RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 TSPYL6Q8N831 410 aa23.02■■□□□ 1.28
PNKP-230ENST00000638016 RRAGCQ9HB90 399 aa23.02■■□□□ 1.28
PNKP-230ENST00000638016 DBF4Q9UBU7 674 aaPredicted RBP23.02■■□□□ 1.28
PNKP-230ENST00000638016 PARP10Q53GL7 1025 aa23.01■■□□□ 1.27
PNKP-230ENST00000638016 NLRP10Q86W26 655 aa23.01■■□□□ 1.27
PNKP-230ENST00000638016 UTP14AQ9BVJ6 771 aaKnown RBP23.01■■□□□ 1.27
PNKP-230ENST00000638016 SALL2Q9Y467 1007 aaPredicted RBP23.01■■□□□ 1.27
PNKP-230ENST00000638016 CALD1Q05682 793 aaKnown RBP23■■□□□ 1.27
PNKP-230ENST00000638016 TCIRG1Q13488 830 aa23■■□□□ 1.27
PNKP-230ENST00000638016 CCDC93Q567U6 631 aa23■■□□□ 1.27
PNKP-230ENST00000638016 PPP1R42Q7Z4L9 355 aa23■■□□□ 1.27
PNKP-230ENST00000638016 WWC1Q8IX03 1113 aa23■■□□□ 1.27
PNKP-230ENST00000638016 PHAXQ9H814 394 aaKnown RBP23■■□□□ 1.27
PNKP-230ENST00000638016 KDM2BQ8NHM5 1336 aa23■■□□□ 1.27
PNKP-230ENST00000638016 LTBP3Q9NS15 1303 aa23■■□□□ 1.27
PNKP-230ENST00000638016 SNED1Q8TER0 1413 aa22.99■■□□□ 1.27
PNKP-230ENST00000638016 ATP5J2-PTCD1G3V325 749 aa22.98■■□□□ 1.27
PNKP-230ENST00000638016 HCLS1P14317 486 aaPredicted RBP22.98■■□□□ 1.27
PNKP-230ENST00000638016 PLBD2Q8NHP8 589 aa22.98■■□□□ 1.27
PNKP-230ENST00000638016 RPGRQ92834 1020 aaKnown RBP22.98■■□□□ 1.27
PNKP-230ENST00000638016 ZNF277Q9NRM2 450 aaPredicted RBP22.98■■□□□ 1.27
PNKP-230ENST00000638016 ZC3H4Q9UPT8 1303 aaKnown RBP22.98■■□□□ 1.27
PNKP-230ENST00000638016 CEP350Q5VT06 3117 aa22.97■■□□□ 1.27
PNKP-230ENST00000638016 GLTPD2A6NH11 291 aa22.97■■□□□ 1.27
PNKP-230ENST00000638016 TCERG1O14776 1098 aaKnown RBP22.97■■□□□ 1.27
PNKP-230ENST00000638016 HSP90AB3PQ58FF7 597 aa22.97■■□□□ 1.27
PNKP-230ENST00000638016 SOGA3Q5TF21 947 aa22.97■■□□□ 1.27
PNKP-230ENST00000638016 ANKRD13DQ6ZTN6 518 aa22.97■■□□□ 1.27
PNKP-230ENST00000638016 TAF1P21675 1872 aa22.96■■□□□ 1.27
PNKP-230ENST00000638016 TOMM70O94826 608 aa22.96■■□□□ 1.27
PNKP-230ENST00000638016 ALDH1B1P30837 517 aa22.96■■□□□ 1.27
PNKP-230ENST00000638016 CCDC27Q2M243 656 aa22.96■■□□□ 1.27
PNKP-230ENST00000638016 HYPKQ9NX55 129 aa22.96■■□□□ 1.27
PNKP-230ENST00000638016 DDX60Q8IY21 1712 aaKnown RBP22.96■■□□□ 1.27
PNKP-230ENST00000638016 HOXA10P31260 410 aaPredicted RBP22.95■■□□□ 1.26
PNKP-230ENST00000638016 FKBP4Q02790 459 aaKnown RBP eCLIP22.95■■□□□ 1.26
PNKP-230ENST00000638016 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.26
PNKP-230ENST00000638016 TRMT112Q9UI30 125 aaKnown RBP22.95■■□□□ 1.26
PNKP-230ENST00000638016 HSPA6P17066 643 aa22.94■■□□□ 1.26
PNKP-230ENST00000638016 SLC10A5Q5PT55 438 aa22.94■■□□□ 1.26
PNKP-230ENST00000638016 ISCA1Q9BUE6 129 aa22.94■■□□□ 1.26
PNKP-230ENST00000638016 COL4A5P29400 1685 aa22.93■■□□□ 1.26
PNKP-230ENST00000638016 POTECB2RU33 542 aa22.93■■□□□ 1.26
PNKP-230ENST00000638016 RTL5Q5HYW3 569 aaPredicted RBP22.93■■□□□ 1.26
PNKP-230ENST00000638016 RBM17Q96I25 401 aaKnown RBP22.93■■□□□ 1.26
PNKP-230ENST00000638016 NLRP3Q96P20 1036 aa22.93■■□□□ 1.26
PNKP-230ENST00000638016 ABCC4O15439 1325 aa22.92■■□□□ 1.26
PNKP-230ENST00000638016 SH3TC1Q8TE82 1336 aa22.92■■□□□ 1.26
PNKP-230ENST00000638016 WDR90Q96KV7 1748 aa22.92■■□□□ 1.26
PNKP-230ENST00000638016 PPEF1O14829 653 aaPredicted RBP22.92■■□□□ 1.26
PNKP-230ENST00000638016 DDNO94850 711 aaPredicted RBP22.92■■□□□ 1.26
PNKP-230ENST00000638016 C16orf71Q8IYS4 520 aaPredicted RBP22.92■■□□□ 1.26
PNKP-230ENST00000638016 CRAMP1Q96RY5 1269 aa22.92■■□□□ 1.26
PNKP-230ENST00000638016 COL4A1P02462 1669 aa22.92■■□□□ 1.26
PNKP-230ENST00000638016 RIC3Q7Z5B4 369 aa22.91■■□□□ 1.26
PNKP-230ENST00000638016 FAM89AQ96GI7 184 aa22.91■■□□□ 1.26
PNKP-230ENST00000638016 RNF123Q5XPI4 1314 aa22.9■■□□□ 1.26
PNKP-230ENST00000638016 ZNF541Q9H0D2 1346 aa22.9■■□□□ 1.26
PNKP-230ENST00000638016 RTKN2Q8IZC4 609 aa22.9■■□□□ 1.26
PNKP-230ENST00000638016 FANCIQ9NVI1 1328 aa22.89■■□□□ 1.26
PNKP-230ENST00000638016 GOLGA2Q08379 1002 aa22.89■■□□□ 1.25
PNKP-230ENST00000638016 RBM46Q8TBY0 533 aaKnown RBP22.89■■□□□ 1.25
PNKP-230ENST00000638016 MYD88Q99836 296 aa22.89■■□□□ 1.25
PNKP-230ENST00000638016 SPINK5Q9NQ38 1064 aaPredicted RBP22.89■■□□□ 1.25
PNKP-230ENST00000638016 IARSP41252 1262 aaKnown RBP22.88■■□□□ 1.25
PNKP-230ENST00000638016 TWISTNBQ3B726 338 aaPredicted RBP22.88■■□□□ 1.25
PNKP-230ENST00000638016 CCDC30Q5VVM6 783 aa22.88■■□□□ 1.25
PNKP-230ENST00000638016 IL16Q14005 1332 aa22.87■■□□□ 1.25
PNKP-230ENST00000638016 VEGFAP15692 232 aaPredicted RBP22.87■■□□□ 1.25
PNKP-230ENST00000638016 DPY19L2Q6NUT2 758 aa22.87■■□□□ 1.25
PNKP-230ENST00000638016 G2E3Q7L622 706 aa22.87■■□□□ 1.25
PNKP-230ENST00000638016 JARID2Q92833 1246 aaPredicted RBP22.87■■□□□ 1.25
PNKP-230ENST00000638016 PSMD1Q99460 953 aa22.86■■□□□ 1.25
PNKP-230ENST00000638016 HTRA3P83110 453 aa22.85■■□□□ 1.25
PNKP-230ENST00000638016 POTEIP0CG38 1075 aa22.84■■□□□ 1.25
PNKP-230ENST00000638016 POTEJP0CG39 1038 aa22.84■■□□□ 1.25
PNKP-230ENST00000638016 NCBP3Q53F19 620 aaKnown RBP22.84■■□□□ 1.25
PNKP-230ENST00000638016 MAP3K2Q9Y2U5 619 aa22.84■■□□□ 1.25
PNKP-230ENST00000638016 ATP6V0A2Q9Y487 856 aa22.84■■□□□ 1.25
PNKP-230ENST00000638016 TRIM28Q13263 835 aaKnown RBP22.83■■□□□ 1.25
PNKP-230ENST00000638016 CC2D2BQ6DHV5 1058 aa22.83■■□□□ 1.25
PNKP-230ENST00000638016 PI4KAP2A4QPH2 592 aa22.82■■□□□ 1.24
PNKP-230ENST00000638016 IRS4O14654 1257 aaPredicted RBP22.82■■□□□ 1.24
PNKP-230ENST00000638016 EXOSC9Q06265 439 aaKnown RBP22.82■■□□□ 1.24
PNKP-230ENST00000638016 GRAPQ13588 217 aa22.82■■□□□ 1.24
PNKP-230ENST00000638016 DDX46Q7L014 1031 aaKnown RBP22.82■■□□□ 1.24
PNKP-230ENST00000638016 WDR63Q8IWG1 891 aa22.82■■□□□ 1.24
PNKP-230ENST00000638016 PI4KAP1Q8N8J0 262 aa22.82■■□□□ 1.24
PNKP-230ENST00000638016 GRAPLQ8TC17 118 aaPredicted RBP22.82■■□□□ 1.24
PNKP-230ENST00000638016 METTL22Q9BUU2 404 aaPredicted RBP22.82■■□□□ 1.24
PNKP-230ENST00000638016 FZD9O00144 591 aa22.81■■□□□ 1.24
PNKP-230ENST00000638016 CELF1Q92879 486 aaKnown RBP22.81■■□□□ 1.24
PNKP-230ENST00000638016 STK31Q9BXU1 1019 aa22.81■■□□□ 1.24
PNKP-230ENST00000638016 DUOX1Q9NRD9 1551 aa22.8■■□□□ 1.24
PNKP-230ENST00000638016 LRRC37AA6NMS7 1700 aa22.8■■□□□ 1.24
PNKP-230ENST00000638016 SLC4A2P04920 1241 aa22.8■■□□□ 1.24
PNKP-230ENST00000638016 FSTL1Q12841 308 aa22.8■■□□□ 1.24
PNKP-230ENST00000638016 AOC3Q16853 763 aa22.8■■□□□ 1.24
PNKP-230ENST00000638016 LARGE2Q8N3Y3 721 aa22.8■■□□□ 1.24
PNKP-230ENST00000638016 ZBTB38Q8NAP3 1195 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms