RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 NCOA7Q8NI08 942 aa16.36■□□□□ 0.21
UBE3A-220ENST00000630424 TSPY3P0CV98 308 aa16.35■□□□□ 0.21
UBE3A-220ENST00000630424 TSPY8P0CW00 308 aa16.35■□□□□ 0.21
UBE3A-220ENST00000630424 MCM4P33991 863 aa16.35■□□□□ 0.21
UBE3A-220ENST00000630424 C16orf71Q8IYS4 520 aaPredicted RBP16.35■□□□□ 0.21
UBE3A-220ENST00000630424 DZIP3Q86Y13 1208 aaKnown RBP16.35■□□□□ 0.21
UBE3A-220ENST00000630424 SYCP3Q8IZU3 236 aa16.35■□□□□ 0.21
UBE3A-220ENST00000630424 UHRF1BP1LA0JNW5 1464 aa16.35■□□□□ 0.21
UBE3A-220ENST00000630424 SFPQP23246 707 aaKnown RBP eCLIP16.35■□□□□ 0.21
UBE3A-220ENST00000630424 CA8P35219 290 aa16.35■□□□□ 0.21
UBE3A-220ENST00000630424 METAP2P50579 478 aaKnown RBP eCLIP16.35■□□□□ 0.21
UBE3A-220ENST00000630424 DNA2P51530 1060 aa16.35■□□□□ 0.21
UBE3A-220ENST00000630424 ZGPATQ8N5A5 531 aaKnown RBP16.35■□□□□ 0.21
UBE3A-220ENST00000630424 SLC26A6Q9BXS9 759 aa16.35■□□□□ 0.21
UBE3A-220ENST00000630424 ANO10Q9NW15 660 aa16.35■□□□□ 0.21
UBE3A-220ENST00000630424 NCOA1Q15788 1441 aa16.35■□□□□ 0.21
UBE3A-220ENST00000630424 SYCE3A1L190 88 aa16.35■□□□□ 0.21
UBE3A-220ENST00000630424 GBP2P32456 591 aaPredicted RBP16.35■□□□□ 0.21
UBE3A-220ENST00000630424 NAA16Q6N069 864 aaPredicted RBP16.34■□□□□ 0.21
UBE3A-220ENST00000630424 KIF14Q15058 1648 aa16.34■□□□□ 0.21
UBE3A-220ENST00000630424 UTP14AQ9BVJ6 771 aaKnown RBP16.34■□□□□ 0.21
UBE3A-220ENST00000630424 TFIP11Q9UBB9 837 aaKnown RBP16.34■□□□□ 0.21
UBE3A-220ENST00000630424 NFATC2IPQ8NCF5 419 aa16.34■□□□□ 0.21
UBE3A-220ENST00000630424 NSD2O96028 1365 aa16.33■□□□□ 0.21
UBE3A-220ENST00000630424 CCDC40Q4G0X9 1142 aa16.33■□□□□ 0.21
UBE3A-220ENST00000630424 CTNNBL1Q8WYA6 563 aaPredicted RBP16.33■□□□□ 0.21
UBE3A-220ENST00000630424 MTIF2P46199 727 aaKnown RBP16.33■□□□□ 0.2
UBE3A-220ENST00000630424 NEK1Q96PY6 1258 aa16.33■□□□□ 0.2
UBE3A-220ENST00000630424 SCAF11Q99590 1463 aaKnown RBP16.33■□□□□ 0.2
UBE3A-220ENST00000630424 RHPN1Q8TCX5 695 aa16.33■□□□□ 0.2
UBE3A-220ENST00000630424 NBPF7P0C2Y1 421 aaPredicted RBP16.33■□□□□ 0.2
UBE3A-220ENST00000630424 AMPD3Q01432 767 aa16.33■□□□□ 0.2
UBE3A-220ENST00000630424 STXBP4Q6ZWJ1 553 aa16.33■□□□□ 0.2
UBE3A-220ENST00000630424 WTAPQ15007 396 aa16.32■□□□□ 0.2
UBE3A-220ENST00000630424 FSIP1Q8NA03 581 aa16.32■□□□□ 0.2
UBE3A-220ENST00000630424 GRPEL1Q9HAV7 217 aa16.32■□□□□ 0.2
UBE3A-220ENST00000630424 SLC4A4Q9Y6R1 1079 aa16.32■□□□□ 0.2
UBE3A-220ENST00000630424 GSTTP1A0A1W2PQM5 241 aa16.32■□□□□ 0.2
UBE3A-220ENST00000630424 AKAP4Q5JQC9 854 aa16.32■□□□□ 0.2
UBE3A-220ENST00000630424 CPLX3Q8WVH0 158 aa16.32■□□□□ 0.2
UBE3A-220ENST00000630424 NKTRP30414 1462 aaKnown RBP16.32■□□□□ 0.2
UBE3A-220ENST00000630424 LMTK3Q96Q04 1460 aa16.32■□□□□ 0.2
UBE3A-220ENST00000630424 ZNF804AQ7Z570 1209 aa16.32■□□□□ 0.2
UBE3A-220ENST00000630424 BICD1Q96G01 975 aa16.32■□□□□ 0.2
UBE3A-220ENST00000630424 NYXQ9GZU5 481 aa16.32■□□□□ 0.2
UBE3A-220ENST00000630424 PUF60Q9UHX1 559 aaKnown RBP16.32■□□□□ 0.2
UBE3A-220ENST00000630424 TNNT1P13805 278 aa16.32■□□□□ 0.2
UBE3A-220ENST00000630424 PRKCSHP14314 528 aaPredicted RBP16.32■□□□□ 0.2
UBE3A-220ENST00000630424 CWC15Q9P013 229 aaKnown RBP16.32■□□□□ 0.2
UBE3A-220ENST00000630424 LEKR1Q6ZMV7 388 aa16.31■□□□□ 0.2
UBE3A-220ENST00000630424 NCKAP5LQ9HCH0 1330 aa16.31■□□□□ 0.2
UBE3A-220ENST00000630424 CTNNA2P26232 953 aa16.31■□□□□ 0.2
UBE3A-220ENST00000630424 TRAF1Q13077 416 aa16.31■□□□□ 0.2
UBE3A-220ENST00000630424 SKAP1Q86WV1 359 aa16.31■□□□□ 0.2
UBE3A-220ENST00000630424 HELBQ8NG08 1087 aaPredicted RBP16.31■□□□□ 0.2
UBE3A-220ENST00000630424 ESR2Q92731 530 aa16.31■□□□□ 0.2
UBE3A-220ENST00000630424 GRM8O00222 908 aa16.31■□□□□ 0.2
UBE3A-220ENST00000630424 BIN1O00499 593 aa16.31■□□□□ 0.2
UBE3A-220ENST00000630424 RIMBP2O15034 1052 aa16.31■□□□□ 0.2
UBE3A-220ENST00000630424 PLS1Q14651 629 aa16.31■□□□□ 0.2
UBE3A-220ENST00000630424 MCM5P33992 734 aa16.3■□□□□ 0.2
UBE3A-220ENST00000630424 SLC9C2Q5TAH2 1124 aa16.3■□□□□ 0.2
UBE3A-220ENST00000630424 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.3■□□□□ 0.2
UBE3A-220ENST00000630424 TBCAO75347 108 aaKnown RBP16.3■□□□□ 0.2
UBE3A-220ENST00000630424 TOP1P11387 765 aaKnown RBP16.3■□□□□ 0.2
UBE3A-220ENST00000630424 CCDC148Q8NFR7 591 aa16.3■□□□□ 0.2
UBE3A-220ENST00000630424 GCP02774 474 aa16.3■□□□□ 0.2
UBE3A-220ENST00000630424 ZFYP08048 801 aaPredicted RBP16.3■□□□□ 0.2
UBE3A-220ENST00000630424 BRF1Q92994 677 aa16.3■□□□□ 0.2
UBE3A-220ENST00000630424 FERMT2Q96AC1 680 aa16.3■□□□□ 0.2
UBE3A-220ENST00000630424 MEIS3Q99687 375 aa16.3■□□□□ 0.2
UBE3A-220ENST00000630424 CCDC174Q6PII3 467 aa16.29■□□□□ 0.2
UBE3A-220ENST00000630424 ANKRD36BQ8N2N9 1353 aa16.29■□□□□ 0.2
UBE3A-220ENST00000630424 KLF18A0A0U1RQI7 1052 aa16.29■□□□□ 0.2
UBE3A-220ENST00000630424 EIF3JO75822 258 aaKnown RBP16.29■□□□□ 0.2
UBE3A-220ENST00000630424 KSR2Q6VAB6 950 aa16.29■□□□□ 0.2
UBE3A-220ENST00000630424 TTC16Q8NEE8 873 aa16.29■□□□□ 0.2
UBE3A-220ENST00000630424 NUP88Q99567 741 aaPredicted RBP16.29■□□□□ 0.2
UBE3A-220ENST00000630424 BTG4Q9NY30 223 aa16.29■□□□□ 0.2
UBE3A-220ENST00000630424 WDR97A6NE52 1622 aa16.29■□□□□ 0.2
UBE3A-220ENST00000630424 PRC1O43663 620 aa16.29■□□□□ 0.2
UBE3A-220ENST00000630424 IL15P40933 162 aaPredicted RBP16.29■□□□□ 0.2
UBE3A-220ENST00000630424 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
UBE3A-220ENST00000630424 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
UBE3A-220ENST00000630424 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
UBE3A-220ENST00000630424 GNPATO15228 680 aa16.29■□□□□ 0.2
UBE3A-220ENST00000630424 IFIT1BQ5T764 474 aaKnown RBP16.29■□□□□ 0.2
UBE3A-220ENST00000630424 HOOK3Q86VS8 718 aa16.28■□□□□ 0.2
UBE3A-220ENST00000630424 ERMNQ8TAM6 284 aa16.28■□□□□ 0.2
UBE3A-220ENST00000630424 KRT23Q9C075 422 aa16.28■□□□□ 0.2
UBE3A-220ENST00000630424 ZBTB43O43298 467 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 MAP3K9P80192 1104 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 LUZP1Q86V48 1076 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 KDM5BQ9UGL1 1544 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 KCNA6P17658 529 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 GJB2P29033 226 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 PPP4R3BQ5MIZ7 849 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 MTERF4Q7Z6M4 381 aaKnown RBP16.27■□□□□ 0.2
UBE3A-220ENST00000630424 LRRC2Q9BYS8 371 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 CCDC113Q9H0I3 377 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms