RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 XAGE3Q8WTP9 111 aa10.41□□□□□ -0.74
NECAP1-210ENST00000638237 EPB41L2O43491 1005 aaKnown RBP10.41□□□□□ -0.74
NECAP1-210ENST00000638237 PTMAP06454 111 aaKnown RBP10.41□□□□□ -0.74
NECAP1-210ENST00000638237 UVSSAQ2YD98 709 aa10.41□□□□□ -0.74
NECAP1-210ENST00000638237 FOXD4L6Q3SYB3 417 aaPredicted RBP10.41□□□□□ -0.74
NECAP1-210ENST00000638237 FOXD4L3Q6VB84 417 aaPredicted RBP10.41□□□□□ -0.74
NECAP1-210ENST00000638237 COPS6Q7L5N1 327 aa10.41□□□□□ -0.74
NECAP1-210ENST00000638237 HYPKQ9NX55 129 aa10.41□□□□□ -0.74
NECAP1-210ENST00000638237 TLR7Q9NYK1 1049 aaKnown RBP10.41□□□□□ -0.74
NECAP1-210ENST00000638237 FBXO3Q9UK99 471 aa10.41□□□□□ -0.74
NECAP1-210ENST00000638237 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.41□□□□□ -0.74
NECAP1-210ENST00000638237 TNS3Q68CZ2 1445 aa10.4□□□□□ -0.74
NECAP1-210ENST00000638237 CPA1P15085 419 aa10.4□□□□□ -0.74
NECAP1-210ENST00000638237 EPHA10Q5JZY3 1008 aa10.4□□□□□ -0.74
NECAP1-210ENST00000638237 LINS1Q8NG48 757 aa10.4□□□□□ -0.74
NECAP1-210ENST00000638237 MYD88Q99836 296 aa10.4□□□□□ -0.74
NECAP1-210ENST00000638237 ARFGEF2Q9Y6D5 1785 aa10.4□□□□□ -0.74
NECAP1-210ENST00000638237 AOX1Q06278 1338 aa10.4□□□□□ -0.74
NECAP1-210ENST00000638237 WDR33Q9C0J8 1336 aaKnown RBP10.4□□□□□ -0.74
NECAP1-210ENST00000638237 SGSM2O43147 1006 aa10.4□□□□□ -0.75
NECAP1-210ENST00000638237 SASH1O94885 1247 aa10.4□□□□□ -0.75
NECAP1-210ENST00000638237 MTX1Q13505 466 aa10.4□□□□□ -0.75
NECAP1-210ENST00000638237 CLASRPQ8N2M8 674 aaKnown RBP10.4□□□□□ -0.75
NECAP1-210ENST00000638237 TMEM87AQ8NBN3 555 aa10.4□□□□□ -0.75
NECAP1-210ENST00000638237 CCDC8Q9H0W5 538 aaPredicted RBP10.4□□□□□ -0.75
NECAP1-210ENST00000638237 ALDH1L1O75891 902 aa10.39□□□□□ -0.75
NECAP1-210ENST00000638237 USP48Q86UV5 1035 aa10.39□□□□□ -0.75
NECAP1-210ENST00000638237 AACSQ86V21 672 aa10.39□□□□□ -0.75
NECAP1-210ENST00000638237 RASEFQ8IZ41 740 aa10.39□□□□□ -0.75
NECAP1-210ENST00000638237 IFNL2Q8IZJ0 200 aa10.39□□□□□ -0.75
NECAP1-210ENST00000638237 CNTROBQ8N137 903 aa10.39□□□□□ -0.75
NECAP1-210ENST00000638237 DDX54Q8TDD1 881 aaKnown RBP10.39□□□□□ -0.75
NECAP1-210ENST00000638237 PKD1L3Q7Z443 1732 aa10.39□□□□□ -0.75
NECAP1-210ENST00000638237 RAD50Q92878 1312 aa10.39□□□□□ -0.75
NECAP1-210ENST00000638237 NEURL1BA8MQ27 555 aa10.39□□□□□ -0.75
NECAP1-210ENST00000638237 GADD45BO75293 160 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-210ENST00000638237 EAF2Q96CJ1 260 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-210ENST00000638237 ATP5J2-PTCD1G3V325 749 aa10.38□□□□□ -0.75
NECAP1-210ENST00000638237 PTCD1O75127 700 aaKnown RBP10.38□□□□□ -0.75
NECAP1-210ENST00000638237 DDX58O95786 925 aaKnown RBP10.38□□□□□ -0.75
NECAP1-210ENST00000638237 HSPA4P34932 840 aa10.38□□□□□ -0.75
NECAP1-210ENST00000638237 MYRIPQ8NFW9 859 aa10.38□□□□□ -0.75
NECAP1-210ENST00000638237 IFIT2P09913 472 aaKnown RBP10.38□□□□□ -0.75
NECAP1-210ENST00000638237 COL9A3Q14050 684 aaPredicted RBP10.38□□□□□ -0.75
NECAP1-210ENST00000638237 CADPS2Q86UW7 1296 aa10.38□□□□□ -0.75
NECAP1-210ENST00000638237 TTC5Q8N0Z6 440 aa10.38□□□□□ -0.75
NECAP1-210ENST00000638237 PIBF1Q8WXW3 757 aa10.38□□□□□ -0.75
NECAP1-210ENST00000638237 CHMP4AQ9BY43 222 aa10.38□□□□□ -0.75
NECAP1-210ENST00000638237 LSG1Q9H089 658 aaKnown RBP10.38□□□□□ -0.75
NECAP1-210ENST00000638237 GDPD2Q9HCC8 539 aa10.38□□□□□ -0.75
NECAP1-210ENST00000638237 NDUFB9Q9Y6M9 179 aa10.38□□□□□ -0.75
NECAP1-210ENST00000638237 GLI3P10071 1580 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 SPATA31A3Q5VYP0 1347 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 GLRX3O76003 335 aaKnown RBP10.37□□□□□ -0.75
NECAP1-210ENST00000638237 PTH1RQ03431 593 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 HSP90AB4PQ58FF6 505 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 CCDC183Q5T5S1 534 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 LRP10Q7Z4F1 713 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 EDC3Q96F86 508 aaKnown RBP10.37□□□□□ -0.75
NECAP1-210ENST00000638237 PRIMPOLQ96LW4 560 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 SNX14Q9Y5W7 946 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 LETM1O95202 739 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-210ENST00000638237 GCKRQ14397 625 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 BRINP3Q76B58 766 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 FAM227BQ96M60 508 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 DIAPH3Q9NSV4 1193 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 ECHDC1Q9NTX5 307 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 PRDM4Q9UKN5 801 aa10.37□□□□□ -0.75
NECAP1-210ENST00000638237 RPAP1Q9BWH6 1393 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-210ENST00000638237 HMGN5P82970 282 aaKnown RBP10.36□□□□□ -0.75
NECAP1-210ENST00000638237 UBE3BQ7Z3V4 1068 aa10.36□□□□□ -0.75
NECAP1-210ENST00000638237 SMAP1Q8IYB5 467 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-210ENST00000638237 BOLA2Q9H3K6 86 aa10.36□□□□□ -0.75
NECAP1-210ENST00000638237 DCCP43146 1447 aa10.36□□□□□ -0.75
NECAP1-210ENST00000638237 TTC41PQ6P2S7 1318 aa10.36□□□□□ -0.75
NECAP1-210ENST00000638237 CHGBP05060 677 aa10.36□□□□□ -0.75
NECAP1-210ENST00000638237 NEXNQ0ZGT2 675 aa10.36□□□□□ -0.75
NECAP1-210ENST00000638237 NOLC1Q14978 699 aaKnown RBP eCLIP10.36□□□□□ -0.75
NECAP1-210ENST00000638237 ADCK5Q3MIX3 580 aa10.36□□□□□ -0.75
NECAP1-210ENST00000638237 LARP1Q6PKG0 1096 aaKnown RBP10.36□□□□□ -0.75
NECAP1-210ENST00000638237 ANKRD13DQ6ZTN6 518 aa10.36□□□□□ -0.75
NECAP1-210ENST00000638237 DCAF5Q96JK2 942 aa10.36□□□□□ -0.75
NECAP1-210ENST00000638237 PRDM11Q9NQV5 511 aa10.36□□□□□ -0.75
NECAP1-210ENST00000638237 USP25Q9UHP3 1055 aa10.36□□□□□ -0.75
NECAP1-210ENST00000638237 CCDC9Q9Y3X0 531 aaKnown RBP10.36□□□□□ -0.75
NECAP1-210ENST00000638237 USP42Q9H9J4 1324 aaKnown RBP10.35□□□□□ -0.75
NECAP1-210ENST00000638237 MRC1P22897 1456 aa10.35□□□□□ -0.75
NECAP1-210ENST00000638237 LAMB4A4D0S4 1761 aa10.35□□□□□ -0.75
NECAP1-210ENST00000638237 SNRPA1P09661 255 aaKnown RBP10.35□□□□□ -0.75
NECAP1-210ENST00000638237 PDIA4P13667 645 aaKnown RBP10.35□□□□□ -0.75
NECAP1-210ENST00000638237 GTF2F1P35269 517 aaKnown RBP eCLIP10.35□□□□□ -0.75
NECAP1-210ENST00000638237 CABP4P57796 275 aa10.35□□□□□ -0.75
NECAP1-210ENST00000638237 G3BP1Q13283 466 aaKnown RBP eCLIP10.35□□□□□ -0.75
NECAP1-210ENST00000638237 DNTTIP2Q5QJE6 756 aaKnown RBP10.35□□□□□ -0.75
NECAP1-210ENST00000638237 TOM1L2Q6ZVM7 507 aa10.35□□□□□ -0.75
NECAP1-210ENST00000638237 METTL22Q9BUU2 404 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-210ENST00000638237 UTYO14607 1347 aa10.35□□□□□ -0.75
NECAP1-210ENST00000638237 LMTK3Q96Q04 1460 aa10.35□□□□□ -0.75
NECAP1-210ENST00000638237 LARGE1O95461 756 aa10.35□□□□□ -0.75
NECAP1-210ENST00000638237 ADCY5O95622 1261 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms