RNA–Protein interactions for RNA: ENST00000629650.2

PPM1D-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 5 BASIC

Gene PPM1D, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-204ENST00000629650 TRAPPC3LQ5T215 181 aa24.73■■□□□ 1.55
PPM1D-204ENST00000629650 UTYO14607 1347 aa24.72■■□□□ 1.55
PPM1D-204ENST00000629650 ADRA2BP18089 450 aa24.72■■□□□ 1.55
PPM1D-204ENST00000629650 ARHGEF1Q92888 912 aaKnown RBP24.72■■□□□ 1.55
PPM1D-204ENST00000629650 NARFQ9UHQ1 456 aa24.72■■□□□ 1.55
PPM1D-204ENST00000629650 ZNF652Q9Y2D9 606 aa24.72■■□□□ 1.55
PPM1D-204ENST00000629650 MSH5O43196 834 aa24.71■■□□□ 1.55
PPM1D-204ENST00000629650 TRIM28Q13263 835 aaKnown RBP24.71■■□□□ 1.55
PPM1D-204ENST00000629650 COL23A1Q86Y22 540 aaPredicted RBP24.71■■□□□ 1.55
PPM1D-204ENST00000629650 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.71■■□□□ 1.55
PPM1D-204ENST00000629650 ZPR1O75312 459 aa24.71■■□□□ 1.55
PPM1D-204ENST00000629650 GPTP24298 496 aa24.71■■□□□ 1.55
PPM1D-204ENST00000629650 SSFA2P28290 1259 aa24.71■■□□□ 1.55
PPM1D-204ENST00000629650 SGIP1Q9BQI5 828 aa24.71■■□□□ 1.55
PPM1D-204ENST00000629650 HDAC5Q9UQL6 1122 aa24.71■■□□□ 1.55
PPM1D-204ENST00000629650 LRRFIP2Q9Y608 721 aaKnown RBP24.71■■□□□ 1.55
PPM1D-204ENST00000629650 RGL2O15211 777 aa24.7■■□□□ 1.54
PPM1D-204ENST00000629650 RFC4P35249 363 aa24.7■■□□□ 1.54
PPM1D-204ENST00000629650 CLEC4GQ6UXB4 293 aa24.7■■□□□ 1.54
PPM1D-204ENST00000629650 SLC16A10Q8TF71 515 aa24.7■■□□□ 1.54
PPM1D-204ENST00000629650 USPL1Q5W0Q7 1092 aa24.69■■□□□ 1.54
PPM1D-204ENST00000629650 RPAP2Q8IXW5 612 aaPredicted RBP24.69■■□□□ 1.54
PPM1D-204ENST00000629650 ZNF34Q8IZ26 560 aa24.69■■□□□ 1.54
PPM1D-204ENST00000629650 RWDD1Q9H446 243 aaPredicted RBP24.69■■□□□ 1.54
PPM1D-204ENST00000629650 IGHDP01880 384 aa24.68■■□□□ 1.54
PPM1D-204ENST00000629650 CEP85Q6P2H3 762 aa24.68■■□□□ 1.54
PPM1D-204ENST00000629650 UBE3BQ7Z3V4 1068 aa24.68■■□□□ 1.54
PPM1D-204ENST00000629650 NLRP10Q86W26 655 aa24.68■■□□□ 1.54
PPM1D-204ENST00000629650 SRP68Q9UHB9 627 aaKnown RBP24.68■■□□□ 1.54
PPM1D-204ENST00000629650 USP42Q9H9J4 1324 aaKnown RBP24.67■■□□□ 1.54
PPM1D-204ENST00000629650 HDAC1Q13547 482 aaPredicted RBP24.67■■□□□ 1.54
PPM1D-204ENST00000629650 ANKRD44Q8N8A2 993 aa24.67■■□□□ 1.54
PPM1D-204ENST00000629650 H7C1W4 665 aa24.66■■□□□ 1.54
PPM1D-204ENST00000629650 UBN2Q6ZU65 1347 aa24.66■■□□□ 1.54
PPM1D-204ENST00000629650 KDM2BQ8NHM5 1336 aa24.66■■□□□ 1.54
PPM1D-204ENST00000629650 CENPQQ7L2Z9 268 aaPredicted RBP24.66■■□□□ 1.54
PPM1D-204ENST00000629650 SIRT2Q8IXJ6 389 aa24.66■■□□□ 1.54
PPM1D-204ENST00000629650 JARID2Q92833 1246 aaPredicted RBP24.66■■□□□ 1.54
PPM1D-204ENST00000629650 BCL2L12Q9HB09 334 aa24.66■■□□□ 1.54
PPM1D-204ENST00000629650 NIP7Q9Y221 180 aaKnown RBP eCLIP24.66■■□□□ 1.54
PPM1D-204ENST00000629650 SUCLG2Q96I99 432 aa24.65■■□□□ 1.54
PPM1D-204ENST00000629650 CASP7P55210 303 aa24.64■■□□□ 1.53
PPM1D-204ENST00000629650 PARP10Q53GL7 1025 aa24.64■■□□□ 1.53
PPM1D-204ENST00000629650 RTL5Q5HYW3 569 aaPredicted RBP24.64■■□□□ 1.53
PPM1D-204ENST00000629650 PCCAP05165 728 aaPredicted RBP24.63■■□□□ 1.53
PPM1D-204ENST00000629650 ATP8B2P98198 1209 aa24.62■■□□□ 1.53
PPM1D-204ENST00000629650 MSL1Q68DK7 614 aa24.62■■□□□ 1.53
PPM1D-204ENST00000629650 ZBTB38Q8NAP3 1195 aaPredicted RBP24.62■■□□□ 1.53
PPM1D-204ENST00000629650 FLAD1Q8NFF5 587 aa24.62■■□□□ 1.53
PPM1D-204ENST00000629650 KAZALD1Q96I82 304 aa24.62■■□□□ 1.53
PPM1D-204ENST00000629650 HMMRO75330 724 aa24.61■■□□□ 1.53
PPM1D-204ENST00000629650 TBC1D9BQ66K14 1250 aa24.61■■□□□ 1.53
PPM1D-204ENST00000629650 FAM89AQ96GI7 184 aa24.61■■□□□ 1.53
PPM1D-204ENST00000629650 FHDC1Q9C0D6 1143 aaPredicted RBP24.61■■□□□ 1.53
PPM1D-204ENST00000629650 TRMT112Q9UI30 125 aaKnown RBP24.61■■□□□ 1.53
PPM1D-204ENST00000629650 COL24A1Q17RW2 1714 aa24.61■■□□□ 1.53
PPM1D-204ENST00000629650 SUSD4Q5VX71 490 aa24.61■■□□□ 1.53
PPM1D-204ENST00000629650 BICDL1Q6ZP65 573 aa24.61■■□□□ 1.53
PPM1D-204ENST00000629650 BICC1Q9H694 974 aaKnown RBP24.61■■□□□ 1.53
PPM1D-204ENST00000629650 POLD1P28340 1107 aa24.6■■□□□ 1.53
PPM1D-204ENST00000629650 PPP1R42Q7Z4L9 355 aa24.6■■□□□ 1.53
PPM1D-204ENST00000629650 PNMA6EA0A0J9YXQ4 647 aa24.59■■□□□ 1.53
PPM1D-204ENST00000629650 UTP14AQ9BVJ6 771 aaKnown RBP24.59■■□□□ 1.53
PPM1D-204ENST00000629650 CDHR2Q9BYE9 1310 aa24.59■■□□□ 1.53
PPM1D-204ENST00000629650 FAM177BA6PVY3 158 aa24.58■■□□□ 1.53
PPM1D-204ENST00000629650 GYS1P13807 737 aa24.58■■□□□ 1.53
PPM1D-204ENST00000629650 MTX1Q13505 466 aa24.58■■□□□ 1.53
PPM1D-204ENST00000629650 EPHA10Q5JZY3 1008 aa24.58■■□□□ 1.53
PPM1D-204ENST00000629650 SETDB2Q96T68 719 aa24.58■■□□□ 1.53
PPM1D-204ENST00000629650 SRGAP3O43295 1099 aa24.57■■□□□ 1.52
PPM1D-204ENST00000629650 SYT17Q9BSW7 474 aa24.57■■□□□ 1.52
PPM1D-204ENST00000629650 MYH3P11055 1940 aa24.57■■□□□ 1.52
PPM1D-204ENST00000629650 NTSR2O95665 410 aa24.56■■□□□ 1.52
PPM1D-204ENST00000629650 SYNE4Q8N205 404 aa24.56■■□□□ 1.52
PPM1D-204ENST00000629650 SSH3Q8TE77 659 aa24.56■■□□□ 1.52
PPM1D-204ENST00000629650 SH3TC1Q8TE82 1336 aa24.56■■□□□ 1.52
PPM1D-204ENST00000629650 LAMB2P55268 1798 aa24.55■■□□□ 1.52
PPM1D-204ENST00000629650 FOXO4P98177 505 aa24.55■■□□□ 1.52
PPM1D-204ENST00000629650 RABL6Q3YEC7 729 aaPredicted RBP24.55■■□□□ 1.52
PPM1D-204ENST00000629650 SMC5Q8IY18 1101 aa24.55■■□□□ 1.52
PPM1D-204ENST00000629650 KLHL34Q8N239 644 aa24.55■■□□□ 1.52
PPM1D-204ENST00000629650 GCC1Q96CN9 775 aa24.55■■□□□ 1.52
PPM1D-204ENST00000629650 DDX60Q8IY21 1712 aaKnown RBP24.54■■□□□ 1.52
PPM1D-204ENST00000629650 IRS4O14654 1257 aaPredicted RBP24.54■■□□□ 1.52
PPM1D-204ENST00000629650 POLA2Q14181 598 aa24.54■■□□□ 1.52
PPM1D-204ENST00000629650 PLA2G12BQ9BX93 195 aa24.54■■□□□ 1.52
PPM1D-204ENST00000629650 DCTPP1Q9H773 170 aa24.54■■□□□ 1.52
PPM1D-204ENST00000629650 NFIXQ14938 502 aa24.53■■□□□ 1.52
PPM1D-204ENST00000629650 CARMIL3Q8ND23 1372 aa24.53■■□□□ 1.52
PPM1D-204ENST00000629650 LMBR1LQ6UX01 489 aa24.52■■□□□ 1.52
PPM1D-204ENST00000629650 NYXQ9GZU5 481 aa24.52■■□□□ 1.52
PPM1D-204ENST00000629650 NBPF5PQ86XG9 351 aaPredicted RBP24.51■■□□□ 1.51
PPM1D-204ENST00000629650 NUTM1Q86Y26 1132 aa24.51■■□□□ 1.51
PPM1D-204ENST00000629650 PDE8AO60658 829 aa24.51■■□□□ 1.51
PPM1D-204ENST00000629650 CHMP3Q9Y3E7 222 aa24.51■■□□□ 1.51
PPM1D-204ENST00000629650 HSP90B1P14625 803 aaKnown RBP24.5■■□□□ 1.51
PPM1D-204ENST00000629650 GTF2E1P29083 439 aaPredicted RBP24.5■■□□□ 1.51
PPM1D-204ENST00000629650 TPTE2Q6XPS3 522 aa24.5■■□□□ 1.51
PPM1D-204ENST00000629650 NLGN1Q8N2Q7 840 aa24.5■■□□□ 1.51
PPM1D-204ENST00000629650 TM4SF1P30408 202 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms