RNA–Protein interactions for RNA: ENST00000637937.1

CTSD-214, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-214ENST00000637937 NLRP3Q96P20 1036 aa21.96■■□□□ 1.11
CTSD-214ENST00000637937 RRAGCQ9HB90 399 aa21.96■■□□□ 1.11
CTSD-214ENST00000637937 SLX4Q8IY92 1834 aa21.95■■□□□ 1.1
CTSD-214ENST00000637937 OLFM4Q6UX06 510 aa21.95■■□□□ 1.1
CTSD-214ENST00000637937 NLRP10Q86W26 655 aa21.95■■□□□ 1.1
CTSD-214ENST00000637937 WWC1Q8IX03 1113 aa21.95■■□□□ 1.1
CTSD-214ENST00000637937 SALL2Q9Y467 1007 aaPredicted RBP21.95■■□□□ 1.1
CTSD-214ENST00000637937 LTBP3Q9NS15 1303 aa21.95■■□□□ 1.1
CTSD-214ENST00000637937 TOMM70O94826 608 aa21.94■■□□□ 1.1
CTSD-214ENST00000637937 TSR2Q969E8 191 aaKnown RBP21.94■■□□□ 1.1
CTSD-214ENST00000637937 RBM17Q96I25 401 aaKnown RBP21.94■■□□□ 1.1
CTSD-214ENST00000637937 TRMT112Q9UI30 125 aaKnown RBP21.94■■□□□ 1.1
CTSD-214ENST00000637937 GLTPD2A6NH11 291 aa21.93■■□□□ 1.1
CTSD-214ENST00000637937 SBF1O95248 1867 aa21.93■■□□□ 1.1
CTSD-214ENST00000637937 HOXA10P31260 410 aaPredicted RBP21.93■■□□□ 1.1
CTSD-214ENST00000637937 RTKN2Q8IZC4 609 aa21.93■■□□□ 1.1
CTSD-214ENST00000637937 ZNF428Q96B54 188 aa21.93■■□□□ 1.1
CTSD-214ENST00000637937 CHMP4AQ9BY43 222 aa21.93■■□□□ 1.1
CTSD-214ENST00000637937 RIC1Q4ADV7 1423 aa21.92■■□□□ 1.1
CTSD-214ENST00000637937 RNF123Q5XPI4 1314 aa21.92■■□□□ 1.1
CTSD-214ENST00000637937 SLC10A5Q5PT55 438 aa21.92■■□□□ 1.1
CTSD-214ENST00000637937 DPY19L2Q6NUT2 758 aa21.92■■□□□ 1.1
CTSD-214ENST00000637937 C3orf67Q6ZVT6 689 aa21.92■■□□□ 1.1
CTSD-214ENST00000637937 FAM9BQ8IZU0 186 aa21.92■■□□□ 1.1
CTSD-214ENST00000637937 TNRC6CQ9HCJ0 1690 aaKnown RBP21.91■■□□□ 1.1
CTSD-214ENST00000637937 HCLS1P14317 486 aaPredicted RBP21.91■■□□□ 1.1
CTSD-214ENST00000637937 FKBP4Q02790 459 aaKnown RBP eCLIP21.91■■□□□ 1.1
CTSD-214ENST00000637937 GOLGA2Q08379 1002 aa21.91■■□□□ 1.1
CTSD-214ENST00000637937 CCDC30Q5VVM6 783 aa21.91■■□□□ 1.1
CTSD-214ENST00000637937 RIC3Q7Z5B4 369 aa21.91■■□□□ 1.1
CTSD-214ENST00000637937 PHAXQ9H814 394 aaKnown RBP21.91■■□□□ 1.1
CTSD-214ENST00000637937 SH3TC1Q8TE82 1336 aa21.9■■□□□ 1.1
CTSD-214ENST00000637937 ATP5J2-PTCD1G3V325 749 aa21.9■■□□□ 1.1
CTSD-214ENST00000637937 TCERG1O14776 1098 aaKnown RBP21.9■■□□□ 1.1
CTSD-214ENST00000637937 NCBP3Q53F19 620 aaKnown RBP21.9■■□□□ 1.1
CTSD-214ENST00000637937 SYNE4Q8N205 404 aa21.9■■□□□ 1.1
CTSD-214ENST00000637937 TSPYL6Q8N831 410 aa21.9■■□□□ 1.1
CTSD-214ENST00000637937 CRAMP1Q96RY5 1269 aa21.9■■□□□ 1.1
CTSD-214ENST00000637937 ZNF277Q9NRM2 450 aaPredicted RBP21.9■■□□□ 1.1
CTSD-214ENST00000637937 CACNA1SQ13698 1873 aa21.89■■□□□ 1.09
CTSD-214ENST00000637937 IL16Q14005 1332 aa21.88■■□□□ 1.09
CTSD-214ENST00000637937 PPEF1O14829 653 aaPredicted RBP21.88■■□□□ 1.09
CTSD-214ENST00000637937 HSPA6P17066 643 aa21.88■■□□□ 1.09
CTSD-214ENST00000637937 CC2D2BQ6DHV5 1058 aa21.88■■□□□ 1.09
CTSD-214ENST00000637937 ISCA1Q9BUE6 129 aa21.88■■□□□ 1.09
CTSD-214ENST00000637937 TMX4Q9H1E5 349 aaPredicted RBP21.88■■□□□ 1.09
CTSD-214ENST00000637937 FER1L6Q2WGJ9 1857 aa21.88■■□□□ 1.09
CTSD-214ENST00000637937 ARFGEF2Q9Y6D5 1785 aa21.87■■□□□ 1.09
CTSD-214ENST00000637937 VEGFAP15692 232 aaPredicted RBP21.87■■□□□ 1.09
CTSD-214ENST00000637937 RBM46Q8TBY0 533 aaKnown RBP21.87■■□□□ 1.09
CTSD-214ENST00000637937 CEP350Q5VT06 3117 aa21.86■■□□□ 1.09
CTSD-214ENST00000637937 FAM89AQ96GI7 184 aa21.86■■□□□ 1.09
CTSD-214ENST00000637937 DDX58O95786 925 aaKnown RBP21.85■■□□□ 1.09
CTSD-214ENST00000637937 TWISTNBQ3B726 338 aaPredicted RBP21.85■■□□□ 1.09
CTSD-214ENST00000637937 RTL5Q5HYW3 569 aaPredicted RBP21.85■■□□□ 1.09
CTSD-214ENST00000637937 STK31Q9BXU1 1019 aa21.85■■□□□ 1.09
CTSD-214ENST00000637937 ABCC4O15439 1325 aa21.84■■□□□ 1.09
CTSD-214ENST00000637937 IARSP41252 1262 aaKnown RBP21.84■■□□□ 1.09
CTSD-214ENST00000637937 GRIPAP1Q4V328 841 aa21.84■■□□□ 1.09
CTSD-214ENST00000637937 DDX46Q7L014 1031 aaKnown RBP21.84■■□□□ 1.09
CTSD-214ENST00000637937 WDR63Q8IWG1 891 aa21.84■■□□□ 1.09
CTSD-214ENST00000637937 PSMD1Q99460 953 aa21.84■■□□□ 1.09
CTSD-214ENST00000637937 MYD88Q99836 296 aa21.84■■□□□ 1.09
CTSD-214ENST00000637937 CCDC88AQ3V6T2 1871 aa21.83■■□□□ 1.09
CTSD-214ENST00000637937 TIAM2Q8IVF5 1701 aa21.83■■□□□ 1.09
CTSD-214ENST00000637937 DDNO94850 711 aaPredicted RBP21.83■■□□□ 1.09
CTSD-214ENST00000637937 TRIM28Q13263 835 aaKnown RBP21.83■■□□□ 1.09
CTSD-214ENST00000637937 ANKRD36CQ5JPF3 1778 aa21.82■■□□□ 1.08
CTSD-214ENST00000637937 FANCIQ9NVI1 1328 aa21.81■■□□□ 1.08
CTSD-214ENST00000637937 BBOX1O75936 387 aa21.81■■□□□ 1.08
CTSD-214ENST00000637937 FSTL1Q12841 308 aa21.81■■□□□ 1.08
CTSD-214ENST00000637937 SLC51AQ86UW1 340 aa21.81■■□□□ 1.08
CTSD-214ENST00000637937 JDP2Q8WYK2 163 aa21.81■■□□□ 1.08
CTSD-214ENST00000637937 ATP6V0A2Q9Y487 856 aa21.81■■□□□ 1.08
CTSD-214ENST00000637937 SMC1BQ8NDV3 1235 aa21.8■■□□□ 1.08
CTSD-214ENST00000637937 METTL22Q9BUU2 404 aaPredicted RBP21.8■■□□□ 1.08
CTSD-214ENST00000637937 MAP3K2Q9Y2U5 619 aa21.8■■□□□ 1.08
CTSD-214ENST00000637937 POTECB2RU33 542 aa21.79■■□□□ 1.08
CTSD-214ENST00000637937 IRS4O14654 1257 aaPredicted RBP21.79■■□□□ 1.08
CTSD-214ENST00000637937 SLC4A2P04920 1241 aa21.79■■□□□ 1.08
CTSD-214ENST00000637937 GRAPQ13588 217 aa21.79■■□□□ 1.08
CTSD-214ENST00000637937 ZBTB38Q8NAP3 1195 aaPredicted RBP21.79■■□□□ 1.08
CTSD-214ENST00000637937 GRAPLQ8TC17 118 aaPredicted RBP21.79■■□□□ 1.08
CTSD-214ENST00000637937 PI4KAP2A4QPH2 592 aa21.78■■□□□ 1.08
CTSD-214ENST00000637937 APLP1P51693 650 aa21.78■■□□□ 1.08
CTSD-214ENST00000637937 KSR2Q6VAB6 950 aa21.78■■□□□ 1.08
CTSD-214ENST00000637937 SP8Q8IXZ3 490 aa21.78■■□□□ 1.08
CTSD-214ENST00000637937 LARGE2Q8N3Y3 721 aa21.78■■□□□ 1.08
CTSD-214ENST00000637937 PI4KAP1Q8N8J0 262 aa21.78■■□□□ 1.08
CTSD-214ENST00000637937 CCDC191Q8NCU4 936 aa21.78■■□□□ 1.08
CTSD-214ENST00000637937 CWC25Q9NXE8 425 aaPredicted RBP21.78■■□□□ 1.08
CTSD-214ENST00000637937 SNED1Q8TER0 1413 aa21.78■■□□□ 1.08
CTSD-214ENST00000637937 ZNF541Q9H0D2 1346 aa21.78■■□□□ 1.08
CTSD-214ENST00000637937 EXOSC9Q06265 439 aaKnown RBP21.77■■□□□ 1.08
CTSD-214ENST00000637937 SF3B3Q15393 1217 aaKnown RBP21.77■■□□□ 1.08
CTSD-214ENST00000637937 DICER1Q9UPY3 1922 aaKnown RBP21.76■■□□□ 1.07
CTSD-214ENST00000637937 FZD9O00144 591 aa21.76■■□□□ 1.07
CTSD-214ENST00000637937 HSP90B1P14625 803 aaKnown RBP21.76■■□□□ 1.07
CTSD-214ENST00000637937 DPP8Q6V1X1 898 aaPredicted RBP21.76■■□□□ 1.07
CTSD-214ENST00000637937 G2E3Q7L622 706 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms