RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 RFX7Q2KHR2 1363 aa14.97□□□□□ -0.01
PTPN11-205ENST00000635625 NEURL1BA8MQ27 555 aa14.97□□□□□ -0.01
PTPN11-205ENST00000635625 XRCC6P12956 609 aaKnown RBP eCLIP14.97□□□□□ -0.01
PTPN11-205ENST00000635625 CWF19L2Q2TBE0 894 aaKnown RBP14.97□□□□□ -0.01
PTPN11-205ENST00000635625 LSG1Q9H089 658 aaKnown RBP14.97□□□□□ -0.01
PTPN11-205ENST00000635625 GRPEL1Q9HAV7 217 aa14.97□□□□□ -0.01
PTPN11-205ENST00000635625 PALD1Q9ULE6 856 aa14.97□□□□□ -0.01
PTPN11-205ENST00000635625 PCDH11XQ9BZA7 1347 aa14.96□□□□□ -0.01
PTPN11-205ENST00000635625 PCDH11YQ9BZA8 1340 aa14.96□□□□□ -0.01
PTPN11-205ENST00000635625 GCKRQ14397 625 aa14.96□□□□□ -0.01
PTPN11-205ENST00000635625 NFATC2IPQ8NCF5 419 aa14.96□□□□□ -0.01
PTPN11-205ENST00000635625 SUCLG2Q96I99 432 aa14.96□□□□□ -0.01
PTPN11-205ENST00000635625 BICC1Q9H694 974 aaKnown RBP14.96□□□□□ -0.02
PTPN11-205ENST00000635625 SNRKQ9NRH2 765 aa14.96□□□□□ -0.02
PTPN11-205ENST00000635625 DDX49Q9Y6V7 483 aaKnown RBP14.96□□□□□ -0.02
PTPN11-205ENST00000635625 NUP188Q5SRE5 1749 aa14.95□□□□□ -0.02
PTPN11-205ENST00000635625 WDR17Q8IZU2 1322 aa14.95□□□□□ -0.02
PTPN11-205ENST00000635625 PRAMEF22A3QJZ6 481 aa14.95□□□□□ -0.02
PTPN11-205ENST00000635625 IGKV5-2P06315 115 aa14.95□□□□□ -0.02
PTPN11-205ENST00000635625 ANKRD13DQ6ZTN6 518 aa14.95□□□□□ -0.02
PTPN11-205ENST00000635625 BRINP3Q76B58 766 aa14.95□□□□□ -0.02
PTPN11-205ENST00000635625 TICAM2Q86XR7 235 aa14.95□□□□□ -0.02
PTPN11-205ENST00000635625 XAGE3Q8WTP9 111 aa14.95□□□□□ -0.02
PTPN11-205ENST00000635625 KCNB2Q92953 911 aa14.95□□□□□ -0.02
PTPN11-205ENST00000635625 ZNF496Q96IT1 587 aaPredicted RBP14.95□□□□□ -0.02
PTPN11-205ENST00000635625 TM6SF1Q9BZW5 370 aa14.95□□□□□ -0.02
PTPN11-205ENST00000635625 ERVV-2B6SEH9 535 aa14.94□□□□□ -0.02
PTPN11-205ENST00000635625 CYP27B1O15528 508 aa14.94□□□□□ -0.02
PTPN11-205ENST00000635625 BRD1O95696 1058 aa14.94□□□□□ -0.02
PTPN11-205ENST00000635625 MBD3O95983 291 aa14.94□□□□□ -0.02
PTPN11-205ENST00000635625 CABP4P57796 275 aa14.94□□□□□ -0.02
PTPN11-205ENST00000635625 LRP10Q7Z4F1 713 aa14.94□□□□□ -0.02
PTPN11-205ENST00000635625 AACSQ86V21 672 aa14.94□□□□□ -0.02
PTPN11-205ENST00000635625 ZGPATQ8N5A5 531 aaKnown RBP14.94□□□□□ -0.02
PTPN11-205ENST00000635625 KAZALD1Q96I82 304 aa14.94□□□□□ -0.02
PTPN11-205ENST00000635625 COPRSQ9NQ92 184 aa14.94□□□□□ -0.02
PTPN11-205ENST00000635625 PDIA4P13667 645 aaKnown RBP14.93□□□□□ -0.02
PTPN11-205ENST00000635625 ZNF445P59923 1031 aa14.93□□□□□ -0.02
PTPN11-205ENST00000635625 SLC39A6Q13433 755 aa14.93□□□□□ -0.02
PTPN11-205ENST00000635625 MCTP1Q6DN14 999 aa14.93□□□□□ -0.02
PTPN11-205ENST00000635625 COPS6Q7L5N1 327 aa14.93□□□□□ -0.02
PTPN11-205ENST00000635625 DDX17Q92841 729 aaKnown RBP14.93□□□□□ -0.02
PTPN11-205ENST00000635625 LMBRD1Q9NUN5 540 aa14.93□□□□□ -0.02
PTPN11-205ENST00000635625 COL5A2P05997 1499 aaPredicted RBP14.93□□□□□ -0.02
PTPN11-205ENST00000635625 PHLPP1O60346 1717 aa14.93□□□□□ -0.02
PTPN11-205ENST00000635625 AIMP1Q12904 312 aaKnown RBP14.93□□□□□ -0.02
PTPN11-205ENST00000635625 RABL6Q3YEC7 729 aaPredicted RBP14.93□□□□□ -0.02
PTPN11-205ENST00000635625 PLBD2Q8NHP8 589 aa14.93□□□□□ -0.02
PTPN11-205ENST00000635625 SNX14Q9Y5W7 946 aa14.93□□□□□ -0.02
PTPN11-205ENST00000635625 SOS2Q07890 1332 aaPredicted RBP14.92□□□□□ -0.02
PTPN11-205ENST00000635625 WDR33Q9C0J8 1336 aaKnown RBP14.92□□□□□ -0.02
PTPN11-205ENST00000635625 MYD88Q99836 296 aa14.92□□□□□ -0.02
PTPN11-205ENST00000635625 SHANK3Q9BYB0 1731 aa14.92□□□□□ -0.02
PTPN11-205ENST00000635625 NHSL1Q5SYE7 1610 aa14.92□□□□□ -0.02
PTPN11-205ENST00000635625 SASH1O94885 1247 aa14.91□□□□□ -0.02
PTPN11-205ENST00000635625 NKX1-1Q15270 411 aaPredicted RBP14.91□□□□□ -0.02
PTPN11-205ENST00000635625 ZSCAN31Q96LW9 406 aaPredicted RBP14.91□□□□□ -0.02
PTPN11-205ENST00000635625 TTC14Q96N46 770 aa14.91□□□□□ -0.02
PTPN11-205ENST00000635625 ZDHHC9Q9Y397 364 aa14.91□□□□□ -0.02
PTPN11-205ENST00000635625 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.91□□□□□ -0.02
PTPN11-205ENST00000635625 KCPQ6ZWJ8 1503 aa14.91□□□□□ -0.02
PTPN11-205ENST00000635625 MYL6BP14649 208 aa14.9□□□□□ -0.02
PTPN11-205ENST00000635625 EVX2Q03828 476 aa14.9□□□□□ -0.02
PTPN11-205ENST00000635625 CWC27Q6UX04 472 aaKnown RBP14.9□□□□□ -0.02
PTPN11-205ENST00000635625 SH2B1Q9NRF2 756 aaPredicted RBP14.9□□□□□ -0.02
PTPN11-205ENST00000635625 LIMCH1Q9UPQ0 1083 aa14.9□□□□□ -0.02
PTPN11-205ENST00000635625 PA2G4Q9UQ80 394 aaKnown RBP14.9□□□□□ -0.02
PTPN11-205ENST00000635625 TNS2Q63HR2 1409 aa14.9□□□□□ -0.02
PTPN11-205ENST00000635625 CCDC171Q6TFL3 1326 aa14.9□□□□□ -0.02
PTPN11-205ENST00000635625 JCADQ9P266 1359 aa14.9□□□□□ -0.02
PTPN11-205ENST00000635625 MAP4K4O95819 1239 aaPredicted RBP14.9□□□□□ -0.02
PTPN11-205ENST00000635625 ZKSCAN1P17029 563 aaPredicted RBP14.9□□□□□ -0.02
PTPN11-205ENST00000635625 CHRNA2Q15822 529 aa14.9□□□□□ -0.02
PTPN11-205ENST00000635625 VPS53Q5VIR6 699 aa14.9□□□□□ -0.02
PTPN11-205ENST00000635625 ILDR2Q71H61 639 aa14.9□□□□□ -0.02
PTPN11-205ENST00000635625 ZCRB1Q8TBF4 217 aaKnown RBP14.9□□□□□ -0.02
PTPN11-205ENST00000635625 IL25Q9H293 177 aa14.9□□□□□ -0.02
PTPN11-205ENST00000635625 PRDM11Q9NQV5 511 aa14.9□□□□□ -0.02
PTPN11-205ENST00000635625 COL16A1Q07092 1604 aaPredicted RBP14.9□□□□□ -0.02
PTPN11-205ENST00000635625 TJP1Q07157 1748 aa14.89□□□□□ -0.03
PTPN11-205ENST00000635625 PKP1Q13835 747 aa14.89□□□□□ -0.03
PTPN11-205ENST00000635625 RNF20Q5VTR2 975 aa14.89□□□□□ -0.03
PTPN11-205ENST00000635625 CABLES1Q8TDN4 633 aa14.89□□□□□ -0.03
PTPN11-205ENST00000635625 EAF2Q96CJ1 260 aaPredicted RBP14.89□□□□□ -0.03
PTPN11-205ENST00000635625 CARD10Q9BWT7 1032 aa14.89□□□□□ -0.03
PTPN11-205ENST00000635625 UPF3BQ9BZI7 483 aaKnown RBP14.89□□□□□ -0.03
PTPN11-205ENST00000635625 SPEF2Q9C093 1822 aa14.88□□□□□ -0.03
PTPN11-205ENST00000635625 PSMA5P28066 241 aa14.88□□□□□ -0.03
PTPN11-205ENST00000635625 ANP32BQ92688 251 aaKnown RBP14.88□□□□□ -0.03
PTPN11-205ENST00000635625 HMG20BQ9P0W2 317 aa14.88□□□□□ -0.03
PTPN11-205ENST00000635625 MED23Q9ULK4 1368 aa14.88□□□□□ -0.03
PTPN11-205ENST00000635625 ATP5JP18859 108 aa14.88□□□□□ -0.03
PTPN11-205ENST00000635625 SYAP1Q96A49 352 aaPredicted RBP14.88□□□□□ -0.03
PTPN11-205ENST00000635625 ZSWIM6Q9HCJ5 1215 aa14.88□□□□□ -0.03
PTPN11-205ENST00000635625 ATP6V1DQ9Y5K8 247 aa14.88□□□□□ -0.03
PTPN11-205ENST00000635625 USP16Q9Y5T5 823 aa14.88□□□□□ -0.03
PTPN11-205ENST00000635625 CYP46A1Q9Y6A2 500 aa14.88□□□□□ -0.03
PTPN11-205ENST00000635625 RFX5P48382 616 aaPredicted RBP14.87□□□□□ -0.03
PTPN11-205ENST00000635625 ZNF579Q8NAF0 562 aaKnown RBP14.87□□□□□ -0.03
PTPN11-205ENST00000635625 ALDH8A1Q9H2A2 487 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms