RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 PPP1R42Q7Z4L9 355 aa11.36□□□□□ -0.59
CHD2-216ENST00000629104 NLRP10Q86W26 655 aa11.36□□□□□ -0.59
CHD2-216ENST00000629104 NUTM1Q86Y26 1132 aa11.36□□□□□ -0.59
CHD2-216ENST00000629104 PELP1Q8IZL8 1130 aaKnown RBP11.36□□□□□ -0.59
CHD2-216ENST00000629104 ISCA1Q9BUE6 129 aa11.36□□□□□ -0.59
CHD2-216ENST00000629104 ADCY9O60503 1353 aa11.36□□□□□ -0.59
CHD2-216ENST00000629104 ABCC12Q96J65 1359 aa11.36□□□□□ -0.59
CHD2-216ENST00000629104 LAMB2P55268 1798 aa11.36□□□□□ -0.59
CHD2-216ENST00000629104 RIC1Q4ADV7 1423 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 DDX60Q8IY21 1712 aaKnown RBP11.35□□□□□ -0.59
CHD2-216ENST00000629104 PI4KAP2A4QPH2 592 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 ATP5J2-PTCD1G3V325 749 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 YBX3P16989 372 aaKnown RBP eCLIP11.35□□□□□ -0.59
CHD2-216ENST00000629104 GTF2E1P29083 439 aaPredicted RBP11.35□□□□□ -0.59
CHD2-216ENST00000629104 ERFEQ4G0M1 354 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 C2CD5Q86YS7 1000 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 PI4KAP1Q8N8J0 262 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 ZNF428Q96B54 188 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 METTL22Q9BUU2 404 aaPredicted RBP11.35□□□□□ -0.59
CHD2-216ENST00000629104 UTP14AQ9BVJ6 771 aaKnown RBP11.35□□□□□ -0.59
CHD2-216ENST00000629104 PIM2Q9P1W9 311 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 WWC3Q9ULE0 1092 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 PDZRN3Q9UPQ7 1066 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 MAP3K2Q9Y2U5 619 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 CHD4Q14839 1912 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
CHD2-216ENST00000629104 H0YIN7 160 aa11.34□□□□□ -0.59
CHD2-216ENST00000629104 CT47B1P0C2W7 299 aaPredicted RBP11.34□□□□□ -0.59
CHD2-216ENST00000629104 TRIM28Q13263 835 aaKnown RBP11.34□□□□□ -0.59
CHD2-216ENST00000629104 FKBP5Q13451 457 aaPredicted RBP11.34□□□□□ -0.59
CHD2-216ENST00000629104 MYD88Q99836 296 aa11.34□□□□□ -0.59
CHD2-216ENST00000629104 KLRG2A4D1S0 409 aaPredicted RBP11.33□□□□□ -0.6
CHD2-216ENST00000629104 SRGNP10124 158 aa11.33□□□□□ -0.6
CHD2-216ENST00000629104 ALDH1L2Q3SY69 923 aa11.33□□□□□ -0.6
CHD2-216ENST00000629104 MRPL50Q8N5N7 158 aaKnown RBP11.33□□□□□ -0.6
CHD2-216ENST00000629104 SSH1Q8WYL5 1049 aa11.33□□□□□ -0.6
CHD2-216ENST00000629104 TRMT112Q9UI30 125 aaKnown RBP11.33□□□□□ -0.6
CHD2-216ENST00000629104 BCS1LQ9Y276 419 aa11.33□□□□□ -0.6
CHD2-216ENST00000629104 SLX4Q8IY92 1834 aa11.32□□□□□ -0.6
CHD2-216ENST00000629104 GRIN3BO60391 1043 aa11.32□□□□□ -0.6
CHD2-216ENST00000629104 DALRD3Q5D0E6 543 aaKnown RBP11.32□□□□□ -0.6
CHD2-216ENST00000629104 SLC10A5Q5PT55 438 aa11.32□□□□□ -0.6
CHD2-216ENST00000629104 CCDC191Q8NCU4 936 aa11.32□□□□□ -0.6
CHD2-216ENST00000629104 DNAAF4Q8WXU2 420 aa11.32□□□□□ -0.6
CHD2-216ENST00000629104 ZNF622Q969S3 477 aaKnown RBP eCLIP11.32□□□□□ -0.61e-7■■□□□ 12.3
CHD2-216ENST00000629104 MASTLQ96GX5 879 aa11.32□□□□□ -0.6
CHD2-216ENST00000629104 SH3TC1Q8TE82 1336 aa11.32□□□□□ -0.6
CHD2-216ENST00000629104 IGKV5-2P06315 115 aa11.31□□□□□ -0.6
CHD2-216ENST00000629104 NEXNQ0ZGT2 675 aa11.31□□□□□ -0.6
CHD2-216ENST00000629104 CRY2Q49AN0 593 aa11.31□□□□□ -0.6
CHD2-216ENST00000629104 STYK1Q6J9G0 422 aa11.31□□□□□ -0.6
CHD2-216ENST00000629104 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
CHD2-216ENST00000629104 TTLL6Q8N841 843 aa11.31□□□□□ -0.6
CHD2-216ENST00000629104 FAM89AQ96GI7 184 aa11.31□□□□□ -0.6
CHD2-216ENST00000629104 BCL2L13Q9BXK5 485 aa11.31□□□□□ -0.6
CHD2-216ENST00000629104 CWC25Q9NXE8 425 aaPredicted RBP11.31□□□□□ -0.6
CHD2-216ENST00000629104 U3KPZ7 1027 aaPredicted RBP11.31□□□□□ -0.6
CHD2-216ENST00000629104 MYH3P11055 1940 aa11.31□□□□□ -0.6
CHD2-216ENST00000629104 NEURL1BA8MQ27 555 aa11.3□□□□□ -0.6
CHD2-216ENST00000629104 F6X3S4 739 aa11.3□□□□□ -0.6
CHD2-216ENST00000629104 NPR1P16066 1061 aa11.3□□□□□ -0.6
CHD2-216ENST00000629104 CWF19L2Q2TBE0 894 aaKnown RBP11.3□□□□□ -0.6
CHD2-216ENST00000629104 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
CHD2-216ENST00000629104 ZBTB38Q8NAP3 1195 aaPredicted RBP11.3□□□□□ -0.6
CHD2-216ENST00000629104 CNKSR1Q969H4 720 aa11.3□□□□□ -0.6
CHD2-216ENST00000629104 NLRP3Q96P20 1036 aa11.3□□□□□ -0.6
CHD2-216ENST00000629104 SMC4Q9NTJ3 1288 aa11.3□□□□□ -0.6
CHD2-216ENST00000629104 PTPRCP08575 1304 aa11.3□□□□□ -0.6
CHD2-216ENST00000629104 PCCAP05165 728 aaPredicted RBP11.29□□□□□ -0.6
CHD2-216ENST00000629104 HCLS1P14317 486 aaPredicted RBP11.29□□□□□ -0.6
CHD2-216ENST00000629104 RARSP54136 660 aaKnown RBP11.29□□□□□ -0.6
CHD2-216ENST00000629104 RTL5Q5HYW3 569 aaPredicted RBP11.29□□□□□ -0.6
CHD2-216ENST00000629104 LINS1Q8NG48 757 aa11.29□□□□□ -0.6
CHD2-216ENST00000629104 TAF1P21675 1872 aa11.29□□□□□ -0.6
CHD2-216ENST00000629104 FER1L6Q2WGJ9 1857 aa11.29□□□□□ -0.6
CHD2-216ENST00000629104 SBF1O95248 1867 aa11.28□□□□□ -0.6
CHD2-216ENST00000629104 IRS4O14654 1257 aaPredicted RBP11.28□□□□□ -0.6
CHD2-216ENST00000629104 ALDH1B1P30837 517 aa11.28□□□□□ -0.6
CHD2-216ENST00000629104 HOXA10P31260 410 aaPredicted RBP11.28□□□□□ -0.6
CHD2-216ENST00000629104 BRPF1P55201 1214 aaPredicted RBP11.28□□□□□ -0.6
CHD2-216ENST00000629104 BEND3Q5T5X7 828 aa11.28□□□□□ -0.6
CHD2-216ENST00000629104 PRPF40BQ6NWY9 871 aaKnown RBP11.28□□□□□ -0.6
CHD2-216ENST00000629104 RPGRQ92834 1020 aaKnown RBP11.28□□□□□ -0.6
CHD2-216ENST00000629104 GCKRQ14397 625 aa11.27□□□□□ -0.61
CHD2-216ENST00000629104 JARID2Q92833 1246 aaPredicted RBP11.27□□□□□ -0.61
CHD2-216ENST00000629104 RBM17Q96I25 401 aaKnown RBP11.27□□□□□ -0.61
CHD2-216ENST00000629104 CRAMP1Q96RY5 1269 aa11.27□□□□□ -0.61
CHD2-216ENST00000629104 CDHR2Q9BYE9 1310 aa11.27□□□□□ -0.61
CHD2-216ENST00000629104 CCDC88AQ3V6T2 1871 aa11.27□□□□□ -0.61
CHD2-216ENST00000629104 H7C1W4 665 aa11.26□□□□□ -0.61
CHD2-216ENST00000629104 C21orf2O43822 256 aa11.26□□□□□ -0.61
CHD2-216ENST00000629104 HSP90B1P14625 803 aaKnown RBP11.26□□□□□ -0.61
CHD2-216ENST00000629104 SF3B3Q15393 1217 aaKnown RBP11.26□□□□□ -0.61
CHD2-216ENST00000629104 SLC4A10Q6U841 1118 aa11.26□□□□□ -0.61
CHD2-216ENST00000629104 ARHGAP27Q6ZUM4 889 aa11.26□□□□□ -0.61
CHD2-216ENST00000629104 NOB1Q9ULX3 412 aaKnown RBP11.26□□□□□ -0.61
CHD2-216ENST00000629104 PDE8AO60658 829 aa11.25□□□□□ -0.61
CHD2-216ENST00000629104 ALDH1L1O75891 902 aa11.25□□□□□ -0.61
CHD2-216ENST00000629104 UBE3BQ7Z3V4 1068 aa11.25□□□□□ -0.61
CHD2-216ENST00000629104 C7orf43Q8WVR3 580 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms