RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 RNMTO43148 476 aaKnown RBP17.4■□□□□ 0.38
CLN6-215ENST00000636674 IFIT2P09913 472 aaKnown RBP17.4■□□□□ 0.38
CLN6-215ENST00000636674 ST3GAL1Q11201 340 aa17.4■□□□□ 0.38
CLN6-215ENST00000636674 ADCK5Q3MIX3 580 aa17.4■□□□□ 0.38
CLN6-215ENST00000636674 PIBF1Q8WXW3 757 aa17.4■□□□□ 0.38
CLN6-215ENST00000636674 GIGYF1O75420 1035 aaPredicted RBP17.39■□□□□ 0.37
CLN6-215ENST00000636674 PRPF40BQ6NWY9 871 aaKnown RBP17.39■□□□□ 0.37
CLN6-215ENST00000636674 CCDC83Q8IWF9 413 aa17.39■□□□□ 0.37
CLN6-215ENST00000636674 C9orf78Q9NZ63 289 aaPredicted RBP17.39■□□□□ 0.37
CLN6-215ENST00000636674 USP25Q9UHP3 1055 aa17.39■□□□□ 0.37
CLN6-215ENST00000636674 FIBPO43427 364 aa17.38■□□□□ 0.37
CLN6-215ENST00000636674 ANXA1P04083 346 aa17.38■□□□□ 0.37
CLN6-215ENST00000636674 ZKSCAN1P17029 563 aaPredicted RBP17.38■□□□□ 0.37
CLN6-215ENST00000636674 MTERF4Q7Z6M4 381 aaKnown RBP17.38■□□□□ 0.37
CLN6-215ENST00000636674 MAP4K1Q92918 833 aa17.38■□□□□ 0.37
CLN6-215ENST00000636674 MST1RQ04912 1400 aa17.38■□□□□ 0.37
CLN6-215ENST00000636674 HCLS1P14317 486 aaPredicted RBP17.38■□□□□ 0.37
CLN6-215ENST00000636674 CPA1P15085 419 aa17.38■□□□□ 0.37
CLN6-215ENST00000636674 LINS1Q8NG48 757 aa17.38■□□□□ 0.37
CLN6-215ENST00000636674 ALDH8A1Q9H2A2 487 aaPredicted RBP17.38■□□□□ 0.37
CLN6-215ENST00000636674 KDM4AO75164 1064 aa17.37■□□□□ 0.37
CLN6-215ENST00000636674 ADCY5O95622 1261 aa17.37■□□□□ 0.37
CLN6-215ENST00000636674 CREB3L3Q68CJ9 461 aa17.37■□□□□ 0.37
CLN6-215ENST00000636674 RBM8AQ9Y5S9 174 aaKnown RBP17.37■□□□□ 0.37
CLN6-215ENST00000636674 MED23Q9ULK4 1368 aa17.37■□□□□ 0.37
CLN6-215ENST00000636674 GRM8O00222 908 aa17.37■□□□□ 0.37
CLN6-215ENST00000636674 ME3Q16798 604 aa17.37■□□□□ 0.37
CLN6-215ENST00000636674 AACSQ86V21 672 aa17.37■□□□□ 0.37
CLN6-215ENST00000636674 ELP1O95163 1332 aa17.36■□□□□ 0.37
CLN6-215ENST00000636674 PSMA5P28066 241 aa17.36■□□□□ 0.37
CLN6-215ENST00000636674 DNM1Q05193 864 aaKnown RBP17.36■□□□□ 0.37
CLN6-215ENST00000636674 MPRIPQ6WCQ1 1025 aa17.36■□□□□ 0.37
CLN6-215ENST00000636674 LARP6Q9BRS8 491 aaKnown RBP17.36■□□□□ 0.37
CLN6-215ENST00000636674 PA2G4Q9UQ80 394 aaKnown RBP17.36■□□□□ 0.37
CLN6-215ENST00000636674 PROSER3Q2NL68 480 aa17.35■□□□□ 0.37
CLN6-215ENST00000636674 C1orf141Q5JVX7 400 aa17.35■□□□□ 0.37
CLN6-215ENST00000636674 KAZALD1Q96I82 304 aa17.35■□□□□ 0.37
CLN6-215ENST00000636674 SPTLC3Q9NUV7 552 aa17.35■□□□□ 0.37
CLN6-215ENST00000636674 PHLPP1O60346 1717 aa17.35■□□□□ 0.37
CLN6-215ENST00000636674 SASH1O94885 1247 aa17.35■□□□□ 0.37
CLN6-215ENST00000636674 PRIMPOLQ96LW4 560 aa17.35■□□□□ 0.37
CLN6-215ENST00000636674 C5P01031 1676 aa17.34■□□□□ 0.37
CLN6-215ENST00000636674 SLC27A2O14975 620 aa17.34■□□□□ 0.37
CLN6-215ENST00000636674 DDX58O95786 925 aaKnown RBP17.34■□□□□ 0.37
CLN6-215ENST00000636674 PDCP20941 246 aa17.34■□□□□ 0.37
CLN6-215ENST00000636674 NMIQ13287 307 aaPredicted RBP17.34■□□□□ 0.37
CLN6-215ENST00000636674 ANKRD1Q15327 319 aa17.34■□□□□ 0.37
CLN6-215ENST00000636674 AHDC1Q5TGY3 1603 aaPredicted RBP17.34■□□□□ 0.37
CLN6-215ENST00000636674 LRRC59Q96AG4 307 aaKnown RBP17.34■□□□□ 0.37
CLN6-215ENST00000636674 SUCLG2Q96I99 432 aa17.34■□□□□ 0.37
CLN6-215ENST00000636674 TRPM3Q9HCF6 1732 aaPredicted RBP17.34■□□□□ 0.37
CLN6-215ENST00000636674 CWF19L2Q2TBE0 894 aaKnown RBP17.33■□□□□ 0.37
CLN6-215ENST00000636674 TSGA10IPQ3SY00 556 aa17.33■□□□□ 0.37
CLN6-215ENST00000636674 ARHGEF25Q86VW2 580 aa17.33■□□□□ 0.37
CLN6-215ENST00000636674 MYRIPQ8NFW9 859 aa17.33■□□□□ 0.37
CLN6-215ENST00000636674 EAF2Q96CJ1 260 aaPredicted RBP17.33■□□□□ 0.37
CLN6-215ENST00000636674 DDX21Q9NR30 783 aaKnown RBP eCLIP17.33■□□□□ 0.37
CLN6-215ENST00000636674 TPCN1Q9ULQ1 816 aa17.33■□□□□ 0.37
CLN6-215ENST00000636674 SCN11AQ9UI33 1791 aa17.33■□□□□ 0.36
CLN6-215ENST00000636674 RFX7Q2KHR2 1363 aa17.33■□□□□ 0.36
CLN6-215ENST00000636674 TPM3P06753 285 aa17.33■□□□□ 0.36
CLN6-215ENST00000636674 RNF20Q5VTR2 975 aa17.33■□□□□ 0.36
CLN6-215ENST00000636674 HMG20BQ9P0W2 317 aa17.33■□□□□ 0.36
CLN6-215ENST00000636674 KRT85P78386 507 aa17.32■□□□□ 0.36
CLN6-215ENST00000636674 G3BP1Q13283 466 aaKnown RBP eCLIP17.32■□□□□ 0.36
CLN6-215ENST00000636674 NOLC1Q14978 699 aaKnown RBP eCLIP17.32■□□□□ 0.36
CLN6-215ENST00000636674 GIMAP6Q6P9H5 292 aa17.32■□□□□ 0.36
CLN6-215ENST00000636674 FAM227BQ96M60 508 aa17.32■□□□□ 0.36
CLN6-215ENST00000636674 BICC1Q9H694 974 aaKnown RBP17.32■□□□□ 0.36
CLN6-215ENST00000636674 NHSL1Q5SYE7 1610 aa17.32■□□□□ 0.36
CLN6-215ENST00000636674 VPS37CA5D8V6 355 aaPredicted RBP17.31■□□□□ 0.36
CLN6-215ENST00000636674 HMGN5P82970 282 aaKnown RBP17.31■□□□□ 0.36
CLN6-215ENST00000636674 C1orf167Q5SNV9 1468 aa17.31■□□□□ 0.36
CLN6-215ENST00000636674 COL16A1Q07092 1604 aaPredicted RBP17.31■□□□□ 0.36
CLN6-215ENST00000636674 CCDC192P0DO97 292 aa17.31■□□□□ 0.36
CLN6-215ENST00000636674 GTF2F1P35269 517 aaKnown RBP eCLIP17.31■□□□□ 0.362e-6■■■□□ 14.6
CLN6-215ENST00000636674 RBM10P98175 930 aaKnown RBP17.31■□□□□ 0.36
CLN6-215ENST00000636674 PSME1Q06323 249 aa17.31■□□□□ 0.36
CLN6-215ENST00000636674 FAM13BQ9NYF5 915 aa17.31■□□□□ 0.36
CLN6-215ENST00000636674 ABCC6O95255 1503 aa17.3■□□□□ 0.36
CLN6-215ENST00000636674 A0A0D9SFI3 127 aa17.3■□□□□ 0.36
CLN6-215ENST00000636674 RPS6KB1P23443 525 aa17.3■□□□□ 0.36
CLN6-215ENST00000636674 KCNJ4P48050 445 aa17.3■□□□□ 0.36
CLN6-215ENST00000636674 LARP1BQ659C4 914 aaKnown RBP17.3■□□□□ 0.36
CLN6-215ENST00000636674 BLOC1S2Q6QNY1 142 aa17.3■□□□□ 0.36
CLN6-215ENST00000636674 BRINP3Q76B58 766 aa17.3■□□□□ 0.36
CLN6-215ENST00000636674 TTC6Q86TZ1 520 aa17.3■□□□□ 0.36
CLN6-215ENST00000636674 PDIA6Q15084 440 aa17.3■□□□□ 0.36
CLN6-215ENST00000636674 VSIG10Q8N0Z9 540 aa17.3■□□□□ 0.36
CLN6-215ENST00000636674 NECAB1Q8N987 351 aa17.3■□□□□ 0.36
CLN6-215ENST00000636674 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.3■□□□□ 0.36
CLN6-215ENST00000636674 COL15A1P39059 1388 aa17.29■□□□□ 0.36
CLN6-215ENST00000636674 GCP02774 474 aa17.29■□□□□ 0.36
CLN6-215ENST00000636674 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
CLN6-215ENST00000636674 CDC37L1Q7L3B6 337 aa17.29■□□□□ 0.36
CLN6-215ENST00000636674 TTC12Q9H892 705 aaPredicted RBP17.29■□□□□ 0.36
CLN6-215ENST00000636674 IGKV5-2P06315 115 aa17.28■□□□□ 0.36
CLN6-215ENST00000636674 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
CLN6-215ENST00000636674 FSD1Q9BTV5 496 aa17.28■□□□□ 0.36
CLN6-215ENST00000636674 SCAND2PQ9GZW5 306 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms