RNA–Protein interactions for RNA: ENST00000623882.3

CERS1-204, Transcript of ceramide synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CERS1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERS1-204ENST00000623882 GPT2Q8TD30 523 aa28.99■■■□□ 2.23
CERS1-204ENST00000623882 TTC14Q96N46 770 aa28.99■■■□□ 2.23
CERS1-204ENST00000623882 EDC3Q96F86 508 aaKnown RBP28.98■■■□□ 2.23
CERS1-204ENST00000623882 NMIQ13287 307 aaPredicted RBP28.98■■■□□ 2.23
CERS1-204ENST00000623882 RBM27Q9P2N5 1060 aaKnown RBP28.98■■■□□ 2.23
CERS1-204ENST00000623882 WDR17Q8IZU2 1322 aa28.98■■■□□ 2.23
CERS1-204ENST00000623882 PKD1L3Q7Z443 1732 aa28.97■■■□□ 2.23
CERS1-204ENST00000623882 RUFY3Q7L099 469 aa28.97■■■□□ 2.23
CERS1-204ENST00000623882 STRN4Q9NRL3 753 aa28.97■■■□□ 2.23
CERS1-204ENST00000623882 NSFL1CQ9UNZ2 370 aaKnown RBP28.97■■■□□ 2.23
CERS1-204ENST00000623882 RFX5P48382 616 aaPredicted RBP28.96■■■□□ 2.23
CERS1-204ENST00000623882 PTPN12Q05209 780 aaKnown RBP28.96■■■□□ 2.23
CERS1-204ENST00000623882 SLAIN2Q9P270 581 aa28.96■■■□□ 2.23
CERS1-204ENST00000623882 NDUFB9Q9Y6M9 179 aa28.96■■■□□ 2.23
CERS1-204ENST00000623882 XIRP1Q702N8 1843 aaKnown RBP28.96■■■□□ 2.23
CERS1-204ENST00000623882 TFCP2Q12800 502 aa28.95■■■□□ 2.23
CERS1-204ENST00000623882 TTLL7Q6ZT98 887 aa28.95■■■□□ 2.23
CERS1-204ENST00000623882 FAM43AQ8N2R8 423 aa28.95■■■□□ 2.23
CERS1-204ENST00000623882 ISY1Q9ULR0 285 aaKnown RBP28.95■■■□□ 2.23
CERS1-204ENST00000623882 A1BGP04217 495 aa28.95■■■□□ 2.22
CERS1-204ENST00000623882 ZNF335Q9H4Z2 1342 aaPredicted RBP28.94■■■□□ 2.22
CERS1-204ENST00000623882 ABCC6O95255 1503 aa28.94■■■□□ 2.22
CERS1-204ENST00000623882 JAKMIP1Q96N16 626 aaKnown RBP28.94■■■□□ 2.22
CERS1-204ENST00000623882 FSD1Q9BTV5 496 aa28.94■■■□□ 2.22
CERS1-204ENST00000623882 RRAGDQ9NQL2 400 aaPredicted RBP28.94■■■□□ 2.22
CERS1-204ENST00000623882 A0A0D9SFI3 127 aa28.94■■■□□ 2.22
CERS1-204ENST00000623882 PLBD2Q8NHP8 589 aa28.94■■■□□ 2.22
CERS1-204ENST00000623882 COL9A3Q14050 684 aaPredicted RBP28.93■■■□□ 2.22
CERS1-204ENST00000623882 COPRSQ9NQ92 184 aa28.93■■■□□ 2.22
CERS1-204ENST00000623882 PCDH11XQ9BZA7 1347 aa28.93■■■□□ 2.22
CERS1-204ENST00000623882 PCDH11YQ9BZA8 1340 aa28.93■■■□□ 2.22
CERS1-204ENST00000623882 LARGE1O95461 756 aa28.93■■■□□ 2.22
CERS1-204ENST00000623882 ZSCAN23Q3MJ62 389 aa28.93■■■□□ 2.22
CERS1-204ENST00000623882 CCDC171Q6TFL3 1326 aa28.93■■■□□ 2.22
CERS1-204ENST00000623882 CCDC9Q9Y3X0 531 aaKnown RBP28.92■■■□□ 2.22
CERS1-204ENST00000623882 DBNLQ9UJU6 430 aaKnown RBP28.92■■■□□ 2.22
CERS1-204ENST00000623882 CHMP3Q9Y3E7 222 aa28.92■■■□□ 2.22
CERS1-204ENST00000623882 RBM8AQ9Y5S9 174 aaKnown RBP28.91■■■□□ 2.22
CERS1-204ENST00000623882 NECTIN1Q15223 517 aa28.91■■■□□ 2.22
CERS1-204ENST00000623882 LMBR1LQ6UX01 489 aa28.91■■■□□ 2.22
CERS1-204ENST00000623882 LIMCH1Q9UPQ0 1083 aa28.91■■■□□ 2.22
CERS1-204ENST00000623882 KCNJ4P48050 445 aa28.9■■■□□ 2.22
CERS1-204ENST00000623882 CASP7P55210 303 aa28.9■■■□□ 2.22
CERS1-204ENST00000623882 DNAJC5Q9H3Z4 198 aa28.9■■■□□ 2.22
CERS1-204ENST00000623882 GDPD2Q9HCC8 539 aa28.9■■■□□ 2.22
CERS1-204ENST00000623882 SOS2Q07890 1332 aaPredicted RBP28.9■■■□□ 2.22
CERS1-204ENST00000623882 GLI3P10071 1580 aa28.9■■■□□ 2.22
CERS1-204ENST00000623882 CHGBP05060 677 aa28.9■■■□□ 2.22
CERS1-204ENST00000623882 RABL6Q3YEC7 729 aaPredicted RBP28.9■■■□□ 2.22
CERS1-204ENST00000623882 TNNI3KQ59H18 835 aa28.89■■■□□ 2.22
CERS1-204ENST00000623882 ZBTB3Q9H5J0 574 aa28.89■■■□□ 2.22
CERS1-204ENST00000623882 FPGT-TNNI3KV9GXZ4 949 aa28.89■■■□□ 2.22
CERS1-204ENST00000623882 AFDNP55196 1824 aaKnown RBP28.89■■■□□ 2.22
CERS1-204ENST00000623882 IL2RBP14784 551 aa28.88■■■□□ 2.21
CERS1-204ENST00000623882 PDRG1Q9NUG6 133 aa28.88■■■□□ 2.21
CERS1-204ENST00000623882 COL5A2P05997 1499 aaPredicted RBP28.88■■■□□ 2.21
CERS1-204ENST00000623882 ARFGEF2Q9Y6D5 1785 aa28.88■■■□□ 2.21
CERS1-204ENST00000623882 CREB3L3Q68CJ9 461 aa28.88■■■□□ 2.21
CERS1-204ENST00000623882 ZNF589Q86UQ0 364 aaPredicted RBP28.87■■■□□ 2.21
CERS1-204ENST00000623882 TMEM63CQ9P1W3 806 aa28.87■■■□□ 2.21
CERS1-204ENST00000623882 TAF6LQ9Y6J9 622 aa28.87■■■□□ 2.21
CERS1-204ENST00000623882 MAP4K1Q92918 833 aa28.87■■■□□ 2.21
CERS1-204ENST00000623882 DBNDD2Q9BQY9 259 aa28.87■■■□□ 2.21
CERS1-204ENST00000623882 RPAP1Q9BWH6 1393 aaPredicted RBP28.87■■■□□ 2.21
CERS1-204ENST00000623882 ERVV-2B6SEH9 535 aa28.86■■■□□ 2.21
CERS1-204ENST00000623882 EVA1CP58658 441 aa28.85■■■□□ 2.21
CERS1-204ENST00000623882 CCDC83Q8IWF9 413 aa28.85■■■□□ 2.21
CERS1-204ENST00000623882 ZSWIM6Q9HCJ5 1215 aa28.85■■■□□ 2.21
CERS1-204ENST00000623882 PLEKHG2Q9H7P9 1386 aa28.85■■■□□ 2.21
CERS1-204ENST00000623882 ZNF445P59923 1031 aa28.85■■■□□ 2.21
CERS1-204ENST00000623882 FOXO4P98177 505 aa28.85■■■□□ 2.21
CERS1-204ENST00000623882 CYP46A1Q9Y6A2 500 aa28.85■■■□□ 2.21
CERS1-204ENST00000623882 HIP1O00291 1037 aa28.84■■■□□ 2.21
CERS1-204ENST00000623882 KCNB2Q92953 911 aa28.84■■■□□ 2.21
CERS1-204ENST00000623882 TCEANC2Q96MN5 208 aa28.84■■■□□ 2.21
CERS1-204ENST00000623882 DNAJC2Q99543 621 aaKnown RBP28.84■■■□□ 2.21
CERS1-204ENST00000623882 ZNF330Q9Y3S2 320 aaPredicted RBP28.84■■■□□ 2.21
CERS1-204ENST00000623882 ZKSCAN1P17029 563 aaPredicted RBP28.84■■■□□ 2.21
CERS1-204ENST00000623882 CARD10Q9BWT7 1032 aa28.84■■■□□ 2.21
CERS1-204ENST00000623882 H7C1W4 665 aa28.83■■■□□ 2.21
CERS1-204ENST00000623882 SLC27A2O14975 620 aa28.83■■■□□ 2.21
CERS1-204ENST00000623882 NASPP49321 788 aaPredicted RBP28.83■■■□□ 2.21
CERS1-204ENST00000623882 WDR33Q9C0J8 1336 aaKnown RBP28.83■■■□□ 2.21
CERS1-204ENST00000623882 PRIM1P49642 420 aaKnown RBP28.83■■■□□ 2.21
CERS1-204ENST00000623882 TPRNQ4KMQ1 711 aa28.82■■■□□ 2.2
CERS1-204ENST00000623882 VPS53Q5VIR6 699 aa28.82■■■□□ 2.2
CERS1-204ENST00000623882 ATP5JP18859 108 aa28.82■■■□□ 2.2
CERS1-204ENST00000623882 GADD45BO75293 160 aaPredicted RBP28.81■■■□□ 2.2
CERS1-204ENST00000623882 CWC25Q9NXE8 425 aaPredicted RBP28.81■■■□□ 2.2
CERS1-204ENST00000623882 SMC3Q9UQE7 1217 aa28.81■■■□□ 2.2
CERS1-204ENST00000623882 SYT1P21579 422 aa28.81■■■□□ 2.2
CERS1-204ENST00000623882 NKX1-1Q15270 411 aaPredicted RBP28.81■■■□□ 2.2
CERS1-204ENST00000623882 NECAB1Q8N987 351 aa28.81■■■□□ 2.2
CERS1-204ENST00000623882 SYCE3A1L190 88 aa28.8■■■□□ 2.2
CERS1-204ENST00000623882 ZNF594Q96JF6 807 aaPredicted RBP28.8■■■□□ 2.2
CERS1-204ENST00000623882 TM6SF1Q9BZW5 370 aa28.8■■■□□ 2.2
CERS1-204ENST00000623882 PARP4Q9UKK3 1724 aaKnown RBP28.8■■■□□ 2.2
CERS1-204ENST00000623882 SEC62Q99442 399 aaKnown RBP28.8■■■□□ 2.2
CERS1-204ENST00000623882 RBSNQ9H1K0 784 aa28.8■■■□□ 2.2
CERS1-204ENST00000623882 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms