RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 CCDC173Q0VFZ6 552 aa15.75■□□□□ 0.11
BRF1-222ENST00000635152 CCDC83Q8IWF9 413 aa15.75■□□□□ 0.11
BRF1-222ENST00000635152 NDUFB9Q9Y6M9 179 aa15.75■□□□□ 0.11
BRF1-222ENST00000635152 DCAF5Q96JK2 942 aa15.74■□□□□ 0.11
BRF1-222ENST00000635152 CCDC9Q9Y3X0 531 aaKnown RBP15.74■□□□□ 0.11
BRF1-222ENST00000635152 COL9A3Q14050 684 aaPredicted RBP15.74■□□□□ 0.11
BRF1-222ENST00000635152 RNF214Q8ND24 703 aa15.74■□□□□ 0.11
BRF1-222ENST00000635152 PDRG1Q9NUG6 133 aa15.74■□□□□ 0.11
BRF1-222ENST00000635152 SMC3Q9UQE7 1217 aa15.74■□□□□ 0.11
BRF1-222ENST00000635152 RBM8AQ9Y5S9 174 aaKnown RBP15.74■□□□□ 0.11
BRF1-222ENST00000635152 CCDC171Q6TFL3 1326 aa15.74■□□□□ 0.11
BRF1-222ENST00000635152 MST1RQ04912 1400 aa15.74■□□□□ 0.11
BRF1-222ENST00000635152 A0A0D9SFI3 127 aa15.73■□□□□ 0.11
BRF1-222ENST00000635152 USP48Q86UV5 1035 aa15.73■□□□□ 0.11
BRF1-222ENST00000635152 FMNL2Q96PY5 1086 aa15.73■□□□□ 0.11
BRF1-222ENST00000635152 MBD3O95983 291 aa15.73■□□□□ 0.11
BRF1-222ENST00000635152 TCEANC2Q96MN5 208 aa15.73■□□□□ 0.11
BRF1-222ENST00000635152 CYP46A1Q9Y6A2 500 aa15.73■□□□□ 0.11
BRF1-222ENST00000635152 ZKSCAN1P17029 563 aaPredicted RBP15.73■□□□□ 0.11
BRF1-222ENST00000635152 SYT1P21579 422 aa15.73■□□□□ 0.11
BRF1-222ENST00000635152 RPAP1Q9BWH6 1393 aaPredicted RBP15.73■□□□□ 0.11
BRF1-222ENST00000635152 NECTIN1Q15223 517 aa15.72■□□□□ 0.11
BRF1-222ENST00000635152 LRSAM1Q6UWE0 723 aa15.72■□□□□ 0.11
BRF1-222ENST00000635152 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.72■□□□□ 0.11
BRF1-222ENST00000635152 A0A087WZG4 1122 aa15.72■□□□□ 0.11
BRF1-222ENST00000635152 HSPA2P54652 639 aa15.72■□□□□ 0.11
BRF1-222ENST00000635152 CREB3L3Q68CJ9 461 aa15.72■□□□□ 0.11
BRF1-222ENST00000635152 LRP10Q7Z4F1 713 aa15.72■□□□□ 0.11
BRF1-222ENST00000635152 NECAB1Q8N987 351 aa15.72■□□□□ 0.11
BRF1-222ENST00000635152 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.72■□□□□ 0.115e-8■■■■□ 20
BRF1-222ENST00000635152 CNPY2Q9Y2B0 182 aa15.72■□□□□ 0.11
BRF1-222ENST00000635152 CHMP3Q9Y3E7 222 aa15.72■□□□□ 0.11
BRF1-222ENST00000635152 STX6O43752 255 aa15.71■□□□□ 0.11
BRF1-222ENST00000635152 TFCP2Q12800 502 aa15.71■□□□□ 0.11
BRF1-222ENST00000635152 PPP1R9BQ96SB3 815 aa15.71■□□□□ 0.11
BRF1-222ENST00000635152 TAF6LQ9Y6J9 622 aa15.71■□□□□ 0.11
BRF1-222ENST00000635152 CHGBP05060 677 aa15.7■□□□□ 0.1
BRF1-222ENST00000635152 ZSCAN22P10073 491 aaPredicted RBP15.7■□□□□ 0.1
BRF1-222ENST00000635152 GJB2P29033 226 aa15.7■□□□□ 0.1
BRF1-222ENST00000635152 ZNF589Q86UQ0 364 aaPredicted RBP15.7■□□□□ 0.1
BRF1-222ENST00000635152 CADPS2Q86UW7 1296 aa15.7■□□□□ 0.1
BRF1-222ENST00000635152 NAP1L5Q96NT1 182 aaPredicted RBP15.7■□□□□ 0.1
BRF1-222ENST00000635152 ZSWIM6Q9HCJ5 1215 aa15.7■□□□□ 0.1
BRF1-222ENST00000635152 CAMTA1Q9Y6Y1 1673 aa15.7■□□□□ 0.1
BRF1-222ENST00000635152 PTPN12Q05209 780 aaKnown RBP15.7■□□□□ 0.1
BRF1-222ENST00000635152 VPS53Q5VIR6 699 aa15.7■□□□□ 0.1
BRF1-222ENST00000635152 DBNLQ9UJU6 430 aaKnown RBP15.7■□□□□ 0.1
BRF1-222ENST00000635152 SIPA1L3O60292 1781 aaPredicted RBP15.7■□□□□ 0.1
BRF1-222ENST00000635152 MAP4K1Q92918 833 aa15.69■□□□□ 0.1
BRF1-222ENST00000635152 DNAJC2Q99543 621 aaKnown RBP15.69■□□□□ 0.1
BRF1-222ENST00000635152 FIBPO43427 364 aa15.69■□□□□ 0.1
BRF1-222ENST00000635152 ME3Q16798 604 aa15.69■□□□□ 0.1
BRF1-222ENST00000635152 C5P01031 1676 aa15.69■□□□□ 0.1
BRF1-222ENST00000635152 KIF1AQ12756 1690 aa15.69■□□□□ 0.1
BRF1-222ENST00000635152 HIP1O00291 1037 aa15.69■□□□□ 0.1
BRF1-222ENST00000635152 SLC27A2O14975 620 aa15.69■□□□□ 0.1
BRF1-222ENST00000635152 TOM1L2Q6ZVM7 507 aa15.69■□□□□ 0.1
BRF1-222ENST00000635152 ALS2Q96Q42 1657 aa15.68■□□□□ 0.1
BRF1-222ENST00000635152 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
BRF1-222ENST00000635152 VPS37CA5D8V6 355 aaPredicted RBP15.68■□□□□ 0.1
BRF1-222ENST00000635152 TNNI3KQ59H18 835 aa15.68■□□□□ 0.1
BRF1-222ENST00000635152 LMBR1LQ6UX01 489 aa15.68■□□□□ 0.1
BRF1-222ENST00000635152 COPRSQ9NQ92 184 aa15.68■□□□□ 0.1
BRF1-222ENST00000635152 PRDM11Q9NQV5 511 aa15.68■□□□□ 0.1
BRF1-222ENST00000635152 TPCN1Q9ULQ1 816 aa15.68■□□□□ 0.1
BRF1-222ENST00000635152 FPGT-TNNI3KV9GXZ4 949 aa15.68■□□□□ 0.1
BRF1-222ENST00000635152 F13A1P00488 732 aa15.67■□□□□ 0.1
BRF1-222ENST00000635152 RFX5P48382 616 aaPredicted RBP15.67■□□□□ 0.1
BRF1-222ENST00000635152 DBNDD2Q9BQY9 259 aa15.67■□□□□ 0.1
BRF1-222ENST00000635152 TNS3Q68CZ2 1445 aa15.67■□□□□ 0.1
BRF1-222ENST00000635152 ST3GAL1Q11201 340 aa15.67■□□□□ 0.1
BRF1-222ENST00000635152 TTLL7Q6ZT98 887 aa15.67■□□□□ 0.1
BRF1-222ENST00000635152 TM6SF1Q9BZW5 370 aa15.67■□□□□ 0.1
BRF1-222ENST00000635152 NBPF26B4DH59 902 aa15.66■□□□□ 0.1
BRF1-222ENST00000635152 NBPF14Q5TI25 921 aa15.66■□□□□ 0.1
BRF1-222ENST00000635152 NBPF10Q6P3W6 841 aaKnown RBP15.66■□□□□ 0.1
BRF1-222ENST00000635152 NBPF15Q8N660 670 aa15.66■□□□□ 0.1
BRF1-222ENST00000635152 SYAP1Q96A49 352 aaPredicted RBP15.66■□□□□ 0.1
BRF1-222ENST00000635152 ADAMTS7Q9UKP4 1686 aa15.66■□□□□ 0.1
BRF1-222ENST00000635152 A1BGP04217 495 aa15.66■□□□□ 0.1
BRF1-222ENST00000635152 SEC62Q99442 399 aaKnown RBP15.66■□□□□ 0.1
BRF1-222ENST00000635152 CRYBG1Q9Y4K1 1723 aa15.66■□□□□ 0.1
BRF1-222ENST00000635152 BLOC1S2Q6QNY1 142 aa15.65■□□□□ 0.1
BRF1-222ENST00000635152 CCDC129Q6ZRS4 1044 aa15.65■□□□□ 0.1
BRF1-222ENST00000635152 DDX46Q7L014 1031 aaKnown RBP15.65■□□□□ 0.1
BRF1-222ENST00000635152 PLBD2Q8NHP8 589 aa15.65■□□□□ 0.1
BRF1-222ENST00000635152 KCNB2Q92953 911 aa15.65■□□□□ 0.1
BRF1-222ENST00000635152 ZBTB3Q9H5J0 574 aa15.65■□□□□ 0.1
BRF1-222ENST00000635152 ZNF330Q9Y3S2 320 aaPredicted RBP15.65■□□□□ 0.1
BRF1-222ENST00000635152 SCN11AQ9UI33 1791 aa15.65■□□□□ 0.1
BRF1-222ENST00000635152 DNM1Q05193 864 aaKnown RBP15.65■□□□□ 0.1
BRF1-222ENST00000635152 STK3Q13188 491 aa15.65■□□□□ 0.1
BRF1-222ENST00000635152 RNF20Q5VTR2 975 aa15.65■□□□□ 0.1
BRF1-222ENST00000635152 ZSCAN31Q96LW9 406 aaPredicted RBP15.65■□□□□ 0.1
BRF1-222ENST00000635152 NEUROD6Q96NK8 337 aa15.65■□□□□ 0.1
BRF1-222ENST00000635152 SH2B1Q9NRF2 756 aaPredicted RBP15.65■□□□□ 0.1
BRF1-222ENST00000635152 TCHHQ07283 1943 aa15.65■□□□□ 0.1
BRF1-222ENST00000635152 PSMA5P28066 241 aa15.65■□□□□ 0.1
BRF1-222ENST00000635152 TSPY26PQ9H489 355 aa15.65■□□□□ 0.1
BRF1-222ENST00000635152 RABL6Q3YEC7 729 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms