RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 RFC4P35249 363 aa13.45□□□□□ -0.26
KCNMA1-225ENST00000626620 FRAT1Q92837 279 aaPredicted RBP13.45□□□□□ -0.26
KCNMA1-225ENST00000626620 COL11A2P13942 1736 aaPredicted RBP13.44□□□□□ -0.26
KCNMA1-225ENST00000626620 CWF19L2Q2TBE0 894 aaKnown RBP13.44□□□□□ -0.26
KCNMA1-225ENST00000626620 LINS1Q8NG48 757 aa13.44□□□□□ -0.26
KCNMA1-225ENST00000626620 NFIXQ14938 502 aa13.44□□□□□ -0.26
KCNMA1-225ENST00000626620 DZIP1LQ8IYY4 767 aaKnown RBP13.44□□□□□ -0.26
KCNMA1-225ENST00000626620 RIC1Q4ADV7 1423 aa13.44□□□□□ -0.26
KCNMA1-225ENST00000626620 POLRMTO00411 1230 aaKnown RBP13.44□□□□□ -0.26
KCNMA1-225ENST00000626620 NTSR2O95665 410 aa13.44□□□□□ -0.26
KCNMA1-225ENST00000626620 YBX3P16989 372 aaKnown RBP eCLIP13.44□□□□□ -0.26
KCNMA1-225ENST00000626620 RIC3Q7Z5B4 369 aa13.44□□□□□ -0.26
KCNMA1-225ENST00000626620 MYD88Q99836 296 aa13.44□□□□□ -0.26
KCNMA1-225ENST00000626620 C10orf71Q711Q0 1435 aa13.43□□□□□ -0.26
KCNMA1-225ENST00000626620 ZBTB7BO15156 539 aaPredicted RBP13.43□□□□□ -0.26
KCNMA1-225ENST00000626620 ZNF784Q8NCA9 323 aaPredicted RBP13.43□□□□□ -0.26
KCNMA1-225ENST00000626620 KAZALD1Q96I82 304 aa13.43□□□□□ -0.26
KCNMA1-225ENST00000626620 USP44Q9H0E7 712 aa13.43□□□□□ -0.26
KCNMA1-225ENST00000626620 SUSD4Q5VX71 490 aa13.43□□□□□ -0.26
KCNMA1-225ENST00000626620 CD2APQ9Y5K6 639 aa13.43□□□□□ -0.26
KCNMA1-225ENST00000626620 H7C1W4 665 aa13.43□□□□□ -0.26
KCNMA1-225ENST00000626620 ALDH1L1O75891 902 aa13.43□□□□□ -0.26
KCNMA1-225ENST00000626620 GCKRQ14397 625 aa13.43□□□□□ -0.26
KCNMA1-225ENST00000626620 ZNF330Q9Y3S2 320 aaPredicted RBP13.43□□□□□ -0.26
KCNMA1-225ENST00000626620 ATP5J2-PTCD1G3V325 749 aa13.42□□□□□ -0.26
KCNMA1-225ENST00000626620 CCDC191Q8NCU4 936 aa13.42□□□□□ -0.26
KCNMA1-225ENST00000626620 ZPR1O75312 459 aa13.42□□□□□ -0.26
KCNMA1-225ENST00000626620 CLUAP1Q96AJ1 413 aa13.42□□□□□ -0.26
KCNMA1-225ENST00000626620 CCT4P50991 539 aaKnown RBP13.42□□□□□ -0.26
KCNMA1-225ENST00000626620 MVPQ14764 893 aaKnown RBP13.42□□□□□ -0.26
KCNMA1-225ENST00000626620 HSP90AB3PQ58FF7 597 aa13.41□□□□□ -0.26
KCNMA1-225ENST00000626620 CARMIL3Q8ND23 1372 aa13.41□□□□□ -0.26
KCNMA1-225ENST00000626620 SYNE4Q8N205 404 aa13.41□□□□□ -0.26
KCNMA1-225ENST00000626620 A0A1B0GUL6 1792 aa13.41□□□□□ -0.26
KCNMA1-225ENST00000626620 ABCC12Q96J65 1359 aa13.4□□□□□ -0.26
KCNMA1-225ENST00000626620 NBPF7P0C2Y1 421 aaPredicted RBP13.4□□□□□ -0.26
KCNMA1-225ENST00000626620 NLGN1Q8N2Q7 840 aa13.4□□□□□ -0.26
KCNMA1-225ENST00000626620 SRCIN1Q9C0H9 1055 aa13.4□□□□□ -0.26
KCNMA1-225ENST00000626620 POLD1P28340 1107 aa13.4□□□□□ -0.27
KCNMA1-225ENST00000626620 SLC10A5Q5PT55 438 aa13.4□□□□□ -0.27
KCNMA1-225ENST00000626620 ZBTB40Q9NUA8 1239 aa13.4□□□□□ -0.27
KCNMA1-225ENST00000626620 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.27
KCNMA1-225ENST00000626620 GPTP24298 496 aa13.39□□□□□ -0.27
KCNMA1-225ENST00000626620 NIP7Q9Y221 180 aaKnown RBP eCLIP13.39□□□□□ -0.27
KCNMA1-225ENST00000626620 TAF1P21675 1872 aa13.39□□□□□ -0.27
KCNMA1-225ENST00000626620 CDHR2Q9BYE9 1310 aa13.39□□□□□ -0.27
KCNMA1-225ENST00000626620 SBF1O95248 1867 aa13.39□□□□□ -0.27
KCNMA1-225ENST00000626620 PCCAP05165 728 aaPredicted RBP13.39□□□□□ -0.27
KCNMA1-225ENST00000626620 PARP10Q53GL7 1025 aa13.39□□□□□ -0.27
KCNMA1-225ENST00000626620 ZBTB38Q8NAP3 1195 aaPredicted RBP13.39□□□□□ -0.27
KCNMA1-225ENST00000626620 MEIS3Q99687 375 aa13.39□□□□□ -0.27
KCNMA1-225ENST00000626620 KLRG2A4D1S0 409 aaPredicted RBP13.38□□□□□ -0.27
KCNMA1-225ENST00000626620 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.38□□□□□ -0.27
KCNMA1-225ENST00000626620 PLA2G12BQ9BX93 195 aa13.38□□□□□ -0.27
KCNMA1-225ENST00000626620 CWC25Q9NXE8 425 aaPredicted RBP13.38□□□□□ -0.27
KCNMA1-225ENST00000626620 COG6Q9Y2V7 657 aa13.38□□□□□ -0.27
KCNMA1-225ENST00000626620 SLC4A10Q6U841 1118 aa13.38□□□□□ -0.27
KCNMA1-225ENST00000626620 CRBNQ96SW2 442 aa13.38□□□□□ -0.27
KCNMA1-225ENST00000626620 FOXO4P98177 505 aa13.38□□□□□ -0.27
KCNMA1-225ENST00000626620 MSL1Q68DK7 614 aa13.37□□□□□ -0.27
KCNMA1-225ENST00000626620 GRM8O00222 908 aa13.37□□□□□ -0.27
KCNMA1-225ENST00000626620 EPHA10Q5JZY3 1008 aa13.37□□□□□ -0.27
KCNMA1-225ENST00000626620 PRR5LQ6MZQ0 368 aa13.37□□□□□ -0.27
KCNMA1-225ENST00000626620 MS4A1P11836 297 aa13.37□□□□□ -0.27
KCNMA1-225ENST00000626620 C3orf67Q6ZVT6 689 aa13.37□□□□□ -0.27
KCNMA1-225ENST00000626620 LRRC37AA6NMS7 1700 aa13.37□□□□□ -0.27
KCNMA1-225ENST00000626620 MMP10P09238 476 aa13.36□□□□□ -0.27
KCNMA1-225ENST00000626620 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
KCNMA1-225ENST00000626620 IRX6P78412 446 aaPredicted RBP13.36□□□□□ -0.27
KCNMA1-225ENST00000626620 NEXNQ0ZGT2 675 aa13.36□□□□□ -0.27
KCNMA1-225ENST00000626620 ERFEQ4G0M1 354 aa13.36□□□□□ -0.27
KCNMA1-225ENST00000626620 ANKRD44Q8N8A2 993 aa13.36□□□□□ -0.27
KCNMA1-225ENST00000626620 SERPINB2P05120 415 aa13.36□□□□□ -0.27
KCNMA1-225ENST00000626620 RABL6Q3YEC7 729 aaPredicted RBP13.36□□□□□ -0.27
KCNMA1-225ENST00000626620 SUCLG2Q96I99 432 aa13.36□□□□□ -0.27
KCNMA1-225ENST00000626620 JARID2Q92833 1246 aaPredicted RBP13.35□□□□□ -0.27
KCNMA1-225ENST00000626620 FAM89AQ96GI7 184 aa13.35□□□□□ -0.27
KCNMA1-225ENST00000626620 UTP14AQ9BVJ6 771 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-225ENST00000626620 SPEF2Q9C093 1822 aa13.35□□□□□ -0.27
KCNMA1-225ENST00000626620 LTBP1Q14766 1721 aa13.35□□□□□ -0.27
KCNMA1-225ENST00000626620 CSF1RP07333 972 aa13.35□□□□□ -0.27
KCNMA1-225ENST00000626620 EXOC6Q8TAG9 804 aa13.35□□□□□ -0.27
KCNMA1-225ENST00000626620 FTSJ3Q8IY81 847 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-225ENST00000626620 BICDL1Q6ZP65 573 aa13.34□□□□□ -0.27
KCNMA1-225ENST00000626620 NUTM1Q86Y26 1132 aa13.34□□□□□ -0.27
KCNMA1-225ENST00000626620 SIRT2Q8IXJ6 389 aa13.34□□□□□ -0.27
KCNMA1-225ENST00000626620 DDX19BQ9UMR2 479 aa13.34□□□□□ -0.27
KCNMA1-225ENST00000626620 KCNA3P22001 575 aa13.34□□□□□ -0.27
KCNMA1-225ENST00000626620 MTX1Q13505 466 aa13.34□□□□□ -0.27
KCNMA1-225ENST00000626620 CRY2Q49AN0 593 aa13.34□□□□□ -0.27
KCNMA1-225ENST00000626620 PPP1R42Q7Z4L9 355 aa13.34□□□□□ -0.27
KCNMA1-225ENST00000626620 ITPRIPQ8IWB1 547 aa13.34□□□□□ -0.27
KCNMA1-225ENST00000626620 RTL9Q8NET4 1388 aa13.33□□□□□ -0.27
KCNMA1-225ENST00000626620 UBE3BQ7Z3V4 1068 aa13.33□□□□□ -0.28
KCNMA1-225ENST00000626620 NPM2Q86SE8 214 aaKnown RBP13.33□□□□□ -0.28
KCNMA1-225ENST00000626620 SH3TC1Q8TE82 1336 aa13.33□□□□□ -0.28
KCNMA1-225ENST00000626620 CACNA1SQ13698 1873 aa13.33□□□□□ -0.28
KCNMA1-225ENST00000626620 NYXQ9GZU5 481 aa13.33□□□□□ -0.28
KCNMA1-225ENST00000626620 TRMT112Q9UI30 125 aaKnown RBP13.33□□□□□ -0.28
KCNMA1-225ENST00000626620 MSH5O43196 834 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms