RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 SOGA3Q5TF21 947 aa16.82■□□□□ 0.28
SCARB2-216ENST00000639300 KLHDC4Q8TBB5 520 aa16.82■□□□□ 0.28
SCARB2-216ENST00000639300 IP6K1Q92551 441 aa16.82■□□□□ 0.28
SCARB2-216ENST00000639300 GOLGA8AA7E2F4 631 aa16.82■□□□□ 0.28
SCARB2-216ENST00000639300 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
SCARB2-216ENST00000639300 CCP110O43303 1012 aa16.81■□□□□ 0.28
SCARB2-216ENST00000639300 KRT18P05783 430 aaKnown RBP16.81■□□□□ 0.28
SCARB2-216ENST00000639300 INSRP06213 1382 aa16.81■□□□□ 0.28
SCARB2-216ENST00000639300 NBPF7P0C2Y1 421 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-216ENST00000639300 CHST3Q7LGC8 479 aa16.81■□□□□ 0.28
SCARB2-216ENST00000639300 TRMT2AQ8IZ69 625 aaKnown RBP16.81■□□□□ 0.28
SCARB2-216ENST00000639300 C16orf45Q96MC5 204 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-216ENST00000639300 IQSEC3Q9UPP2 1182 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-216ENST00000639300 SLC5A1P13866 664 aa16.81■□□□□ 0.28
SCARB2-216ENST00000639300 CBFA2T2O43439 604 aa16.8■□□□□ 0.28
SCARB2-216ENST00000639300 CCAR1Q8IX12 1150 aaKnown RBP16.8■□□□□ 0.28
SCARB2-216ENST00000639300 ORAI2Q96SN7 254 aa16.8■□□□□ 0.28
SCARB2-216ENST00000639300 EDC4Q6P2E9 1401 aaKnown RBP16.8■□□□□ 0.28
SCARB2-216ENST00000639300 KLF18A0A0U1RQI7 1052 aa16.8■□□□□ 0.28
SCARB2-216ENST00000639300 DACT1Q9NYF0 836 aa16.8■□□□□ 0.28
SCARB2-216ENST00000639300 ZNF521Q96K83 1311 aa16.8■□□□□ 0.28
SCARB2-216ENST00000639300 IARSP41252 1262 aaKnown RBP16.8■□□□□ 0.28
SCARB2-216ENST00000639300 MCMDC2Q4G0Z9 681 aa16.8■□□□□ 0.28
SCARB2-216ENST00000639300 BICC1Q9H694 974 aaKnown RBP16.8■□□□□ 0.28
SCARB2-216ENST00000639300 ZNF652Q9Y2D9 606 aa16.8■□□□□ 0.28
SCARB2-216ENST00000639300 CCDC196A0A1B0GTZ2 297 aa16.79■□□□□ 0.28
SCARB2-216ENST00000639300 RNMTO43148 476 aaKnown RBP16.79■□□□□ 0.28
SCARB2-216ENST00000639300 F13A1P00488 732 aa16.79■□□□□ 0.28
SCARB2-216ENST00000639300 PTPN14Q15678 1187 aa16.79■□□□□ 0.28
SCARB2-216ENST00000639300 Q6ZUG5 572 aa16.79■□□□□ 0.28
SCARB2-216ENST00000639300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.79■□□□□ 0.286e-6■■■■■ 38.2
SCARB2-216ENST00000639300 DHX8Q14562 1220 aaKnown RBP16.79■□□□□ 0.28
SCARB2-216ENST00000639300 TMEM67Q5HYA8 995 aa16.79■□□□□ 0.28
SCARB2-216ENST00000639300 ATP10AO60312 1499 aa16.79■□□□□ 0.28
SCARB2-216ENST00000639300 STIM1Q13586 685 aa16.79■□□□□ 0.28
SCARB2-216ENST00000639300 ZNHIT6Q9NWK9 470 aaKnown RBP16.79■□□□□ 0.28
SCARB2-216ENST00000639300 USP19O94966 1318 aa16.79■□□□□ 0.28
SCARB2-216ENST00000639300 DDX21Q9NR30 783 aaKnown RBP eCLIP16.79■□□□□ 0.28
SCARB2-216ENST00000639300 USP5P45974 858 aa16.78■□□□□ 0.28
SCARB2-216ENST00000639300 CREB3L3Q68CJ9 461 aa16.78■□□□□ 0.28
SCARB2-216ENST00000639300 MKNK2Q9HBH9 465 aa16.78■□□□□ 0.28
SCARB2-216ENST00000639300 ATP2B3Q16720 1220 aa16.78■□□□□ 0.28
SCARB2-216ENST00000639300 IQCA1Q86XH1 822 aa16.78■□□□□ 0.28
SCARB2-216ENST00000639300 NCOA7Q8NI08 942 aa16.78■□□□□ 0.28
SCARB2-216ENST00000639300 ZSCAN29Q8IWY8 852 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-216ENST00000639300 CNNM3Q8NE01 707 aa16.78■□□□□ 0.28
SCARB2-216ENST00000639300 RUFY1Q96T51 708 aa16.78■□□□□ 0.28
SCARB2-216ENST00000639300 TTC41PQ6P2S7 1318 aa16.78■□□□□ 0.28
SCARB2-216ENST00000639300 RBM5P52756 815 aaKnown RBP eCLIP16.77■□□□□ 0.28
SCARB2-216ENST00000639300 TFCP2Q12800 502 aa16.77■□□□□ 0.28
SCARB2-216ENST00000639300 CTCFLQ8NI51 663 aaPredicted RBP16.77■□□□□ 0.28
SCARB2-216ENST00000639300 CTAGE5O15320 804 aa16.77■□□□□ 0.28
SCARB2-216ENST00000639300 RRP9O43818 475 aaKnown RBP16.77■□□□□ 0.28
SCARB2-216ENST00000639300 SYT1P21579 422 aa16.77■□□□□ 0.28
SCARB2-216ENST00000639300 TEX13AQ9BXU3 409 aaPredicted RBP16.77■□□□□ 0.28
SCARB2-216ENST00000639300 NPHP3Q7Z494 1330 aa16.77■□□□□ 0.27
SCARB2-216ENST00000639300 TIMM10P62072 90 aa16.77■□□□□ 0.27
SCARB2-216ENST00000639300 TTC12Q9H892 705 aaPredicted RBP16.77■□□□□ 0.27
SCARB2-216ENST00000639300 MCM5P33992 734 aa16.77■□□□□ 0.27
SCARB2-216ENST00000639300 IL15P40933 162 aaPredicted RBP16.77■□□□□ 0.27
SCARB2-216ENST00000639300 SLC4A8Q2Y0W8 1093 aa16.77■□□□□ 0.27
SCARB2-216ENST00000639300 NBPF6Q5VWK0 638 aa16.76■□□□□ 0.27
SCARB2-216ENST00000639300 HELBQ8NG08 1087 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-216ENST00000639300 NBPF4Q96M43 638 aa16.76■□□□□ 0.27
SCARB2-216ENST00000639300 TANGO6Q9C0B7 1094 aa16.76■□□□□ 0.27
SCARB2-216ENST00000639300 ZPR1O75312 459 aa16.76■□□□□ 0.27
SCARB2-216ENST00000639300 METAP2P50579 478 aaKnown RBP eCLIP16.76■□□□□ 0.27
SCARB2-216ENST00000639300 PDCL2Q8N4E4 241 aa16.76■□□□□ 0.27
SCARB2-216ENST00000639300 TNNT1P13805 278 aa16.76■□□□□ 0.27
SCARB2-216ENST00000639300 LTKP29376 864 aa16.76■□□□□ 0.27
SCARB2-216ENST00000639300 C19orf44Q9H6X5 657 aa16.76■□□□□ 0.27
SCARB2-216ENST00000639300 ANKIB1Q9P2G1 1089 aa16.76■□□□□ 0.27
SCARB2-216ENST00000639300 SBNO2Q9Y2G9 1366 aa16.76■□□□□ 0.27
SCARB2-216ENST00000639300 CLCN1P35523 988 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 SSRP1Q08945 709 aaKnown RBP16.75■□□□□ 0.27
SCARB2-216ENST00000639300 DZIP1Q86YF9 867 aaKnown RBP16.75■□□□□ 0.27
SCARB2-216ENST00000639300 SLC26A6Q9BXS9 759 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 ACBD3Q9H3P7 528 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 PLA2R1Q13018 1463 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 KDM5CP41229 1560 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 SLC9C2Q5TAH2 1124 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 FAM173BQ6P4H8 233 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 PLEKHF1Q96S99 279 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 CEP131Q9UPN4 1083 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 UGGT1Q9NYU2 1555 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 ERVK-7P63135 1459 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 CPLX3Q8WVH0 158 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 UBXN4Q92575 508 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 DEF6Q9H4E7 631 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 ZSCAN16Q9H4T2 348 aaPredicted RBP16.75■□□□□ 0.27
SCARB2-216ENST00000639300 PAG1Q9NWQ8 432 aa16.75■□□□□ 0.27
SCARB2-216ENST00000639300 INTS4Q96HW7 963 aaKnown RBP16.74■□□□□ 0.27
SCARB2-216ENST00000639300 SKIDA1Q1XH10 827 aa16.74■□□□□ 0.27
SCARB2-216ENST00000639300 SBNO1A3KN83 1393 aa16.74■□□□□ 0.27
SCARB2-216ENST00000639300 GSPT1P15170 499 aaKnown RBP16.74■□□□□ 0.27
SCARB2-216ENST00000639300 ZNF790Q6PG37 636 aa16.74■□□□□ 0.27
SCARB2-216ENST00000639300 RNF41Q9H4P4 317 aaPredicted RBP16.74■□□□□ 0.27
SCARB2-216ENST00000639300 TOP1P11387 765 aaKnown RBP16.74■□□□□ 0.27
SCARB2-216ENST00000639300 HSPA2P54652 639 aa16.74■□□□□ 0.27
SCARB2-216ENST00000639300 ANO6Q4KMQ2 910 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms