RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 CCDC27Q2M243 656 aa13.61□□□□□ -0.23
TMCO1-209ENST00000628579 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
TMCO1-209ENST00000628579 SLC51AQ86UW1 340 aa13.61□□□□□ -0.23
TMCO1-209ENST00000628579 NLRP10Q86W26 655 aa13.61□□□□□ -0.23
TMCO1-209ENST00000628579 TSPYL6Q8N831 410 aa13.61□□□□□ -0.23
TMCO1-209ENST00000628579 UTP14AQ9BVJ6 771 aaKnown RBP13.61□□□□□ -0.23
TMCO1-209ENST00000628579 TAOK3Q9H2K8 898 aa13.61□□□□□ -0.23
TMCO1-209ENST00000628579 LTBP3Q9NS15 1303 aa13.61□□□□□ -0.23
TMCO1-209ENST00000628579 TCIRG1Q13488 830 aa13.6□□□□□ -0.23
TMCO1-209ENST00000628579 SYNE4Q8N205 404 aa13.6□□□□□ -0.23
TMCO1-209ENST00000628579 HYPKQ9NX55 129 aa13.6□□□□□ -0.23
TMCO1-209ENST00000628579 DICER1Q9UPY3 1922 aaKnown RBP13.6□□□□□ -0.23
TMCO1-209ENST00000628579 KDM2BQ8NHM5 1336 aa13.6□□□□□ -0.23
TMCO1-209ENST00000628579 ZC3H4Q9UPT8 1303 aaKnown RBP13.6□□□□□ -0.23
TMCO1-209ENST00000628579 HOXA10P31260 410 aaPredicted RBP13.59□□□□□ -0.23
TMCO1-209ENST00000628579 CCDC93Q567U6 631 aa13.59□□□□□ -0.23
TMCO1-209ENST00000628579 HSP90AB3PQ58FF7 597 aa13.59□□□□□ -0.23
TMCO1-209ENST00000628579 SOGA3Q5TF21 947 aa13.59□□□□□ -0.23
TMCO1-209ENST00000628579 ANKRD13DQ6ZTN6 518 aa13.59□□□□□ -0.23
TMCO1-209ENST00000628579 PLBD2Q8NHP8 589 aa13.59□□□□□ -0.23
TMCO1-209ENST00000628579 RPGRQ92834 1020 aaKnown RBP13.59□□□□□ -0.23
TMCO1-209ENST00000628579 PHAXQ9H814 394 aaKnown RBP13.59□□□□□ -0.23
TMCO1-209ENST00000628579 RRAGCQ9HB90 399 aa13.59□□□□□ -0.23
TMCO1-209ENST00000628579 SALL2Q9Y467 1007 aaPredicted RBP13.59□□□□□ -0.23
TMCO1-209ENST00000628579 LAMB2P55268 1798 aa13.58□□□□□ -0.23
TMCO1-209ENST00000628579 SNED1Q8TER0 1413 aa13.58□□□□□ -0.24
TMCO1-209ENST00000628579 GLTPD2A6NH11 291 aa13.58□□□□□ -0.24
TMCO1-209ENST00000628579 HCLS1P14317 486 aaPredicted RBP13.58□□□□□ -0.24
TMCO1-209ENST00000628579 ALDH1B1P30837 517 aa13.58□□□□□ -0.24
TMCO1-209ENST00000628579 FAM9BQ8IZU0 186 aa13.58□□□□□ -0.24
TMCO1-209ENST00000628579 ATP5J2-PTCD1G3V325 749 aa13.57□□□□□ -0.24
TMCO1-209ENST00000628579 SLC10A5Q5PT55 438 aa13.57□□□□□ -0.24
TMCO1-209ENST00000628579 NLRP3Q96P20 1036 aa13.57□□□□□ -0.24
TMCO1-209ENST00000628579 ZNF277Q9NRM2 450 aaPredicted RBP13.57□□□□□ -0.24
TMCO1-209ENST00000628579 TRMT112Q9UI30 125 aaKnown RBP13.57□□□□□ -0.24
TMCO1-209ENST00000628579 SH3TC1Q8TE82 1336 aa13.57□□□□□ -0.24
TMCO1-209ENST00000628579 TCERG1O14776 1098 aaKnown RBP13.56□□□□□ -0.24
TMCO1-209ENST00000628579 TOMM70O94826 608 aa13.56□□□□□ -0.24
TMCO1-209ENST00000628579 FKBP4Q02790 459 aaKnown RBP eCLIP13.56□□□□□ -0.24
TMCO1-209ENST00000628579 RBM17Q96I25 401 aaKnown RBP13.56□□□□□ -0.24
TMCO1-209ENST00000628579 ISCA1Q9BUE6 129 aa13.56□□□□□ -0.24
TMCO1-209ENST00000628579 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
TMCO1-209ENST00000628579 DDX60Q8IY21 1712 aaKnown RBP13.56□□□□□ -0.24
TMCO1-209ENST00000628579 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
TMCO1-209ENST00000628579 RTL5Q5HYW3 569 aaPredicted RBP13.55□□□□□ -0.24
TMCO1-209ENST00000628579 CCDC30Q5VVM6 783 aa13.55□□□□□ -0.24
TMCO1-209ENST00000628579 RTKN2Q8IZC4 609 aa13.55□□□□□ -0.24
TMCO1-209ENST00000628579 FAM89AQ96GI7 184 aa13.55□□□□□ -0.24
TMCO1-209ENST00000628579 CRAMP1Q96RY5 1269 aa13.55□□□□□ -0.24
TMCO1-209ENST00000628579 ABCC4O15439 1325 aa13.55□□□□□ -0.24
TMCO1-209ENST00000628579 IL16Q14005 1332 aa13.55□□□□□ -0.24
TMCO1-209ENST00000628579 POTECB2RU33 542 aa13.54□□□□□ -0.24
TMCO1-209ENST00000628579 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
TMCO1-209ENST00000628579 HSPA6P17066 643 aa13.54□□□□□ -0.24
TMCO1-209ENST00000628579 GOLGA2Q08379 1002 aa13.54□□□□□ -0.24
TMCO1-209ENST00000628579 TWISTNBQ3B726 338 aaPredicted RBP13.54□□□□□ -0.24
TMCO1-209ENST00000628579 RIC3Q7Z5B4 369 aa13.54□□□□□ -0.24
TMCO1-209ENST00000628579 C16orf71Q8IYS4 520 aaPredicted RBP13.54□□□□□ -0.24
TMCO1-209ENST00000628579 FANCIQ9NVI1 1328 aa13.54□□□□□ -0.24
TMCO1-209ENST00000628579 TAF1P21675 1872 aa13.54□□□□□ -0.24
TMCO1-209ENST00000628579 COL4A5P29400 1685 aa13.53□□□□□ -0.24
TMCO1-209ENST00000628579 WDR90Q96KV7 1748 aa13.53□□□□□ -0.24
TMCO1-209ENST00000628579 DDNO94850 711 aaPredicted RBP13.53□□□□□ -0.24
TMCO1-209ENST00000628579 DPY19L2Q6NUT2 758 aa13.53□□□□□ -0.24
TMCO1-209ENST00000628579 RBM46Q8TBY0 533 aaKnown RBP13.53□□□□□ -0.24
TMCO1-209ENST00000628579 SPINK5Q9NQ38 1064 aaPredicted RBP13.53□□□□□ -0.24
TMCO1-209ENST00000628579 VEGFAP15692 232 aaPredicted RBP13.52□□□□□ -0.25
TMCO1-209ENST00000628579 IARSP41252 1262 aaKnown RBP13.52□□□□□ -0.25
TMCO1-209ENST00000628579 TRIM28Q13263 835 aaKnown RBP13.52□□□□□ -0.25
TMCO1-209ENST00000628579 WDR63Q8IWG1 891 aa13.52□□□□□ -0.25
TMCO1-209ENST00000628579 PSMD1Q99460 953 aa13.52□□□□□ -0.25
TMCO1-209ENST00000628579 MYD88Q99836 296 aa13.52□□□□□ -0.25
TMCO1-209ENST00000628579 ZNF541Q9H0D2 1346 aa13.52□□□□□ -0.25
TMCO1-209ENST00000628579 COL4A1P02462 1669 aa13.52□□□□□ -0.25
TMCO1-209ENST00000628579 CC2D2BQ6DHV5 1058 aa13.51□□□□□ -0.25
TMCO1-209ENST00000628579 G2E3Q7L622 706 aa13.51□□□□□ -0.25
TMCO1-209ENST00000628579 STK31Q9BXU1 1019 aa13.51□□□□□ -0.25
TMCO1-209ENST00000628579 ATP6V0A2Q9Y487 856 aa13.51□□□□□ -0.25
TMCO1-209ENST00000628579 DDX46Q7L014 1031 aaKnown RBP13.5□□□□□ -0.25
TMCO1-209ENST00000628579 JARID2Q92833 1246 aaPredicted RBP13.5□□□□□ -0.25
TMCO1-209ENST00000628579 METTL22Q9BUU2 404 aaPredicted RBP13.5□□□□□ -0.25
TMCO1-209ENST00000628579 MAP3K2Q9Y2U5 619 aa13.5□□□□□ -0.25
TMCO1-209ENST00000628579 PI4KAP2A4QPH2 592 aa13.49□□□□□ -0.25
TMCO1-209ENST00000628579 IRS4O14654 1257 aaPredicted RBP13.49□□□□□ -0.25
TMCO1-209ENST00000628579 DDX58O95786 925 aaKnown RBP13.49□□□□□ -0.25
TMCO1-209ENST00000628579 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
TMCO1-209ENST00000628579 EXOSC9Q06265 439 aaKnown RBP13.49□□□□□ -0.25
TMCO1-209ENST00000628579 GRAPQ13588 217 aa13.49□□□□□ -0.25
TMCO1-209ENST00000628579 KSR2Q6VAB6 950 aa13.49□□□□□ -0.25
TMCO1-209ENST00000628579 PI4KAP1Q8N8J0 262 aa13.49□□□□□ -0.25
TMCO1-209ENST00000628579 ZBTB38Q8NAP3 1195 aaPredicted RBP13.49□□□□□ -0.25
TMCO1-209ENST00000628579 GRAPLQ8TC17 118 aaPredicted RBP13.49□□□□□ -0.25
TMCO1-209ENST00000628579 CHMP4AQ9BY43 222 aa13.49□□□□□ -0.25
TMCO1-209ENST00000628579 FZD9O00144 591 aa13.48□□□□□ -0.25
TMCO1-209ENST00000628579 VAMP4O75379 141 aa13.48□□□□□ -0.25
TMCO1-209ENST00000628579 BBOX1O75936 387 aa13.48□□□□□ -0.25
TMCO1-209ENST00000628579 IGKV5-2P06315 115 aa13.48□□□□□ -0.25
TMCO1-209ENST00000628579 FSTL1Q12841 308 aa13.48□□□□□ -0.25
TMCO1-209ENST00000628579 SF3B3Q15393 1217 aaKnown RBP13.48□□□□□ -0.25
TMCO1-209ENST00000628579 CCDC191Q8NCU4 936 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms