RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 CLEC4GQ6UXB4 293 aa17.89■□□□□ 0.45
PHACTR4-209ENST00000633371 NPM2Q86SE8 214 aaKnown RBP17.89■□□□□ 0.45
PHACTR4-209ENST00000633371 CWC25Q9NXE8 425 aaPredicted RBP17.89■□□□□ 0.45
PHACTR4-209ENST00000633371 PNPLA7Q6ZV29 1317 aa17.89■□□□□ 0.45
PHACTR4-209ENST00000633371 HSP90AB3PQ58FF7 597 aa17.88■□□□□ 0.45
PHACTR4-209ENST00000633371 TBC1D9BQ66K14 1250 aa17.88■□□□□ 0.45
PHACTR4-209ENST00000633371 SYNE4Q8N205 404 aa17.88■□□□□ 0.45
PHACTR4-209ENST00000633371 SUCLG2Q96I99 432 aa17.88■□□□□ 0.45
PHACTR4-209ENST00000633371 LRRFIP2Q9Y608 721 aaKnown RBP17.88■□□□□ 0.45
PHACTR4-209ENST00000633371 DDX60Q8IY21 1712 aaKnown RBP17.88■□□□□ 0.45
PHACTR4-209ENST00000633371 MYH3P11055 1940 aa17.88■□□□□ 0.45
PHACTR4-209ENST00000633371 UBTFL1P0CB47 393 aaPredicted RBP17.87■□□□□ 0.45
PHACTR4-209ENST00000633371 GYS1P13807 737 aa17.87■□□□□ 0.45
PHACTR4-209ENST00000633371 HMGB2P26583 209 aaKnown RBP17.87■□□□□ 0.45
PHACTR4-209ENST00000633371 RFC4P35249 363 aa17.87■□□□□ 0.45
PHACTR4-209ENST00000633371 SLC15A2Q16348 729 aa17.87■□□□□ 0.45
PHACTR4-209ENST00000633371 EPHA10Q5JZY3 1008 aa17.87■□□□□ 0.45
PHACTR4-209ENST00000633371 SUSD4Q5VX71 490 aa17.87■□□□□ 0.45
PHACTR4-209ENST00000633371 CEP85Q6P2H3 762 aa17.87■□□□□ 0.45
PHACTR4-209ENST00000633371 CHMP4BQ9H444 224 aaKnown RBP17.87■□□□□ 0.45
PHACTR4-209ENST00000633371 C9orf78Q9NZ63 289 aaPredicted RBP17.87■□□□□ 0.45
PHACTR4-209ENST00000633371 TFCP2L1Q9NZI6 479 aa17.87■□□□□ 0.45
PHACTR4-209ENST00000633371 ZPR1O75312 459 aa17.86■□□□□ 0.45
PHACTR4-209ENST00000633371 GNAI2P04899 355 aa17.86■□□□□ 0.45
PHACTR4-209ENST00000633371 UBE3BQ7Z3V4 1068 aa17.86■□□□□ 0.45
PHACTR4-209ENST00000633371 ANKRD44Q8N8A2 993 aa17.86■□□□□ 0.45
PHACTR4-209ENST00000633371 KDM2BQ8NHM5 1336 aa17.86■□□□□ 0.45
PHACTR4-209ENST00000633371 LAMB2P55268 1798 aa17.86■□□□□ 0.45
PHACTR4-209ENST00000633371 PCCAP05165 728 aaPredicted RBP17.85■□□□□ 0.45
PHACTR4-209ENST00000633371 NIP7Q9Y221 180 aaKnown RBP eCLIP17.85■□□□□ 0.45
PHACTR4-209ENST00000633371 NTSR2O95665 410 aa17.84■□□□□ 0.45
PHACTR4-209ENST00000633371 FOXO4P98177 505 aa17.84■□□□□ 0.45
PHACTR4-209ENST00000633371 FAM89AQ96GI7 184 aa17.84■□□□□ 0.45
PHACTR4-209ENST00000633371 CCDC136Q96JN2 1154 aa17.84■□□□□ 0.45
PHACTR4-209ENST00000633371 ZNF652Q9Y2D9 606 aa17.84■□□□□ 0.45
PHACTR4-209ENST00000633371 PNMA6EA0A0J9YXQ4 647 aa17.83■□□□□ 0.44
PHACTR4-209ENST00000633371 TM4SF1P30408 202 aa17.83■□□□□ 0.44
PHACTR4-209ENST00000633371 ATP8B2P98198 1209 aa17.83■□□□□ 0.44
PHACTR4-209ENST00000633371 HDAC1Q13547 482 aaPredicted RBP17.83■□□□□ 0.44
PHACTR4-209ENST00000633371 NFIXQ14938 502 aa17.83■□□□□ 0.44
PHACTR4-209ENST00000633371 RTL5Q5HYW3 569 aaPredicted RBP17.83■□□□□ 0.44
PHACTR4-209ENST00000633371 ZBTB38Q8NAP3 1195 aaPredicted RBP17.83■□□□□ 0.44
PHACTR4-209ENST00000633371 PDGFDQ9GZP0 370 aaPredicted RBP17.83■□□□□ 0.44
PHACTR4-209ENST00000633371 STK32BQ9NY57 414 aa17.83■□□□□ 0.44
PHACTR4-209ENST00000633371 PARP10Q53GL7 1025 aa17.82■□□□□ 0.44
PHACTR4-209ENST00000633371 BICDL1Q6ZP65 573 aa17.82■□□□□ 0.44
PHACTR4-209ENST00000633371 RPAP2Q8IXW5 612 aaPredicted RBP17.82■□□□□ 0.44
PHACTR4-209ENST00000633371 BICC1Q9H694 974 aaKnown RBP17.82■□□□□ 0.44
PHACTR4-209ENST00000633371 NRXN2Q9P2S2 1712 aa17.81■□□□□ 0.44
PHACTR4-209ENST00000633371 CDHR2Q9BYE9 1310 aa17.81■□□□□ 0.44
PHACTR4-209ENST00000633371 FAM177BA6PVY3 158 aa17.81■□□□□ 0.44
PHACTR4-209ENST00000633371 MTX1Q13505 466 aa17.81■□□□□ 0.44
PHACTR4-209ENST00000633371 RABL6Q3YEC7 729 aaPredicted RBP17.81■□□□□ 0.44
PHACTR4-209ENST00000633371 FLAD1Q8NFF5 587 aa17.81■□□□□ 0.44
PHACTR4-209ENST00000633371 PLA2G12BQ9BX93 195 aa17.81■□□□□ 0.44
PHACTR4-209ENST00000633371 DDR1Q08345 913 aa17.8■□□□□ 0.44
PHACTR4-209ENST00000633371 POLA2Q14181 598 aa17.8■□□□□ 0.44
PHACTR4-209ENST00000633371 PPP1R42Q7Z4L9 355 aa17.8■□□□□ 0.44
PHACTR4-209ENST00000633371 UTP14AQ9BVJ6 771 aaKnown RBP17.8■□□□□ 0.44
PHACTR4-209ENST00000633371 TRMT112Q9UI30 125 aaKnown RBP17.8■□□□□ 0.44
PHACTR4-209ENST00000633371 NUTM1Q86Y26 1132 aa17.79■□□□□ 0.44
PHACTR4-209ENST00000633371 SSH3Q8TE77 659 aa17.79■□□□□ 0.44
PHACTR4-209ENST00000633371 TAF1P21675 1872 aa17.79■□□□□ 0.44
PHACTR4-209ENST00000633371 ANKRD31Q8N7Z5 1873 aa17.78■□□□□ 0.44
PHACTR4-209ENST00000633371 TNRC6CQ9HCJ0 1690 aaKnown RBP17.78■□□□□ 0.44
PHACTR4-209ENST00000633371 ERFEQ4G0M1 354 aa17.78■□□□□ 0.44
PHACTR4-209ENST00000633371 SETDB2Q96T68 719 aa17.78■□□□□ 0.44
PHACTR4-209ENST00000633371 RWDD1Q9H446 243 aaPredicted RBP17.78■□□□□ 0.44
PHACTR4-209ENST00000633371 ABCC12Q96J65 1359 aa17.78■□□□□ 0.44
PHACTR4-209ENST00000633371 SH3TC1Q8TE82 1336 aa17.77■□□□□ 0.44
PHACTR4-209ENST00000633371 IRS4O14654 1257 aaPredicted RBP17.77■□□□□ 0.44
PHACTR4-209ENST00000633371 CSF1RP07333 972 aa17.77■□□□□ 0.44
PHACTR4-209ENST00000633371 HCLS1P14317 486 aaPredicted RBP17.77■□□□□ 0.44
PHACTR4-209ENST00000633371 RFX5P48382 616 aaPredicted RBP17.77■□□□□ 0.44
PHACTR4-209ENST00000633371 COL4A1P02462 1669 aa17.77■□□□□ 0.43
PHACTR4-209ENST00000633371 POLRMTO00411 1230 aaKnown RBP17.76■□□□□ 0.43
PHACTR4-209ENST00000633371 MSH5O43196 834 aa17.76■□□□□ 0.43
PHACTR4-209ENST00000633371 SLC10A5Q5PT55 438 aa17.76■□□□□ 0.43
PHACTR4-209ENST00000633371 LMBR1LQ6UX01 489 aa17.76■□□□□ 0.43
PHACTR4-209ENST00000633371 C3orf67Q6ZVT6 689 aa17.76■□□□□ 0.43
PHACTR4-209ENST00000633371 SMC5Q8IY18 1101 aa17.76■□□□□ 0.43
PHACTR4-209ENST00000633371 DCTPP1Q9H773 170 aa17.76■□□□□ 0.43
PHACTR4-209ENST00000633371 CARMIL3Q8ND23 1372 aa17.76■□□□□ 0.43
PHACTR4-209ENST00000633371 MSL1Q68DK7 614 aa17.75■□□□□ 0.43
PHACTR4-209ENST00000633371 CENPQQ7L2Z9 268 aaPredicted RBP17.75■□□□□ 0.43
PHACTR4-209ENST00000633371 CCDC24Q8N4L8 307 aa17.75■□□□□ 0.43
PHACTR4-209ENST00000633371 TTLL11Q8NHH1 800 aa17.75■□□□□ 0.43
PHACTR4-209ENST00000633371 HDAC5Q9UQL6 1122 aa17.75■□□□□ 0.43
PHACTR4-209ENST00000633371 SRGAP3O43295 1099 aa17.74■□□□□ 0.43
PHACTR4-209ENST00000633371 PDE8AO60658 829 aa17.74■□□□□ 0.43
PHACTR4-209ENST00000633371 SKAP1Q86WV1 359 aa17.74■□□□□ 0.43
PHACTR4-209ENST00000633371 NLGN1Q8N2Q7 840 aa17.74■□□□□ 0.43
PHACTR4-209ENST00000633371 SPEF2Q9C093 1822 aa17.73■□□□□ 0.43
PHACTR4-209ENST00000633371 SERPINB2P05120 415 aa17.73■□□□□ 0.43
PHACTR4-209ENST00000633371 CTSWP56202 376 aa17.73■□□□□ 0.43
PHACTR4-209ENST00000633371 PRR5LQ6MZQ0 368 aa17.73■□□□□ 0.43
PHACTR4-209ENST00000633371 NBPF5PQ86XG9 351 aaPredicted RBP17.73■□□□□ 0.43
PHACTR4-209ENST00000633371 PA2G4Q9UQ80 394 aaKnown RBP17.73■□□□□ 0.43
PHACTR4-209ENST00000633371 KLHDC4Q8TBB5 520 aa17.72■□□□□ 0.43
PHACTR4-209ENST00000633371 NYXQ9GZU5 481 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms