□□□ -1.07
RTTN-215ENST00000639487 BEND3Q5T5X7 828 aa8.4□□□□□ -1.07
RTTN-215ENST00000639487 NBPF10Q6P3W6 841 aaKnown RBP8.4□□□□□ -1.07
RTTN-215ENST00000639487 NBPF15Q8N660 670 aa8.4□□□□□ -1.07
RTTN-215ENST00000639487 ZBTB38Q8NAP3 1195 aaPredicted RBP8.4□□□□□ -1.07
RTTN-215ENST00000639487 TMC1Q8TDI8 760 aa8.4□□□□□ -1.07
RTTN-215ENST00000639487 STK32BQ9NY57 414 aa8.4□□□□□ -1.07
RTTN-215ENST00000639487 MAPK8IP3Q9UPT6 1336 aa8.4□□□□□ -1.07
RTTN-215ENST00000639487 GOLGA2Q08379 1002 aa8.39□□□□□ -1.07
RTTN-215ENST00000639487 SMYD5Q6GMV2 418 aa8.39□□□□□ -1.07
RTTN-215ENST00000639487 AEBP1Q8IUX7 1158 aa8.39□□□□□ -1.07
RTTN-215ENST00000639487 FAM177A1Q8N128 213 aaPredicted RBP8.39□□□□□ -1.07
RTTN-215ENST00000639487 VGLL2Q8N8G2 317 aa8.39□□□□□ -1.07
RTTN-215ENST00000639487 LINS1Q8NG48 757 aa8.39□□□□□ -1.07
RTTN-215ENST00000639487 API5Q9BZZ5 524 aaKnown RBP8.39□□□□□ -1.07
RTTN-215ENST00000639487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.39□□□□□ -1.07
RTTN-215ENST00000639487 PPP2R3BQ9Y5P8 575 aa8.39□□□□□ -1.07
RTTN-215ENST00000639487 ATRNL1Q5VV63 1379 aa8.39□□□□□ -1.07
RTTN-215ENST00000639487 KDM2BQ8NHM5 1336 aa8.39□□□□□ -1.07
RTTN-215ENST00000639487 CRKLP46109 303 aaKnown RBP8.38□□□□□ -1.07
RTTN-215ENST00000639487 CABP4P57796 275 aa8.38□□□□□ -1.07
RTTN-215ENST00000639487 FAM98CQ17RN3 349 aaKnown RBP8.38□□□□□ -1.07
RTTN-215ENST00000639487 RFX5P48382 616 aaPredicted RBP8.38□□□□□ -1.07
RTTN-215ENST00000639487 NOVP48745 357 aa8.38□□□□□ -1.07
RTTN-215ENST00000639487 ILDR2Q71H61 639 aa8.38□□□□□ -1.07
RTTN-215ENST00000639487 FAM163AQ96GL9 167 aaPredicted RBP8.38□□□□□ -1.07
RTTN-215ENST00000639487 RPS12P25398 132 aaKnown RBP8.37□□□□□ -1.07
RTTN-215ENST00000639487 BRD2P25440 801 aaKnown RBP8.37□□□□□ -1.07
RTTN-215ENST00000639487 PIP4K2BP78356 416 aa8.37□□□□□ -1.07
RTTN-215ENST00000639487 SP8Q8IXZ3 490 aa8.37□□□□□ -1.07
RTTN-215ENST00000639487 SUPT20HQ8NEM7 779 aa8.37□□□□□ -1.07
RTTN-215ENST00000639487 FGFR2P21802 821 aa8.37□□□□□ -1.07
RTTN-215ENST00000639487 MTA3Q9BTC8 594 aa8.37□□□□□ -1.07
RTTN-215ENST00000639487 COPRSQ9NQ92 184 aa8.37□□□□□ -1.07
RTTN-215ENST00000639487 BTBD11A6QL63 1104 aa8.36□□□□□ -1.07
RTTN-215ENST00000639487 NPR1P16066 1061 aa8.36□□□□□ -1.07
RTTN-215ENST00000639487 PDE6BP35913 854 aa8.36□□□□□ -1.07
RTTN-215ENST00000639487 WDR43Q15061 677 aaKnown RBP eCLIP8.36□□□□□ -1.07
RTTN-215ENST00000639487 FBXL16Q8N461 479 aa8.36□□□□□ -1.07
RTTN-215ENST00000639487 CABLES1Q8TDN4 633 aa8.36□□□□□ -1.07
RTTN-215ENST00000639487 IL1R1P14778 569 aa8.36□□□□□ -1.07
RTTN-215ENST00000639487 RARSP54136 660 aaKnown RBP8.36□□□□□ -1.07
RTTN-215ENST00000639487 MAP3K11Q16584 847 aa8.36□□□□□ -1.07
RTTN-215ENST00000639487 CDC5LQ99459 802 aaKnown RBP8.36□□□□□ -1.07
RTTN-215ENST00000639487 MYH4Q9Y623 1939 aa8.35□□□□□ -1.07
RTTN-215ENST00000639487 BBOX1O75936 387 aa8.35□□□□□ -1.07
RTTN-215ENST00000639487 ZC3H6P61129 1189 aaKnown RBP8.35□□□□□ -1.07
RTTN-215ENST00000639487 ZNF280AP59817 542 aaPredicted RBP8.35□□□□□ -1.07
RTTN-215ENST00000639487 MROH5Q6ZUA9 1318 aa8.35□□□□□ -1.07
RTTN-215ENST00000639487 TANC1Q9C0D5 1861 aa8.34□□□□□ -1.07
RTTN-215ENST00000639487 DDX58O95786 925 aaKnown RBP8.34□□□□□ -1.07
RTTN-215ENST00000639487 RIPK4P57078 832 aa8.34□□□□□ -1.07
RTTN-215ENST00000639487 DIEXFQ68CQ4 756 aaKnown RBP8.34□□□□□ -1.07
RTTN-215ENST00000639487 SSH3Q8TE77 659 aa8.34□□□□□ -1.07
RTTN-215ENST00000639487 SENP3Q9H4L4 574 aaPredicted RBP8.34□□□□□ -1.07
RTTN-215ENST00000639487 FOXO4P98177 505 aa8.34□□□□□ -1.07
RTTN-215ENST00000639487 NLRP2Q9NX02 1062 aa8.34□□□□□ -1.07
RTTN-215ENST00000639487 DOCK5Q9H7D0 1870 aa8.33□□□□□ -1.08
RTTN-215ENST00000639487 CHRNA2Q15822 529 aa8.33□□□□□ -1.08
RTTN-215ENST00000639487 PPP1R42Q7Z4L9 355 aa8.33□□□□□ -1.08
RTTN-215ENST00000639487 NLRP10Q86W26 655 aa8.33□□□□□ -1.08
RTTN-215ENST00000639487 STAP2Q9UGK3 403 aa8.33□□□□□ -1.08
RTTN-215ENST00000639487 CCNL1Q9UK58 526 aaPredicted RBP8.33□□□□□ -1.08
RTTN-215ENST00000639487 LEMD3Q9Y2U8 911 aa8.33□□□□□ -1.08
RTTN-215ENST00000639487 UBN2Q6ZU65 1347 aa8.33□□□□□ -1.08
RTTN-215ENST00000639487 LTBP2Q14767 1821 aa8.33□□□□□ -1.08
RTTN-215ENST00000639487 FZD9O00144 591 aa8.33□□□□□ -1.08
RTTN-215ENST00000639487 NEFMP07197 916 aa8.33□□□□□ -1.08
RTTN-215ENST00000639487 COL23A1Q86Y22 540 aaPredicted RBP8.33□□□□□ -1.08
RTTN-215ENST00000639487 LGR6Q9HBX8 967 aa8.33□□□□□ -1.08
RTTN-215ENST00000639487 RAB11FIP3O75154 756 aa8.32□□□□□ -1.08
RTTN-215ENST00000639487 RTF1Q92541 710 aaKnown RBP8.32□□□□□ -1.08
RTTN-215ENST00000639487 RTCBQ9Y3I0 505 aaKnown RBP8.32□□□□□ -1.08
RTTN-215ENST00000639487 KIAA1671Q9BY89 1806 aa8.32□□□□□ -1.08
RTTN-215ENST00000639487 NEURL1BA8MQ27 555 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms