RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 CALM1P0DP23 149 aa18.56■□□□□ 0.56
CLN5-208ENST00000636183 CALM2P0DP24 149 aa18.56■□□□□ 0.56
CLN5-208ENST00000636183 CALM3P0DP25 149 aa18.56■□□□□ 0.56
CLN5-208ENST00000636183 LARP6Q9BRS8 491 aaKnown RBP18.56■□□□□ 0.56
CLN5-208ENST00000636183 TMCO5BA8MYB1 307 aa18.56■□□□□ 0.56
CLN5-208ENST00000636183 CYP7A1P22680 504 aa18.56■□□□□ 0.56
CLN5-208ENST00000636183 PANK2Q9BZ23 570 aa18.56■□□□□ 0.56
CLN5-208ENST00000636183 NESP48681 1621 aa18.56■□□□□ 0.56
CLN5-208ENST00000636183 ERLIN1O75477 346 aa18.56■□□□□ 0.56
CLN5-208ENST00000636183 SH3BP5O60239 455 aa18.55■□□□□ 0.56
CLN5-208ENST00000636183 LUZP1Q86V48 1076 aa18.55■□□□□ 0.56
CLN5-208ENST00000636183 NSFL1CQ9UNZ2 370 aaKnown RBP18.55■□□□□ 0.56
CLN5-208ENST00000636183 B4DLN1 442 aa18.55■□□□□ 0.56
CLN5-208ENST00000636183 MRPL12P52815 198 aaKnown RBP18.55■□□□□ 0.56
CLN5-208ENST00000636183 SMARCC2Q8TAQ2 1214 aa18.55■□□□□ 0.56
CLN5-208ENST00000636183 CCDC102AQ96A19 550 aa18.55■□□□□ 0.56
CLN5-208ENST00000636183 SIRT1Q96EB6 747 aa18.55■□□□□ 0.56
CLN5-208ENST00000636183 NUP88Q99567 741 aaPredicted RBP18.55■□□□□ 0.56
CLN5-208ENST00000636183 DDX23Q9BUQ8 820 aaKnown RBP18.55■□□□□ 0.56
CLN5-208ENST00000636183 INCENPQ9NQS7 918 aa18.55■□□□□ 0.56
CLN5-208ENST00000636183 MICU3Q86XE3 530 aa18.55■□□□□ 0.56
CLN5-208ENST00000636183 HFM1A2PYH4 1435 aa18.54■□□□□ 0.56
CLN5-208ENST00000636183 FERP16591 822 aa18.54■□□□□ 0.56
CLN5-208ENST00000636183 CFTRP13569 1480 aa18.54■□□□□ 0.56
CLN5-208ENST00000636183 IFFO1Q0D2I5 559 aa18.54■□□□□ 0.56
CLN5-208ENST00000636183 HEATR3Q7Z4Q2 680 aa18.54■□□□□ 0.56
CLN5-208ENST00000636183 RPAP2Q8IXW5 612 aaPredicted RBP18.54■□□□□ 0.56
CLN5-208ENST00000636183 SMARCC1Q92922 1105 aaPredicted RBP18.54■□□□□ 0.56
CLN5-208ENST00000636183 AMPD3Q01432 767 aa18.54■□□□□ 0.56
CLN5-208ENST00000636183 LRRC45Q96CN5 670 aa18.54■□□□□ 0.56
CLN5-208ENST00000636183 GINS2Q9Y248 185 aa18.54■□□□□ 0.56
CLN5-208ENST00000636183 GIGYF2Q6Y7W6 1299 aaKnown RBP18.53■□□□□ 0.56
CLN5-208ENST00000636183 WASLO00401 505 aaPredicted RBP18.53■□□□□ 0.56
CLN5-208ENST00000636183 SLC26A6Q9BXS9 759 aa18.53■□□□□ 0.56
CLN5-208ENST00000636183 PDE3AQ14432 1141 aa18.53■□□□□ 0.56
CLN5-208ENST00000636183 CNNM3Q8NE01 707 aa18.53■□□□□ 0.56
CLN5-208ENST00000636183 ZGPATQ8N5A5 531 aaKnown RBP18.52■□□□□ 0.56
CLN5-208ENST00000636183 CEP63Q96MT8 703 aa18.52■□□□□ 0.56
CLN5-208ENST00000636183 ANXA1P04083 346 aa18.52■□□□□ 0.56
CLN5-208ENST00000636183 SNRPA1P09661 255 aaKnown RBP18.52■□□□□ 0.56
CLN5-208ENST00000636183 MRE11P49959 708 aa18.52■□□□□ 0.56
CLN5-208ENST00000636183 NYXQ9GZU5 481 aa18.52■□□□□ 0.56
CLN5-208ENST00000636183 CSPG5O95196 566 aa18.52■□□□□ 0.56
CLN5-208ENST00000636183 ACTN2P35609 894 aa18.52■□□□□ 0.56
CLN5-208ENST00000636183 IFT140Q96RY7 1462 aa18.52■□□□□ 0.55
CLN5-208ENST00000636183 ZBTB24O43167 697 aaPredicted RBP18.51■□□□□ 0.55
CLN5-208ENST00000636183 GJC1P36383 396 aa18.51■□□□□ 0.55
CLN5-208ENST00000636183 KIF21BO75037 1637 aa18.51■□□□□ 0.55
CLN5-208ENST00000636183 TNNI2P48788 182 aa18.51■□□□□ 0.55
CLN5-208ENST00000636183 PICK1Q9NRD5 415 aa18.51■□□□□ 0.55
CLN5-208ENST00000636183 SLC4A4Q9Y6R1 1079 aa18.51■□□□□ 0.55
CLN5-208ENST00000636183 EIF3JO75822 258 aaKnown RBP18.51■□□□□ 0.55
CLN5-208ENST00000636183 TERF1P54274 439 aa18.51■□□□□ 0.55
CLN5-208ENST00000636183 PKD2L1Q9P0L9 805 aa18.51■□□□□ 0.55
CLN5-208ENST00000636183 UBA7P41226 1012 aa18.5■□□□□ 0.55
CLN5-208ENST00000636183 NDC80O14777 642 aa18.5■□□□□ 0.55
CLN5-208ENST00000636183 SLC39A6Q13433 755 aa18.5■□□□□ 0.55
CLN5-208ENST00000636183 ERMNQ8TAM6 284 aa18.5■□□□□ 0.55
CLN5-208ENST00000636183 IVNS1ABPQ9Y6Y0 642 aa18.5■□□□□ 0.55
CLN5-208ENST00000636183 IFIT1BQ5T764 474 aaKnown RBP18.5■□□□□ 0.55
CLN5-208ENST00000636183 GNPATO15228 680 aa18.49■□□□□ 0.55
CLN5-208ENST00000636183 EIF6P56537 245 aaKnown RBP18.49■□□□□ 0.55
CLN5-208ENST00000636183 TPTE2Q6XPS3 522 aa18.49■□□□□ 0.55
CLN5-208ENST00000636183 HMGB1P09429 215 aaKnown RBP18.49■□□□□ 0.55
CLN5-208ENST00000636183 BACH1O14867 736 aa18.49■□□□□ 0.55
CLN5-208ENST00000636183 NAA16Q6N069 864 aaPredicted RBP18.49■□□□□ 0.55
CLN5-208ENST00000636183 IARSP41252 1262 aaKnown RBP18.49■□□□□ 0.55
CLN5-208ENST00000636183 DZIP3Q86Y13 1208 aaKnown RBP18.49■□□□□ 0.55
CLN5-208ENST00000636183 USP16Q9Y5T5 823 aa18.49■□□□□ 0.55
CLN5-208ENST00000636183 RAB3IL1Q8TBN0 382 aa18.49■□□□□ 0.55
CLN5-208ENST00000636183 LRRC9Q6ZRR7 1453 aa18.49■□□□□ 0.55
CLN5-208ENST00000636183 METAP2P50579 478 aaKnown RBP eCLIP18.48■□□□□ 0.55
CLN5-208ENST00000636183 TCIRG1Q13488 830 aa18.48■□□□□ 0.55
CLN5-208ENST00000636183 ISM2Q6H9L7 571 aa18.48■□□□□ 0.55
CLN5-208ENST00000636183 MRVI1Q9Y6F6 885 aa18.48■□□□□ 0.55
CLN5-208ENST00000636183 TMOD4Q9NZQ9 345 aa18.48■□□□□ 0.55
CLN5-208ENST00000636183 MYCP01106 439 aaPredicted RBP18.48■□□□□ 0.55
CLN5-208ENST00000636183 TRAPPC3LQ5T215 181 aa18.48■□□□□ 0.55
CLN5-208ENST00000636183 MAP3K11Q16584 847 aa18.48■□□□□ 0.55
CLN5-208ENST00000636183 EYA3Q99504 573 aa18.47■□□□□ 0.55
CLN5-208ENST00000636183 NCKAP5LQ9HCH0 1330 aa18.47■□□□□ 0.55
CLN5-208ENST00000636183 UQCRFS1P1P0C7P4 283 aa18.47■□□□□ 0.55
CLN5-208ENST00000636183 NPHP3Q7Z494 1330 aa18.47■□□□□ 0.55
CLN5-208ENST00000636183 ATXN8OSP0DMR3 200 aa18.47■□□□□ 0.55
CLN5-208ENST00000636183 KCNA4P22459 653 aa18.47■□□□□ 0.55
CLN5-208ENST00000636183 RBM17Q96I25 401 aaKnown RBP18.47■□□□□ 0.55
CLN5-208ENST00000636183 USO1O60763 962 aaKnown RBP18.46■□□□□ 0.55
CLN5-208ENST00000636183 RAB3GAP1Q15042 981 aa18.46■□□□□ 0.55
CLN5-208ENST00000636183 PPP1R14CQ8TAE6 165 aa18.46■□□□□ 0.55
CLN5-208ENST00000636183 HARSP12081 509 aaKnown RBP18.46■□□□□ 0.55
CLN5-208ENST00000636183 ANKRD13DQ6ZTN6 518 aa18.46■□□□□ 0.55
CLN5-208ENST00000636183 ZYXQ15942 572 aaKnown RBP18.46■□□□□ 0.54
CLN5-208ENST00000636183 TBC1D5Q92609 795 aa18.46■□□□□ 0.54
CLN5-208ENST00000636183 IMPG2Q9BZV3 1241 aa18.46■□□□□ 0.54
CLN5-208ENST00000636183 EXOC1Q9NV70 894 aa18.46■□□□□ 0.54
CLN5-208ENST00000636183 CASKIN1Q8WXD9 1431 aa18.45■□□□□ 0.54
CLN5-208ENST00000636183 KRT13P13646 458 aa18.45■□□□□ 0.54
CLN5-208ENST00000636183 WTAPQ15007 396 aa18.45■□□□□ 0.54
CLN5-208ENST00000636183 ALS2CR12Q96Q35 445 aa18.45■□□□□ 0.54
CLN5-208ENST00000636183 KIAA1107Q9UPP5 1409 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms